Gene annotation
Transcriptome id Sobic.001G063300.1
Synonym CPK2, ATCPK2, Sb01g005750
Functional annotation CAMK_CAMK_like.23 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt C5WY49
Pfam PF07714 PF13499
Panther DB PTHR24349 PTHR24349:SF151
NCBI CDD KOG0032; Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
KEGG Orthology K13412; calcium-dependent protein kinase
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G04870 : calcium dependent protein kinase 1
RAP-DB (Rice) LOC_Os03g57510.1 : CAMK_CAMK_like.23 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a016143 , Zm00025a024833 , Zm00025a033981 , Zm00025a008491 , Zm00025a012860 , Zm00025a016612 , Zm00025a032700 , Zm00025a008488 , Zm00025a056693 , Zm00025a010059
Brachypodium PNT69746 , KQK12833 , KQK00812 , KQK20829 , KQK20828 , KQJ84217
Barley HORVU6Hr1G066470.9 , HORVU6Hr1G066470.8 , HORVU6Hr1G066470.5 , HORVU6Hr1G066470.4 , HORVU6Hr1G066470.1 , HORVU6Hr1G066470.2 , HORVU6Hr1G066470.11 , HORVU6Hr1G066470.10 , HORVU6Hr1G066470.13 , HORVU6Hr1G066470.15 , HORVU6Hr1G066470.14 , HORVU6Hr1G066470.17 , HORVU6Hr1G066470.16 , HORVU6Hr1G094990.7 , HORVU2Hr1G058530.5 , HORVU2Hr1G058530.4 , HORVU2Hr1G058530.1 , HORVU2Hr1G058530.3 , HORVU2Hr1G058530.2 , HORVU6Hr1G094990.6 , HORVU6Hr1G094990.5 , HORVU6Hr1G094990.4 , HORVU6Hr1G094990.3 , HORVU6Hr1G094990.1 , HORVU6Hr1G094990.8 , HORVU5Hr1G103830.4 , HORVU5Hr1G103830.5 , HORVU5Hr1G103830.6 , HORVU5Hr1G103830.7 , HORVU5Hr1G103830.1 , HORVU5Hr1G103830.2 , HORVU5Hr1G103830.3 , HORVU5Hr1G103830.8 , HORVU5Hr1G103830.9 , HORVU6Hr1G094990.2 , HORVU5Hr1G103830.10 , HORVU5Hr1G103830.11
Wheat TraesCS5B02G428700 , TraesCS5D02G434500 , TraesCS5A02G426800 , TraesCS5A02G426800 , TraesCS2B02G269200 , TraesCS2B02G269200 , TraesCS2B02G269200 , TraesCS2D02G456400 , TraesCS5D02G434500 , TraesCS5B02G428400 , TraesCS5B02G428400 , TraesCS6B02G288600 , TraesCS6A02G261200 , TraesCS2A02G456100 , TraesCS6D02G242000 , TraesCS6D02G242000 , TraesCS5D02G434800 , TraesCS5D02G434800 , TraesCS2B02G478100 , TraesCS2D02G249900 , TraesCS2D02G249900 , TraesCS5A02G426500 , TraesCS2A02G248200 , TraesCS2A02G248200 , TraesCS2A02G248200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G261416 - K01858: INO1, myo-inositol-1-phosphate synthase
2 Sobic.010G090200 OsMADS63 - MADS-box family gene with MIKC , type-box, expressed -
3 Sobic.010G207800 E1-E2 ATPase domain containing protein, expressed K01535: PMA1, H+-transporting ATPase
4 Sobic.010G216100 leaf senescence related protein, putative, expressed -
5 Sobic.007G014000 OsFBX142 - F-box domain containing protein, expressed -
6 Sobic.010G240300 Os12bglu38 - beta-glucosidase/beta-mannosidase/exoglucanase homologue, expressed K05350: beta-glucosidase
7 Sobic.007G215200 "Ca ATPase, IIB type"(PubMedID : 22196357)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
8 Sobic.001G287400 VQ domain containing protein, putative, expressed -
9 Sobic.005G006100 hypothetical protein -
10 Sobic.001G171300 UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
11 Sobic.001G329200 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
12 Sobic.005G006400 DEFL55 - Defensin and Defensin-like DEFL family, expressed -
13 Sobic.001G165700 B3 DNA binding domain containing protein, expressed -
14 Sobic.007G145500 adenylyl cyclase-associated protein, putative, expressed K17261: CAP1_2, adenylyl cyclase-associated protein
15 Sobic.001G332000 pollen allergen, putative, expressed -
16 Sobic.010G215000 fasciclin-like arabinogalactan precursor protein, putative, expressed -
17 Sobic.007G035200 - -
18 Sobic.008G086500 - -
19 Sobic.001G212500 vacuolar protein sorting-associated protein 52, putative, expressed -
20 Sobic.003G175950 - -


Gene co-expression network
