Gene annotation
Transcriptome id Sobic.007G204200.1
Synonym DUO1, Sb07g027160
Functional annotation MYB family transcription factor, putative, expressed
UniProt C5YIL5
Pfam PF13921
Panther DB PTHR10641 PTHR10641:SF668
NCBI CDD KOG0048; Transcription factor, Myb superfamily
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G60460 : myb-like HTH transcriptional regulator family protein
RAP-DB (Rice) LOC_Os04g46384.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a005149 , Zm00025a046903 , Zm00025a010319 , Zm00025a042709 , Zm00025a056879
Brachypodium PNT61604 , KQK05002 , PNT68425 , KQK01592
Barley HORVU0Hr1G006810.2 , HORVU0Hr1G006810.1 , HORVU6Hr1G073500.5 , HORVU6Hr1G073500.4 , HORVU6Hr1G073500.3 , HORVU6Hr1G073500.1 , HORVU7Hr1G051740.1
Wheat TraesCS6D02G274900 , TraesCS7A02G251700 , TraesCS3A02G257800 , TraesCS2B02G434400 , TraesCS6A02G294000 , TraesCS2A02G415400 , TraesCS3D02G257800 , TraesCS2D02G412500 , TraesCS7B02G139400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G037700 OsFBX378 - F-box domain containing protein, expressed -
2 Sobic.004G192600 LTPL85 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
3 Sobic.008G074100 - -
4 Sobic.001G089400 ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
5 Sobic.003G004000 - -
6 Sobic.007G197000 "Candidate orthologue to the wheat Pm40 gene, probable glucan endo-1,3-betaglucosidase A6"(PubMedID : 27755575)@glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
7 Sobic.003G420500 Ca ATPase 3(PubMedID : 22196357)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
8 Sobic.010G121700 plastocyanin-like domain containing protein, putative, expressed -
9 Sobic.003G070400 expressed protein -
10 Sobic.009G234900 WRKY43, expressed -
11 Sobic.001G167300 - -
12 Sobic.008G024200 L11 domain containing ribosomal protein, putative, expressed K02867: RP-L11, MRPL11, large subunit ribosomal protein L11
13 Sobic.005G145400 RNA recognition motif containing protein, putative, expressed -
14 Sobic.008G043200 - -
15 Sobic.001G089300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
16 Sobic.005G189100 transcription factor Dp, putative, expressed -
17 Sobic.009G047100 GEX1, putative, expressed -
18 Sobic.001G525600 fringe-related protein, putative, expressed -
19 Sobic.010G016200 expressed protein -
20 Sobic.009G068400 SSRP1-like FACT complex subunit, putative, expressed K09272: structure-specific recognition protein 1


Gene co-expression network
sample Sobic007G204200 Sobic007G204200 Sobic005G037700 Sobic005G037700 Sobic007G204200--Sobic005G037700 Sobic004G192600 Sobic004G192600 Sobic007G204200--Sobic004G192600 Sobic008G074100 Sobic008G074100 Sobic007G204200--Sobic008G074100 Sobic001G089400 Sobic001G089400 Sobic007G204200--Sobic001G089400 Sobic003G004000 Sobic003G004000 Sobic007G204200--Sobic003G004000 Sobic007G197000 Sobic007G197000 Sobic007G204200--Sobic007G197000 Sobic003G420500 Sobic003G420500 Sobic007G204200--Sobic003G420500 Sobic010G121700 Sobic010G121700 Sobic007G204200--Sobic010G121700 Sobic003G070400 Sobic003G070400 Sobic007G204200--Sobic003G070400 Sobic005G037700--Sobic003G420500 Sobic005G037700--Sobic001G089400 Sobic005G037700--Sobic004G192600 Sobic005G145400 Sobic005G145400 Sobic005G037700--Sobic005G145400 