Gene annotation
Transcriptome id Sobic.007G215200.1
Synonym Sb07g028160, ACA2
Functional annotation "Ca ATPase, IIB type" (PubMedID : 22196357)
calcium-transporting ATPase, plasma membrane-type, putative, expressed
UniProt C5YJ60
Pfam PF00690 PF12515 PF12710 PF00689 PF00122
Panther DB PTHR24093 PTHR24093:SF262
NCBI CDD -
KEGG Orthology K01537; P-type Ca2+ transporter type 2C
Gene Ontology GO:0005516; calmodulin binding GO:0000166nucleotide binding


Orthologs (automatic annotation)
TAIR AT4G37640 : calcium ATPase 2
RAP-DB (Rice) LOC_Os03g10640.1 : calcium-transporting ATPase, plasma membrane-type, putative, expressed
MaizeGDB (Corn) Zm00025a005017 , Zm00025a000410 , Zm00025a053689 , Zm00025a001148 , Zm00025a051359 , Zm00025a033769 , Zm00025a026087 , Zm00025a057250 , Zm00025a038228 , Zm00025a042055
Brachypodium PNT76376 , KQK23041 , KQJ95742 , KQK11453
Barley HORVU3Hr1G102890.3 , HORVU3Hr1G102890.2 , HORVU3Hr1G102890.1 , HORVU3Hr1G102890.5 , HORVU3Hr1G102890.4 , HORVU4Hr1G069990.11 , HORVU4Hr1G069990.10 , HORVU4Hr1G069990.9 , HORVU4Hr1G069990.8 , HORVU4Hr1G069990.5 , HORVU4Hr1G069990.4 , HORVU4Hr1G069990.7 , HORVU4Hr1G069990.6 , HORVU4Hr1G069990.3 , HORVU4Hr1G069990.2
Wheat TraesCS3B02G519000 , TraesCS7D02G146700 , TraesCS7B02G047600 , TraesCS7A02G145400 , TraesCS3A02G475500 , TraesCS4B02G258000 , TraesCS4B02G258000 , TraesCS4B02G258000
Populus PNT27291 , PNT27292


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cDNA sequences
Sobic.007G215200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G207800 E1-E2 ATPase domain containing protein, expressed K01535: PMA1, H+-transporting ATPase
2 Sobic.001G261416 - K01858: INO1, myo-inositol-1-phosphate synthase
3 Sobic.001G332000 pollen allergen, putative, expressed -
4 Sobic.010G090200 OsMADS63 - MADS-box family gene with MIKC , type-box, expressed -
5 Sobic.001G329200 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
6 Sobic.001G287400 VQ domain containing protein, putative, expressed -
7 Sobic.007G014000 OsFBX142 - F-box domain containing protein, expressed -
8 Sobic.001G171300 UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
9 Sobic.010G216100 leaf senescence related protein, putative, expressed -
10 Sobic.001G130500 - -
11 Sobic.008G043200 - -
12 Sobic.003G175950 - -
13 Sobic.010G240300 Os12bglu38 - beta-glucosidase/beta-mannosidase/exoglucanase homologue, expressed K05350: beta-glucosidase
14 Sobic.005G040700 amino acid permease family protein, putative, expressed -
15 Sobic.001G165700 B3 DNA binding domain containing protein, expressed -
16 Sobic.005G006100 hypothetical protein -
17 Sobic.007G145500 adenylyl cyclase-associated protein, putative, expressed K17261: CAP1_2, adenylyl cyclase-associated protein
18 Sobic.001G063300 CAMK_CAMK_like.23 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
19 Sobic.010G040400 polygalacturonase, putative, expressed -
20 Sobic.001G167300 - -


