Gene annotation
Transcriptome id Sobic.009G121200.1
Synonym Sb09g018900
Functional annotation stromal membrane-associated protein, putative, expressed
UniProt C5YXD0
Pfam PF00168 PF01412
Panther DB PTHR23180 PTHR23180:SF272
NCBI CDD KOG1030; Predicted Ca2+-dependent phospholipid-binding protein
KEGG Orthology K12486; stromal membrane-associated protein
Gene Ontology GO:0005515; protein binding GO:0005096GTPase activator activity


Orthologs (automatic annotation)
TAIR AT3G07940 : Calcium-dependent ARF-type GTPase activating protein family
RAP-DB (Rice) LOC_Os05g31720.1 : stromal membrane-associated protein, putative, expressed
MaizeGDB (Corn) Zm00025a043515
Brachypodium -
Barley -
Wheat TraesCS1D02G239400 , TraesCS1D02G239400 , TraesCS1B02G251400 , TraesCS1A02G239200 , TraesCS1D02G239400
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G057300 expressed protein -
2 Sobic.003G191350 - -
3 Sobic.004G328500 expressed protein -
4 Sobic.003G407700 dnaJ domain containing protein, expressed -
5 Sobic.001G165901 - -
6 Sobic.004G052600 - -
7 Sobic.010G073900 expressed protein -
8 Sobic.007G081100 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
9 Sobic.002G364700 ZOS7-11 - C2H2 zinc finger protein, expressed -
10 Sobic.002G088600 glucose-1-phosphate adenylyltransferase large subunit, putative, expressed K00975: glucose-1-phosphate adenylyltransferase
11 Sobic.001G432200 pleckstrin homology domain-containing protein-related taxo, putative, expressed -
12 Sobic.003G191200 expressed protein -
13 Sobic.002G307400 MATH domain containing protein, expressed -
14 Sobic.002G204500 Phospholipase D alpha 2 PLD Alpha 2 (At)(PubMedID : 27208977)@phospholipase D, putative, expressed K01115: phospholipase D1/2
15 Sobic.003G151400 protein kinase, putative, expressed K13436: pto-interacting protein 1
16 Sobic.007G031200 - -
17 Sobic.001G538425 - -
18 Sobic.007G198900 MBTB32 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
19 Sobic.003G070400 expressed protein -
20 Sobic.007G082100 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein


Gene co-expression network
sample Sobic009G121200 Sobic009G121200 Sobic004G057300 Sobic004G057300 Sobic009G121200--Sobic004G057300 Sobic003G191350 Sobic003G191350 Sobic009G121200--Sobic003G191350 Sobic004G328500 Sobic004G328500 Sobic009G121200--Sobic004G328500 Sobic003G407700 Sobic003G407700 Sobic009G121200--Sobic003G407700 Sobic001G165901 Sobic001G165901 Sobic009G121200--Sobic001G165901 Sobic004G052600 Sobic004G052600 Sobic009G121200--Sobic004G052600 Sobic010G073900 Sobic010G073900 Sobic009G121200--Sobic010G073900 Sobic007G081100 Sobic007G081100 Sobic009G121200--Sobic007G081100 Sobic002G364700 Sobic002G364700 Sobic009G121200--Sobic002G364700 Sobic003G191200 Sobic003G191200 Sobic004G057300--Sobic003G191200 Sobic004G057300--Sobic004G052600 Sobic007G082100 Sobic007G082100 Sobic004G057300--Sobic007G082100 Sobic004G057300--Sobic007G081100 Sobic007G031200 Sobic007G031200 Sobic004G057300--Sobic007G031200 Sobic007G198900 Sobic007G198900 Sobic004G057300--Sobic007G198900 Sobic001G538425 Sobic001G538425 Sobic004G057300--Sobic001G538425 Sobic010G123800 Sobic010G123800 Sobic004G057300--Sobic010G123800 Sobic005G058300 Sobic005G058300 Sobic004G057300--Sobic005G058300 Sobic010G257800 Sobic010G257800 Sobic003G191350--Sobic010G257800 Sobic008G168932 Sobic008G168932 Sobic003G191350--Sobic008G168932 Sobic005G185750 Sobic005G185750 Sobic003G191350--Sobic005G185750 Sobic004G289900 Sobic004G289900 Sobic003G191350--Sobic004G289900 Sobic001G513400 Sobic001G513400 Sobic003G191350--Sobic001G513400 Sobic005G092100 Sobic005G092100 