Gene annotation
Transcriptome id Sobic.007G144100.1
Synonym EIF3C, EIF3C-1, ATEIF3C-1, Sb07g021915, ATTIF3C1, TIF3C1
Functional annotation eukaryotic translation initiation factor 3 subunit C, putative, expressed
UniProt C6JSN8 , C5YLN6
Pfam PF01399 PF05470
Panther DB PTHR13937 PTHR13937:SF0
NCBI CDD -
KEGG Orthology K03252; translation initiation factor 3 subunit C
Gene Ontology GO:0005515; protein binding GO:0006413translational initiation GO:0005852eukaryotic translation initiation factor 3 complex GO:0003743translation initiation factor activity


Orthologs (automatic annotation)
TAIR AT3G56150 : eukaryotic translation initiation factor 3C
RAP-DB (Rice) LOC_Os07g03230.2 : eukaryotic translation initiation factor 3 subunit C, putative, expressed
MaizeGDB (Corn) Zm00025a010305 , Zm00025a009641
Brachypodium KQJ90313 , KQJ90306
Barley HORVU5Hr1G063770.4 , HORVU5Hr1G063770.2 , HORVU5Hr1G063770.3 , HORVU5Hr1G063770.1
Wheat TraesCS5D02G228100 , TraesCS5B02G219100 , TraesCS5A02G220000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G258100 dynamin family protein, putative, expressed -
2 Sobic.003G352900 OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
3 Sobic.001G076600 hydrolase, acting on carbon-nitrogen, putative, expressed -
4 Sobic.003G217800 ras-related protein, putative, expressed K07936: GTP-binding nuclear protein Ran
5 Sobic.010G058300 expressed protein -
6 Sobic.001G506400 expressed protein -
7 Sobic.002G299500 expressed protein -
8 Sobic.004G045632 - -
9 Sobic.004G038400 fruit bromelain precursor, putative, expressed -
10 Sobic.009G002100 expressed protein -
11 Sobic.004G168900 elongation factor Tu family protein, putative, expressed K14536: ribosome assembly protein 1
12 Sobic.010G263400 expressed protein -
13 Sobic.009G121200 stromal membrane-associated protein, putative, expressed K12486: stromal membrane-associated protein
14 Sobic.010G266600 calcium-dependent protein kinase CPK1 adapter protein 2, putative, expressed -
15 Sobic.008G007600 - -
16 Sobic.001G034200 60S ribosomal protein L36-2, putative, expressed K02920: RP-L36e, large subunit ribosomal protein L36e
17 Sobic.007G063800 - -
18 Sobic.002G243400 transporter, monovalent cation:proton antiporter-2 family, putative, expressed K14724: SLC9A8, solute carrier family 9 (sodium/hydrogen exchanger), member 8
19 Sobic.010G038300 OsFBDUF33 - F-box and DUF domain containing protein, expressed -
20 Sobic.002G080450 - -


