Gene annotation
Transcriptome id Sobic.003G004000.1
Synonym
Functional annotation -
UniProt A0A1B6Q0K5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G167300 - -
2 Sobic.004G192600 LTPL85 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
3 Sobic.001G089400 ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
4 Sobic.008G043200 - -
5 Sobic.008G024200 L11 domain containing ribosomal protein, putative, expressed K02867: RP-L11, MRPL11, large subunit ribosomal protein L11
6 Sobic.010G207800 E1-E2 ATPase domain containing protein, expressed K01535: PMA1, H+-transporting ATPase
7 Sobic.010G121700 plastocyanin-like domain containing protein, putative, expressed -
8 Sobic.005G006100 hypothetical protein -
9 Sobic.009G234900 WRKY43, expressed -
10 Sobic.007G215200 "Ca ATPase, IIB type"(PubMedID : 22196357)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
11 Sobic.005G037700 OsFBX378 - F-box domain containing protein, expressed -
12 Sobic.005G189100 transcription factor Dp, putative, expressed -
13 Sobic.007G122600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
14 Sobic.001G089300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
15 Sobic.010G016200 expressed protein -
16 Sobic.004G290500 actin-depolymerizing factor, putative, expressed K05765: cofilin
17 Sobic.002G006200 - -
18 Sobic.003G420500 Ca ATPase 3(PubMedID : 22196357)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
19 Sobic.009G047100 GEX1, putative, expressed -
20 Sobic.001G143700 cupin domain containing protein, expressed -


Gene co-expression network
sample Sobic003G004000 Sobic003G004000 Sobic001G167300 Sobic001G167300 Sobic003G004000--Sobic001G167300 Sobic004G192600 Sobic004G192600 Sobic003G004000--Sobic004G192600 Sobic001G089400 Sobic001G089400 Sobic003G004000--Sobic001G089400 Sobic008G043200 Sobic008G043200 Sobic003G004000--Sobic008G043200 Sobic008G024200 Sobic008G024200 Sobic003G004000--Sobic008G024200 Sobic010G207800 Sobic010G207800 Sobic003G004000--Sobic010G207800 Sobic010G121700 Sobic010G121700 Sobic003G004000--Sobic010G121700 Sobic005G006100 Sobic005G006100 Sobic003G004000--Sobic005G006100 Sobic009G234900 Sobic009G234900 Sobic003G004000--Sobic009G234900 Sobic001G167300--Sobic003G004000 Sobic001G167300--Sobic005G006100 Sobic001G167300--Sobic010G207800 Sobic007G122600 Sobic007G122600 Sobic001G167300--Sobic007G122600 Sobic001G167300--Sobic008G024200 Sobic001G167300--Sobic004G192600 Sobic001G167300--Sobic001G089400 Sobic001G167300--Sobic009G234900 Sobic005G189100 Sobic005G189100 Sobic001G167300--Sobic005G189100 Sobic004G192600--Sobic001G089400 Sobic004G192600--Sobic003G004000 Sobic004G192600--Sobic001G167300 Sobic004G192600--Sobic008G043200 Sobic005G037700 Sobic005G037700 Sobic004G192600--Sobic005G037700 Sobic004G192600--Sobic010G207800 Sobic003G420500 Sobic003G420500 Sobic004G192600--Sobic003G420500 Sobic010G016200 Sobic010G016200 Sobic004G192600--Sobic010G016200 Sobic007G215200 Sobic007G215200 Sobic004G192600--Sobic007G215200 Sobic001G089400--Sobic004G192600 Sobic001G089400--Sobic003G004000 Sobic001G089400--Sobic008G043200 Sobic001G089400--Sobic001G167300 Sobic001G089400--Sobic005G037700 Sobic001G089400--Sobic010G207800 Sobic001G089400--Sobic010G016200 Sobic001G089400--Sobic003G420500 Sobic001G089400--Sobic007G215200 Sobic008G043200--Sobic010G016200 Sobic005G145400 Sobic005G145400 Sobic008G043200--Sobic005G145400 Sobic009G175400 Sobic009G175400 Sobic008G043200--Sobic009G175400 Sobic008G043200--Sobic001G089400 Sobic010G040400 Sobic010G040400 Sobic008G043200--Sobic010G040400 Sobic008G043200--Sobic007G215200 Sobic001G092500 Sobic001G092500 Sobic008G043200--Sobic001G092500 Sobic008G043200--Sobic010G207800 Sobic001G332000 Sobic001G332000 Sobic008G043200--Sobic001G332000 Sobic009G047100 Sobic009G047100 Sobic008G024200--Sobic009G047100 Sobic008G024200--Sobic009G234900 Sobic008G024200--Sobic010G121700 Sobic008G024200--Sobic005G189100 Sobic002G006200 Sobic002G006200 Sobic008G024200--Sobic002G006200 Sobic001G089300 Sobic001G089300 Sobic008G024200--Sobic001G089300 Sobic001G143700 Sobic001G143700 Sobic008G024200--Sobic001G143700 Sobic008G024200--Sobic001G167300 Sobic008G138400 Sobic008G138400 Sobic008G024200--Sobic008G138400 Sobic007G014000 Sobic007G014000 Sobic010G207800--Sobic007G014000 Sobic010G207800--Sobic007G215200 Sobic001G261416 Sobic001G261416 Sobic010G207800--Sobic001G261416 Sobic010G090200 Sobic010G090200 Sobic010G207800--Sobic010G090200 Sobic010G216100 Sobic010G216100 Sobic010G207800--Sobic010G216100 Sobic010G207800--Sobic005G006100 Sobic010G240300 Sobic010G240300 Sobic010G207800--Sobic010G240300 Sobic010G207800--Sobic001G167300 Sobic001G287400 Sobic001G287400 Sobic010G207800--Sobic001G287400 Sobic010G121700--Sobic009G234900 Sobic010G121700--Sobic005G189100 Sobic010G121700--Sobic008G024200 Sobic010G121700--Sobic001G089300 Sobic010G121700--Sobic009G047100 Sobic010G121700--Sobic002G006200 Sobic002G156400 Sobic002G156400 Sobic010G121700--Sobic002G156400 Sobic010G121700--Sobic008G138400 Sobic002G097300 Sobic002G097300 Sobic010G121700--Sobic002G097300 Sobic005G006100--Sobic007G122600 Sobic007G134501 Sobic007G134501 Sobic005G006100--Sobic007G134501 Sobic002G194201 Sobic002G194201 Sobic005G006100--Sobic002G194201 Sobic003G007650 Sobic003G007650 Sobic005G006100--Sobic003G007650 Sobic005G006100--Sobic010G240300 Sobic005G006400 Sobic005G006400 Sobic005G006100--Sobic005G006400 Sobic007G035200 Sobic007G035200 Sobic005G006100--Sobic007G035200 Sobic005G040100 Sobic005G040100 Sobic005G006100--Sobic005G040100 Sobic005G006100--Sobic010G207800 Sobic009G234900--Sobic005G189100 Sobic009G234900--Sobic010G121700 Sobic009G234900--Sobic001G089300 Sobic009G234900--Sobic008G024200 Sobic009G234900--Sobic002G006200 Sobic009G234900--Sobic009G047100 Sobic009G234900--Sobic008G138400 Sobic009G234900--Sobic002G156400 Sobic009G234900--Sobic001G143700
Octagon: transcription factors


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