Gene co-expression network
sample Sobic007G215200 Sobic007G215200 Sobic010G207800 Sobic010G207800 Sobic007G215200--Sobic010G207800 Sobic001G261416 Sobic001G261416 Sobic007G215200--Sobic001G261416 Sobic001G332000 Sobic001G332000 Sobic007G215200--Sobic001G332000 Sobic010G090200 Sobic010G090200 Sobic007G215200--Sobic010G090200 Sobic001G329200 Sobic001G329200 Sobic007G215200--Sobic001G329200 Sobic001G287400 Sobic001G287400 Sobic007G215200--Sobic001G287400 Sobic007G014000 Sobic007G014000 Sobic007G215200--Sobic007G014000 Sobic001G171300 Sobic001G171300 Sobic007G215200--Sobic001G171300 Sobic010G216100 Sobic010G216100 Sobic007G215200--Sobic010G216100 Sobic010G207800--Sobic007G014000 Sobic010G207800--Sobic007G215200 Sobic010G207800--Sobic001G261416 Sobic010G207800--Sobic010G090200 Sobic010G207800--Sobic010G216100 Sobic005G006100 Sobic005G006100 Sobic010G207800--Sobic005G006100 Sobic010G240300 Sobic010G240300 Sobic010G207800--Sobic010G240300 Sobic001G167300 Sobic001G167300 Sobic010G207800--Sobic001G167300 Sobic010G207800--Sobic001G287400 Sobic001G261416--Sobic010G090200 Sobic001G261416--Sobic001G171300 Sobic001G261416--Sobic001G287400 Sobic001G261416--Sobic001G329200 Sobic001G261416--Sobic007G014000 Sobic001G165700 Sobic001G165700 Sobic001G261416--Sobic001G165700 Sobic001G261416--Sobic010G216100 Sobic001G261416--Sobic010G207800 Sobic010G215000 Sobic010G215000 Sobic001G261416--Sobic010G215000 Sobic001G332000--Sobic001G329200 Sobic001G130500 Sobic001G130500 Sobic001G332000--Sobic001G130500 Sobic003G175950 Sobic003G175950 Sobic001G332000--Sobic003G175950 Sobic005G040700 Sobic005G040700 Sobic001G332000--Sobic005G040700 Sobic001G332000--Sobic001G287400 Sobic001G332000--Sobic001G171300 Sobic010G051000 Sobic010G051000 Sobic001G332000--Sobic010G051000 Sobic001G269100 Sobic001G269100 Sobic001G332000--Sobic001G269100 Sobic001G332000--Sobic001G261416 Sobic010G090200--Sobic001G261416 Sobic010G090200--Sobic007G014000 Sobic010G090200--Sobic010G240300 Sobic010G090200--Sobic010G216100 Sobic010G090200--Sobic001G171300 Sobic010G090200--Sobic010G207800 Sobic010G090200--Sobic010G215000 Sobic010G090200--Sobic001G287400 Sobic005G006400 Sobic005G006400 Sobic010G090200--Sobic005G006400 Sobic001G329200--Sobic003G175950 Sobic001G329200--Sobic001G332000 Sobic001G329200--Sobic001G287400 Sobic001G329200--Sobic001G171300 Sobic001G329200--Sobic001G130500 Sobic001G329200--Sobic005G040700 Sobic001G329200--Sobic001G261416 Sobic001G329200--Sobic001G165700 Sobic001G329200--Sobic001G269100 Sobic001G287400--Sobic001G329200 Sobic001G287400--Sobic001G171300 Sobic001G287400--Sobic003G175950 Sobic001G287400--Sobic001G332000 Sobic001G287400--Sobic001G261416 Sobic001G287400--Sobic001G130500 Sobic001G287400--Sobic001G165700 Sobic001G287400--Sobic005G040700 Sobic001G287400--Sobic001G269100 Sobic007G014000--Sobic010G090200 Sobic007G014000--Sobic010G240300 Sobic007G014000--Sobic010G216100 Sobic007G014000--Sobic001G261416 Sobic007G014000--Sobic010G207800 Sobic007G014000--Sobic005G006400 Sobic008G086500 Sobic008G086500 Sobic007G014000--Sobic008G086500 Sobic007G035200 Sobic007G035200 Sobic007G014000--Sobic007G035200 Sobic007G014000--Sobic005G006100 Sobic001G171300--Sobic001G165700 Sobic001G171300--Sobic001G329200 Sobic001G171300--Sobic001G287400 Sobic001G171300--Sobic001G261416 Sobic001G171300--Sobic003G175950 Sobic001G171300--Sobic001G130500 Sobic001G171300--Sobic010G215000 Sobic007G145500 Sobic007G145500 Sobic001G171300--Sobic007G145500 Sobic001G171300--Sobic001G332000 Sobic010G216100--Sobic007G014000 Sobic010G216100--Sobic010G240300 Sobic010G216100--Sobic010G090200 Sobic010G216100--Sobic001G261416 Sobic010G216100--Sobic008G086500 Sobic010G216100--Sobic005G006400 Sobic002G194300 Sobic002G194300 Sobic010G216100--Sobic002G194300 Sobic010G216100--Sobic010G215000 Sobic010G216100--Sobic010G207800
Octagon: transcription factors


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