Gene annotation
Transcriptome id Sobic.002G204500.1
Synonym Sb02g024910, PLDALPHA2
Functional annotation Phospholipase D alpha 2 PLD Alpha 2 (At) (PubMedID : 27208977)
phospholipase D, putative, expressed
UniProt C5XCW2
Pfam PF13091 PF00168 PF00614 PF12357
Panther DB PTHR18896 PTHR18896:SF66
NCBI CDD -
KEGG Orthology K01115; phospholipase D1/2
Gene Ontology GO:0005515; protein binding GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT1G52570 : phospholipase D alpha 2
RAP-DB (Rice) LOC_Os09g25390.1 : phospholipase D, putative, expressed
MaizeGDB (Corn) Zm00025a051292 , Zm00025a043052 , Zm00025a013932 , Zm00025a052107 , Zm00025a002737
Brachypodium KQK21427 , KQK07277 , KQK07276 , KQJ90277 , KQK21428 , KQK23957
Barley HORVU1Hr1G025370.4 , HORVU1Hr1G025370.1 , HORVU1Hr1G025370.2 , HORVU1Hr1G025370.3 , HORVU0Hr1G009480.1 , HORVU0Hr1G009480.3 , HORVU0Hr1G009480.2 , HORVU0Hr1G009480.5 , HORVU0Hr1G009480.4 , HORVU0Hr1G009480.7 , HORVU0Hr1G009480.6 , HORVU0Hr1G009480.9 , HORVU0Hr1G009480.8 , HORVU1Hr1G082940.1 , HORVU1Hr1G082940.2 , HORVU1Hr1G082940.3 , HORVU1Hr1G082950.13 , HORVU1Hr1G082950.12 , HORVU1Hr1G082950.10 , HORVU1Hr1G082950.11 , HORVU7Hr1G082870.2 , HORVU7Hr1G082870.3 , HORVU7Hr1G082870.1 , HORVU7Hr1G082870.4 , HORVU5Hr1G064520.6 , HORVU5Hr1G064520.7 , HORVU5Hr1G064520.4 , HORVU5Hr1G064520.5 , HORVU5Hr1G064520.2 , HORVU5Hr1G064520.3 , HORVU5Hr1G064520.1 , HORVU5Hr1G064520.8 , HORVU1Hr1G082950.9 , HORVU1Hr1G082950.8 , HORVU1Hr1G082950.3 , HORVU1Hr1G082950.2 , HORVU1Hr1G082950.1 , HORVU1Hr1G082950.7 , HORVU1Hr1G082950.6 , HORVU1Hr1G082950.5 , HORVU1Hr1G082950.4 , HORVU1Hr1G082890.6 , HORVU1Hr1G082890.4 , HORVU1Hr1G082890.5 , HORVU1Hr1G082890.2 , HORVU1Hr1G082890.3
Wheat TraesCS1A02G373100 , TraesCS1B02G393300 , TraesCS1B02G393300 , TraesCS1B02G393300 , TraesCS1B02G393300 , TraesCS5D02G231100 , TraesCS4B02G377600 , TraesCS5A02G223500 , TraesCS1B02G135200 , TraesCS1B02G135200 , TraesCSU02G145400 , TraesCSU02G145400 , TraesCS1D02G116700 , TraesCS1D02G379900 , TraesCS5B02G222500 , TraesCS1A02G115300 , TraesCS1A02G373100 , TraesCS1A02G373100 , TraesCS1A02G373100 , TraesCS1D02G379900 , TraesCS1D02G379900
Populus -


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cDNA sequences
Sobic.002G204500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G081100 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
2 Sobic.003G070400 expressed protein -
3 Sobic.007G031200 - -
4 Sobic.004G168200 ATPase, AAA family protein, expressed -
5 Sobic.007G204200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
6 Sobic.004G100300 plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.007G082100 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
8 Sobic.003G191200 expressed protein -
9 Sobic.005G049850 - -
10 Sobic.002G182701 - -
11 Sobic.010G121700 plastocyanin-like domain containing protein, putative, expressed -
12 Sobic.005G000900 OsFBX103 - F-box domain containing protein, expressed -
13 Sobic.007G070900 OsFBL43 - F-box domain and LRR containing protein, expressed -
14 Sobic.001G211700 MBTB33 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
15 Sobic.009G234900 WRKY43, expressed -
16 Sobic.007G197000 "Candidate orthologue to the wheat Pm40 gene, probable glucan endo-1,3-betaglucosidase A6"(PubMedID : 27755575)@glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
17 Sobic.008G074100 - -
18 Sobic.005G037700 OsFBX378 - F-box domain containing protein, expressed -
19 Sobic.002G384900 expressed protein -
20 Sobic.002G156400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@MDR-like ABC transporter, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1