sample Sobic001G063300 Sobic001G063300 Sobic001G261416 Sobic001G261416 Sobic001G063300--Sobic001G261416 Sobic010G090200 Sobic010G090200 Sobic001G063300--Sobic010G090200 Sobic010G207800 Sobic010G207800 Sobic001G063300--Sobic010G207800 Sobic010G216100 Sobic010G216100 Sobic001G063300--Sobic010G216100 Sobic007G014000 Sobic007G014000 Sobic001G063300--Sobic007G014000 Sobic010G240300 Sobic010G240300 Sobic001G063300--Sobic010G240300 Sobic007G215200 Sobic007G215200 Sobic001G063300--Sobic007G215200 Sobic001G287400 Sobic001G287400 Sobic001G063300--Sobic001G287400 Sobic005G006100 Sobic005G006100 Sobic001G063300--Sobic005G006100 Sobic001G261416--Sobic010G090200 Sobic001G171300 Sobic001G171300 Sobic001G261416--Sobic001G171300 Sobic001G261416--Sobic001G287400 Sobic001G329200 Sobic001G329200 Sobic001G261416--Sobic001G329200 Sobic001G261416--Sobic007G014000 Sobic001G165700 Sobic001G165700 Sobic001G261416--Sobic001G165700 Sobic001G261416--Sobic010G216100 Sobic001G261416--Sobic010G207800 Sobic010G215000 Sobic010G215000 Sobic001G261416--Sobic010G215000 Sobic010G090200--Sobic001G261416 Sobic010G090200--Sobic007G014000 Sobic010G090200--Sobic010G240300 Sobic010G090200--Sobic010G216100 Sobic010G090200--Sobic001G171300 Sobic010G090200--Sobic010G207800 Sobic010G090200--Sobic010G215000 Sobic010G090200--Sobic001G287400 Sobic005G006400 Sobic005G006400 Sobic010G090200--Sobic005G006400 Sobic010G207800--Sobic007G014000 Sobic010G207800--Sobic007G215200 Sobic010G207800--Sobic001G261416 Sobic010G207800--Sobic010G090200 Sobic010G207800--Sobic010G216100 Sobic010G207800--Sobic005G006100 Sobic010G207800--Sobic010G240300 Sobic001G167300 Sobic001G167300 Sobic010G207800--Sobic001G167300 Sobic010G207800--Sobic001G287400 Sobic010G216100--Sobic007G014000 Sobic010G216100--Sobic010G240300 Sobic010G216100--Sobic010G090200 Sobic010G216100--Sobic001G261416 Sobic008G086500 Sobic008G086500 Sobic010G216100--Sobic008G086500 Sobic010G216100--Sobic005G006400 Sobic002G194300 Sobic002G194300 Sobic010G216100--Sobic002G194300 Sobic010G216100--Sobic010G215000 Sobic010G216100--Sobic010G207800 Sobic007G014000--Sobic010G090200 Sobic007G014000--Sobic010G240300 Sobic007G014000--Sobic010G216100 Sobic007G014000--Sobic001G261416 Sobic007G014000--Sobic010G207800 Sobic007G014000--Sobic005G006400 Sobic007G014000--Sobic008G086500 Sobic007G035200 Sobic007G035200 Sobic007G014000--Sobic007G035200 Sobic007G014000--Sobic005G006100 Sobic010G240300--Sobic005G006400 Sobic010G240300--Sobic007G014000 Sobic010G240300--Sobic008G086500 Sobic010G240300--Sobic010G216100 Sobic010G240300--Sobic007G035200 Sobic010G240300--Sobic010G090200 Sobic003G007650 Sobic003G007650 Sobic010G240300--Sobic003G007650 Sobic010G240300--Sobic005G006100 Sobic002G194201 Sobic002G194201 Sobic010G240300--Sobic002G194201 Sobic007G215200--Sobic010G207800 Sobic007G215200--Sobic001G261416 Sobic001G332000 Sobic001G332000 Sobic007G215200--Sobic001G332000 Sobic007G215200--Sobic010G090200 Sobic007G215200--Sobic001G329200 Sobic007G215200--Sobic001G287400 Sobic007G215200--Sobic007G014000 Sobic007G215200--Sobic001G171300 Sobic007G215200--Sobic010G216100 Sobic001G287400--Sobic001G329200 Sobic001G287400--Sobic001G171300 Sobic003G175950 Sobic003G175950 Sobic001G287400--Sobic003G175950 Sobic001G287400--Sobic001G332000 Sobic001G287400--Sobic001G261416 Sobic001G130500 Sobic001G130500 Sobic001G287400--Sobic001G130500 Sobic001G287400--Sobic001G165700 Sobic005G040700 Sobic005G040700 Sobic001G287400--Sobic005G040700 Sobic001G269100 Sobic001G269100 Sobic001G287400--Sobic001G269100 Sobic007G122600 Sobic007G122600 Sobic005G006100--Sobic007G122600 Sobic007G134501 Sobic007G134501 Sobic005G006100--Sobic007G134501 Sobic005G006100--Sobic002G194201 Sobic005G006100--Sobic003G007650 Sobic005G006100--Sobic010G240300 Sobic005G006100--Sobic005G006400 Sobic005G006100--Sobic007G035200 Sobic005G040100 Sobic005G040100 Sobic005G006100--Sobic005G040100 Sobic005G006100--Sobic010G207800
Octagon: transcription factors


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