Sobic003G191350--Sobic005G092100 Sobic002G128700 Sobic002G128700 Sobic003G191350--Sobic002G128700 Sobic001G539880 Sobic001G539880 Sobic003G191350--Sobic001G539880 Sobic010G271600 Sobic010G271600 Sobic003G191350--Sobic010G271600 Sobic001G294500 Sobic001G294500 Sobic004G328500--Sobic001G294500 Sobic004G177900 Sobic004G177900 Sobic004G328500--Sobic004G177900 Sobic004G328500--Sobic004G052600 Sobic001G143700 Sobic001G143700 Sobic004G328500--Sobic001G143700 Sobic008G138400 Sobic008G138400 Sobic004G328500--Sobic008G138400 Sobic002G097300 Sobic002G097300 Sobic004G328500--Sobic002G097300 Sobic005G148000 Sobic005G148000 Sobic004G328500--Sobic005G148000 Sobic002G006200 Sobic002G006200 Sobic004G328500--Sobic002G006200 Sobic005G189100 Sobic005G189100 Sobic004G328500--Sobic005G189100 Sobic003G407700--Sobic010G073900 Sobic002G199800 Sobic002G199800 Sobic003G407700--Sobic002G199800 Sobic004G349600 Sobic004G349600 Sobic003G407700--Sobic004G349600 Sobic009G238650 Sobic009G238650 Sobic003G407700--Sobic009G238650 Sobic006G239500 Sobic006G239500 Sobic003G407700--Sobic006G239500 Sobic003G407700--Sobic009G121200 Sobic009G098700 Sobic009G098700 Sobic003G407700--Sobic009G098700 Sobic005G120400 Sobic005G120400 Sobic003G407700--Sobic005G120400 Sobic003G407700--Sobic001G165901 Sobic010G128350 Sobic010G128350 Sobic001G165901--Sobic010G128350 Sobic010G010201 Sobic010G010201 Sobic001G165901--Sobic010G010201 Sobic001G165901--Sobic009G121200 Sobic001G165901--Sobic005G120400 Sobic001G432200 Sobic001G432200 Sobic001G165901--Sobic001G432200 Sobic001G165901--Sobic004G349600 Sobic002G088600 Sobic002G088600 Sobic001G165901--Sobic002G088600 Sobic001G165901--Sobic005G092100 Sobic003G151400 Sobic003G151400 Sobic001G165901--Sobic003G151400 Sobic005G000900 Sobic005G000900 Sobic004G052600--Sobic005G000900 Sobic002G182701 Sobic002G182701 Sobic004G052600--Sobic002G182701 Sobic006G017700 Sobic006G017700 Sobic004G052600--Sobic006G017700 Sobic004G100300 Sobic004G100300 Sobic004G052600--Sobic004G100300 Sobic006G017900 Sobic006G017900 Sobic004G052600--Sobic006G017900 Sobic001G211700 Sobic001G211700 Sobic004G052600--Sobic001G211700 Sobic002G156400 Sobic002G156400 Sobic004G052600--Sobic002G156400 Sobic009G182100 Sobic009G182100 Sobic004G052600--Sobic009G182100 Sobic002G384900 Sobic002G384900 Sobic004G052600--Sobic002G384900 Sobic010G073900--Sobic003G407700 Sobic010G073900--Sobic002G199800 Sobic010G073900--Sobic009G238650 Sobic010G073900--Sobic006G239500 Sobic010G073900--Sobic004G349600 Sobic001G322400 Sobic001G322400 Sobic010G073900--Sobic001G322400 Sobic010G073900--Sobic010G128350 Sobic010G073900--Sobic009G098700 Sobic010G073900--Sobic009G121200 Sobic002G204500 Sobic002G204500 Sobic007G081100--Sobic002G204500 Sobic007G081100--Sobic007G082100 Sobic007G081100--Sobic003G191200 Sobic003G070400 Sobic003G070400 Sobic007G081100--Sobic003G070400 Sobic007G081100--Sobic007G031200 Sobic007G081100--Sobic004G100300 Sobic009G060100 Sobic009G060100 Sobic007G081100--Sobic009G060100 Sobic007G081100--Sobic002G182701 Sobic007G081100--Sobic001G211700 Sobic006G204500 Sobic006G204500 Sobic002G364700--Sobic006G204500 Sobic005G176700 Sobic005G176700 Sobic002G364700--Sobic005G176700 Sobic001G370400 Sobic001G370400 Sobic002G364700--Sobic001G370400 Sobic006G115700 Sobic006G115700 Sobic002G364700--Sobic006G115700 Sobic008G020800 Sobic008G020800 Sobic002G364700--Sobic008G020800 Sobic002G307400 Sobic002G307400 Sobic002G364700--Sobic002G307400 Sobic002G364700--Sobic004G100300 Sobic002G364700--Sobic003G070400 Sobic006G070032 Sobic006G070032 Sobic002G364700--Sobic006G070032
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.