Gene co-expression network
sample Sobic002G204500 Sobic002G204500 Sobic007G081100 Sobic007G081100 Sobic002G204500--Sobic007G081100 Sobic003G070400 Sobic003G070400 Sobic002G204500--Sobic003G070400 Sobic007G031200 Sobic007G031200 Sobic002G204500--Sobic007G031200 Sobic004G168200 Sobic004G168200 Sobic002G204500--Sobic004G168200 Sobic007G204200 Sobic007G204200 Sobic002G204500--Sobic007G204200 Sobic004G100300 Sobic004G100300 Sobic002G204500--Sobic004G100300 Sobic007G082100 Sobic007G082100 Sobic002G204500--Sobic007G082100 Sobic003G191200 Sobic003G191200 Sobic002G204500--Sobic003G191200 Sobic005G049850 Sobic005G049850 Sobic002G204500--Sobic005G049850 Sobic007G081100--Sobic002G204500 Sobic007G081100--Sobic007G082100 Sobic007G081100--Sobic003G191200 Sobic007G081100--Sobic003G070400 Sobic007G081100--Sobic007G031200 Sobic007G081100--Sobic004G100300 Sobic009G060100 Sobic009G060100 Sobic007G081100--Sobic009G060100 Sobic002G182701 Sobic002G182701 Sobic007G081100--Sobic002G182701 Sobic001G211700 Sobic001G211700 Sobic007G081100--Sobic001G211700 Sobic007G197000 Sobic007G197000 Sobic003G070400--Sobic007G197000 Sobic003G070400--Sobic007G204200 Sobic010G121700 Sobic010G121700 Sobic003G070400--Sobic010G121700 Sobic009G068400 Sobic009G068400 Sobic003G070400--Sobic009G068400 Sobic009G234900 Sobic009G234900 Sobic003G070400--Sobic009G234900 Sobic008G024200 Sobic008G024200 Sobic003G070400--Sobic008G024200 Sobic003G004000 Sobic003G004000 Sobic003G070400--Sobic003G004000 Sobic005G037700 Sobic005G037700 Sobic003G070400--Sobic005G037700 Sobic009G047100 Sobic009G047100 Sobic003G070400--Sobic009G047100 Sobic007G031200--Sobic003G191200 Sobic007G031200--Sobic004G100300 Sobic007G031200--Sobic002G182701 Sobic005G000900 Sobic005G000900 Sobic007G031200--Sobic005G000900 Sobic007G031200--Sobic007G082100 Sobic009G182100 Sobic009G182100 Sobic007G031200--Sobic009G182100 Sobic006G017900 Sobic006G017900 Sobic007G031200--Sobic006G017900 Sobic007G031200--Sobic001G211700 Sobic006G017700 Sobic006G017700 Sobic007G031200--Sobic006G017700 Sobic004G168200--Sobic001G211700 Sobic004G168200--Sobic006G017700 Sobic004G168200--Sobic006G017900 Sobic004G168200--Sobic002G182701 Sobic002G384900 Sobic002G384900 Sobic004G168200--Sobic002G384900 Sobic004G168200--Sobic005G049850 Sobic004G168200--Sobic005G000900 Sobic004G168200--Sobic007G082100 Sobic004G168200--Sobic007G031200 Sobic007G204200--Sobic005G037700 Sobic004G192600 Sobic004G192600 Sobic007G204200--Sobic004G192600 Sobic008G074100 Sobic008G074100 Sobic007G204200--Sobic008G074100 Sobic001G089400 Sobic001G089400 Sobic007G204200--Sobic001G089400 Sobic007G204200--Sobic003G004000 Sobic007G204200--Sobic007G197000 Sobic003G420500 Sobic003G420500 Sobic007G204200--Sobic003G420500 Sobic007G204200--Sobic010G121700 Sobic007G204200--Sobic003G070400 Sobic004G100300--Sobic002G384900 Sobic004G100300--Sobic002G182701 Sobic004G100300--Sobic006G017900 Sobic004G100300--Sobic005G000900 Sobic004G100300--Sobic006G017700 Sobic004G100300--Sobic007G031200 Sobic004G100300--Sobic001G211700 Sobic005G221675 Sobic005G221675 Sobic004G100300--Sobic005G221675 Sobic002G156400 Sobic002G156400 Sobic004G100300--Sobic002G156400 Sobic007G082100--Sobic003G191200 Sobic004G046700 Sobic004G046700 Sobic007G082100--Sobic004G046700 Sobic007G082100--Sobic001G211700 Sobic007G082100--Sobic006G017900 Sobic010G123800 Sobic010G123800 Sobic007G082100--Sobic010G123800 Sobic007G082100--Sobic002G182701 Sobic007G082100--Sobic009G060100 Sobic007G082100--Sobic007G031200 Sobic007G081800 Sobic007G081800 Sobic007G082100--Sobic007G081800 Sobic003G191200--Sobic007G082100 Sobic003G191200--Sobic007G031200 Sobic003G191200--Sobic004G046700 Sobic003G191200--Sobic010G123800 Sobic003G191200--Sobic007G081800 Sobic005G058300 Sobic005G058300 Sobic003G191200--Sobic005G058300 Sobic003G191200--Sobic006G017900 Sobic003G191200--Sobic004G100300 Sobic003G191200--Sobic001G211700 Sobic008G138400 Sobic008G138400 Sobic005G049850--Sobic008G138400 Sobic002G097300 Sobic002G097300 Sobic005G049850--Sobic002G097300 Sobic005G140900 Sobic005G140900 Sobic005G049850--Sobic005G140900 Sobic005G049850--Sobic002G156400 Sobic002G006200 Sobic002G006200 Sobic005G049850--Sobic002G006200 Sobic005G189100 Sobic005G189100 Sobic005G049850--Sobic005G189100 Sobic001G143700 Sobic001G143700 Sobic005G049850--Sobic001G143700 Sobic005G148000 Sobic005G148000 Sobic005G049850--Sobic005G148000 Sobic001G089300 Sobic001G089300 Sobic005G049850--Sobic001G089300
Octagon: transcription factors


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