Sobic005G037700--Sobic007G204200 Sobic005G037700--Sobic007G197000 Sobic005G037700--Sobic003G004000 Sobic008G043200 Sobic008G043200 Sobic005G037700--Sobic008G043200 Sobic001G525600 Sobic001G525600 Sobic005G037700--Sobic001G525600 Sobic004G192600--Sobic001G089400 Sobic004G192600--Sobic003G004000 Sobic001G167300 Sobic001G167300 Sobic004G192600--Sobic001G167300 Sobic004G192600--Sobic008G043200 Sobic004G192600--Sobic005G037700 Sobic010G207800 Sobic010G207800 Sobic004G192600--Sobic010G207800 Sobic004G192600--Sobic003G420500 Sobic010G016200 Sobic010G016200 Sobic004G192600--Sobic010G016200 Sobic007G215200 Sobic007G215200 Sobic004G192600--Sobic007G215200 Sobic008G074100--Sobic007G204200 Sobic008G074100--Sobic005G037700 Sobic008G074100--Sobic004G192600 Sobic008G074100--Sobic003G004000 Sobic008G074100--Sobic010G121700 Sobic008G074100--Sobic001G089400 Sobic008G074100--Sobic007G197000 Sobic009G234900 Sobic009G234900 Sobic008G074100--Sobic009G234900 Sobic008G074100--Sobic003G420500 Sobic001G089400--Sobic004G192600 Sobic001G089400--Sobic003G004000 Sobic001G089400--Sobic008G043200 Sobic001G089400--Sobic001G167300 Sobic001G089400--Sobic005G037700 Sobic001G089400--Sobic010G207800 Sobic001G089400--Sobic010G016200 Sobic001G089400--Sobic003G420500 Sobic001G089400--Sobic007G215200 Sobic003G004000--Sobic001G167300 Sobic003G004000--Sobic004G192600 Sobic003G004000--Sobic001G089400 Sobic003G004000--Sobic008G043200 Sobic008G024200 Sobic008G024200 Sobic003G004000--Sobic008G024200 Sobic003G004000--Sobic010G207800 Sobic003G004000--Sobic010G121700 Sobic005G006100 Sobic005G006100 Sobic003G004000--Sobic005G006100 Sobic003G004000--Sobic009G234900 Sobic007G197000--Sobic005G037700 Sobic007G197000--Sobic003G420500 Sobic007G197000--Sobic004G192600 Sobic007G197000--Sobic001G089400 Sobic007G197000--Sobic003G004000 Sobic007G197000--Sobic008G043200 Sobic007G197000--Sobic007G204200 Sobic007G197000--Sobic005G145400 Sobic007G197000--Sobic001G525600 Sobic003G420500--Sobic005G145400 Sobic003G420500--Sobic005G037700 Sobic003G420500--Sobic008G043200 Sobic003G420500--Sobic001G525600 Sobic003G420500--Sobic001G089400 Sobic003G420500--Sobic004G192600 Sobic004G099200 Sobic004G099200 Sobic003G420500--Sobic004G099200 Sobic003G420500--Sobic010G016200 Sobic003G420500--Sobic007G197000 Sobic010G121700--Sobic009G234900 Sobic005G189100 Sobic005G189100 Sobic010G121700--Sobic005G189100 Sobic010G121700--Sobic008G024200 Sobic001G089300 Sobic001G089300 Sobic010G121700--Sobic001G089300 Sobic009G047100 Sobic009G047100 Sobic010G121700--Sobic009G047100 Sobic002G006200 Sobic002G006200 Sobic010G121700--Sobic002G006200 Sobic002G156400 Sobic002G156400 Sobic010G121700--Sobic002G156400 Sobic008G138400 Sobic008G138400 Sobic010G121700--Sobic008G138400 Sobic002G097300 Sobic002G097300 Sobic010G121700--Sobic002G097300 Sobic003G070400--Sobic007G197000 Sobic003G070400--Sobic007G204200 Sobic003G070400--Sobic010G121700 Sobic009G068400 Sobic009G068400 Sobic003G070400--Sobic009G068400 Sobic003G070400--Sobic009G234900 Sobic003G070400--Sobic008G024200 Sobic003G070400--Sobic003G004000 Sobic003G070400--Sobic005G037700 Sobic003G070400--Sobic009G047100
Octagon: transcription factors


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