Gene co-expression network
sample Sobic007G144100 Sobic007G144100 Sobic003G258100 Sobic003G258100 Sobic007G144100--Sobic003G258100 Sobic003G352900 Sobic003G352900 Sobic007G144100--Sobic003G352900 Sobic001G076600 Sobic001G076600 Sobic007G144100--Sobic001G076600 Sobic003G217800 Sobic003G217800 Sobic007G144100--Sobic003G217800 Sobic010G058300 Sobic010G058300 Sobic007G144100--Sobic010G058300 Sobic001G506400 Sobic001G506400 Sobic007G144100--Sobic001G506400 Sobic002G299500 Sobic002G299500 Sobic007G144100--Sobic002G299500 Sobic004G045632 Sobic004G045632 Sobic007G144100--Sobic004G045632 Sobic004G038400 Sobic004G038400 Sobic007G144100--Sobic004G038400 Sobic003G258100--Sobic007G144100 Sobic003G258100--Sobic003G217800 Sobic010G263400 Sobic010G263400 Sobic003G258100--Sobic010G263400 Sobic003G258100--Sobic001G076600 Sobic003G258100--Sobic003G352900 Sobic003G258100--Sobic001G506400 Sobic007G060100 Sobic007G060100 Sobic003G258100--Sobic007G060100 Sobic003G258100--Sobic002G299500 Sobic003G018000 Sobic003G018000 Sobic003G258100--Sobic003G018000 Sobic003G352900--Sobic007G144100 Sobic003G352900--Sobic002G299500 Sobic003G352900--Sobic001G076600 Sobic003G376900 Sobic003G376900 Sobic003G352900--Sobic003G376900 Sobic009G201000 Sobic009G201000 Sobic003G352900--Sobic009G201000 Sobic005G045800 Sobic005G045800 Sobic003G352900--Sobic005G045800 Sobic009G163100 Sobic009G163100 Sobic003G352900--Sobic009G163100 Sobic001G385300 Sobic001G385300 Sobic003G352900--Sobic001G385300 Sobic008G007600 Sobic008G007600 Sobic003G352900--Sobic008G007600 Sobic001G076600--Sobic003G352900 Sobic001G076600--Sobic007G144100 Sobic008G166100 Sobic008G166100 Sobic001G076600--Sobic008G166100 Sobic001G076600--Sobic004G038400 Sobic001G076600--Sobic002G299500 Sobic001G076600--Sobic004G045632 Sobic001G076600--Sobic003G258100 Sobic005G173700 Sobic005G173700 Sobic001G076600--Sobic005G173700 Sobic001G076600--Sobic003G376900 Sobic003G217800--Sobic007G144100 Sobic003G217800--Sobic003G258100 Sobic003G217800--Sobic003G352900 Sobic003G217800--Sobic002G299500 Sobic003G217800--Sobic003G018000 Sobic001G485700 Sobic001G485700 Sobic003G217800--Sobic001G485700 Sobic009G220700 Sobic009G220700 Sobic003G217800--Sobic009G220700 Sobic004G062600 Sobic004G062600 Sobic003G217800--Sobic004G062600 Sobic003G217800--Sobic010G263400 Sobic009G202000 Sobic009G202000 Sobic010G058300--Sobic009G202000 Sobic010G058300--Sobic004G045632 Sobic009G002100 Sobic009G002100 Sobic010G058300--Sobic009G002100 Sobic001G432200 Sobic001G432200 Sobic010G058300--Sobic001G432200 Sobic010G058300--Sobic002G299500 Sobic004G250800 Sobic004G250800 Sobic010G058300--Sobic004G250800 Sobic010G058300--Sobic007G144100 Sobic002G243400 Sobic002G243400 Sobic010G058300--Sobic002G243400 Sobic001G322400 Sobic001G322400 Sobic010G058300--Sobic001G322400 Sobic001G506400--Sobic007G144100 Sobic001G506400--Sobic003G258100 Sobic001G034200 Sobic001G034200 Sobic001G506400--Sobic001G034200 Sobic001G506400--Sobic004G038400 Sobic001G506400--Sobic001G076600 Sobic007G048900 Sobic007G048900 Sobic001G506400--Sobic007G048900 Sobic001G506400--Sobic003G352900 Sobic004G168900 Sobic004G168900 Sobic001G506400--Sobic004G168900 Sobic010G038300 Sobic010G038300 Sobic001G506400--Sobic010G038300 Sobic008G171900 Sobic008G171900 Sobic002G299500--Sobic008G171900 Sobic002G299500--Sobic003G376900 Sobic002G299500--Sobic009G163100 Sobic005G020600 Sobic005G020600 Sobic002G299500--Sobic005G020600 Sobic002G299500--Sobic008G007600 Sobic002G299500--Sobic003G352900 Sobic002G299500--Sobic004G250800 Sobic002G299500--Sobic009G202000 Sobic001G072000 Sobic001G072000 Sobic002G299500--Sobic001G072000 Sobic004G045632--Sobic010G058300 Sobic004G045632--Sobic007G144100 Sobic004G045632--Sobic001G076600 Sobic004G045632--Sobic008G166100 Sobic004G045632--Sobic004G038400 Sobic004G045632--Sobic009G002100 Sobic004G045632--Sobic002G243400 Sobic004G045632--Sobic003G352900 Sobic010G027100 Sobic010G027100 Sobic004G045632--Sobic010G027100 Sobic004G038400--Sobic005G173700 Sobic009G048700 Sobic009G048700 Sobic004G038400--Sobic009G048700 Sobic004G038400--Sobic001G076600 Sobic004G038400--Sobic004G168900 Sobic003G005700 Sobic003G005700 Sobic004G038400--Sobic003G005700 Sobic004G038400--Sobic007G144100 Sobic004G038400--Sobic002G243400 Sobic008G056600 Sobic008G056600 Sobic004G038400--Sobic008G056600 Sobic004G038400--Sobic009G002100
Octagon: transcription factors


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