Gene annotation
Transcriptome id Sobic.010G090200.2
Synonym AGL66, Sb10g007810
Functional annotation OsMADS63 - MADS-box family gene with MIKC* type-box, expressed
UniProt A0A194YI31
Pfam PF00319
Panther DB PTHR11945 PTHR11945:SF200
NCBI CDD KOG0014; MADS box transcription factor
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding


Orthologs (automatic annotation)
TAIR AT1G77980 : AGAMOUS-like 66
RAP-DB (Rice) LOC_Os06g11970.1 : OsMADS63 - MADS-box family gene with MIKC* type-box, expressed
MaizeGDB (Corn) Zm00025a054199 , Zm00025a042574 , Zm00025a049493
Brachypodium PNT65319 , KQJ93543 , KQJ98794 , KQJ99121 , KQJ92793 , KQJ91889 , PNT65320 , PNT65321
Barley HORVU4Hr1G003610.6 , HORVU4Hr1G003610.7 , HORVU4Hr1G003610.5 , HORVU4Hr1G003610.2 , HORVU4Hr1G003610.1 , HORVU4Hr1G003610.8 , HORVU4Hr1G003610.9 , HORVU4Hr1G003610.10
Wheat TraesCS4A02G290700 , TraesCS5D02G294500 , TraesCS5A02G286800 , TraesCS5B02G286100 , TraesCS5B02G286100 , TraesCS4D02G021100 , TraesCS4B02G023300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G261416 - K01858: INO1, myo-inositol-1-phosphate synthase
2 Sobic.007G014000 OsFBX142 - F-box domain containing protein, expressed -
3 Sobic.010G240300 Os12bglu38 - beta-glucosidase/beta-mannosidase/exoglucanase homologue, expressed K05350: beta-glucosidase
4 Sobic.010G216100 leaf senescence related protein, putative, expressed -
5 Sobic.001G171300 UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
6 Sobic.010G207800 E1-E2 ATPase domain containing protein, expressed K01535: PMA1, H+-transporting ATPase
7 Sobic.010G215000 fasciclin-like arabinogalactan precursor protein, putative, expressed -
8 Sobic.001G287400 VQ domain containing protein, putative, expressed -
9 Sobic.005G006400 DEFL55 - Defensin and Defensin-like DEFL family, expressed -
10 Sobic.001G165700 B3 DNA binding domain containing protein, expressed -
11 Sobic.001G329200 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
12 Sobic.003G351100 - -
13 Sobic.002G194300 expressed protein -
14 Sobic.007G035200 - -
15 Sobic.007G145500 adenylyl cyclase-associated protein, putative, expressed K17261: CAP1_2, adenylyl cyclase-associated protein
16 Sobic.008G086500 - -
17 Sobic.005G006100 hypothetical protein -
18 Sobic.007G215200 "Ca ATPase, IIB type"(PubMedID : 22196357)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
19 Sobic.006G005300 erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15919: glyoxylate/hydroxypyruvate reductase
20 Sobic.003G175950 - -


Gene co-expression network
sample Sobic010G090200 Sobic010G090200 Sobic001G261416 Sobic001G261416 Sobic010G090200--Sobic001G261416 Sobic007G014000 Sobic007G014000 Sobic010G090200--Sobic007G014000 Sobic010G240300 Sobic010G240300 Sobic010G090200--Sobic010G240300 Sobic010G216100 Sobic010G216100 Sobic010G090200--Sobic010G216100 Sobic001G171300 Sobic001G171300 Sobic010G090200--Sobic001G171300 Sobic010G207800 Sobic010G207800 Sobic010G090200--Sobic010G207800 Sobic010G215000 Sobic010G215000 Sobic010G090200--Sobic010G215000 Sobic001G287400 Sobic001G287400 Sobic010G090200--Sobic001G287400 Sobic005G006400 Sobic005G006400 Sobic010G090200--Sobic005G006400 Sobic001G261416--Sobic010G090200 Sobic001G261416--Sobic001G171300 Sobic001G261416--Sobic001G287400 Sobic001G329200 Sobic001G329200 Sobic001G261416--Sobic001G329200 Sobic001G261416--Sobic007G014000 Sobic001G165700 Sobic001G165700 Sobic001G261416--Sobic001G165700 Sobic001G261416--Sobic010G216100 Sobic001G261416--Sobic010G207800 Sobic001G261416--Sobic010G215000 Sobic007G014000--Sobic010G090200 Sobic007G014000--Sobic010G240300 Sobic007G014000--Sobic010G216100 Sobic007G014000--Sobic001G261416 Sobic007G014000--Sobic010G207800 Sobic007G014000--Sobic005G006400 Sobic008G086500 Sobic008G086500 Sobic007G014000--Sobic008G086500 Sobic007G035200 Sobic007G035200 Sobic007G014000--Sobic007G035200 Sobic005G006100 Sobic005G006100 Sobic007G014000--Sobic005G006100 Sobic010G240300--Sobic005G006400 Sobic010G240300--Sobic007G014000 Sobic010G240300--Sobic008G086500 Sobic010G240300--Sobic010G216100 Sobic010G240300--Sobic007G035200 Sobic010G240300--Sobic010G090200 Sobic003G007650 Sobic003G007650 Sobic010G240300--Sobic003G007650 Sobic010G240300--Sobic005G006100 Sobic002G194201 Sobic002G194201 Sobic010G240300--Sobic002G194201 Sobic010G216100--Sobic007G014000 Sobic010G216100--Sobic010G240300 Sobic010G216100--Sobic010G090200 Sobic010G216100--Sobic001G261416 Sobic010G216100--Sobic008G086500 Sobic010G216100--Sobic005G006400 Sobic002G194300 Sobic002G194300 Sobic010G216100--Sobic002G194300 Sobic010G216100--Sobic010G215000 Sobic010G216100--Sobic010G207800 Sobic001G171300--Sobic001G165700 Sobic001G171300--Sobic001G329200 Sobic001G171300--Sobic001G287400 Sobic001G171300--Sobic001G261416 Sobic003G175950 Sobic003G175950 Sobic001G171300--Sobic003G175950 Sobic001G130500 Sobic001G130500 Sobic001G171300--Sobic001G130500 Sobic001G171300--Sobic010G215000 Sobic007G145500 Sobic007G145500 Sobic001G171300--Sobic007G145500 Sobic001G332000 Sobic001G332000 Sobic001G171300--Sobic001G332000 Sobic010G207800--Sobic007G014000 Sobic007G215200 Sobic007G215200 Sobic010G207800--Sobic007G215200 Sobic010G207800--Sobic001G261416 Sobic010G207800--Sobic010G090200 Sobic010G207800--Sobic010G216100 Sobic010G207800--Sobic005G006100 Sobic010G207800--Sobic010G240300 Sobic001G167300 Sobic001G167300 Sobic010G207800--Sobic001G167300 Sobic010G207800--Sobic001G287400 Sobic010G215000--Sobic002G194300 Sobic010G215000--Sobic001G165700 Sobic007G160501 Sobic007G160501 Sobic010G215000--Sobic007G160501 Sobic003G351100 Sobic003G351100 Sobic010G215000--Sobic003G351100 Sobic005G220400 Sobic005G220400 Sobic010G215000--Sobic005G220400 Sobic010G215000--Sobic001G171300 Sobic003G445300 Sobic003G445300 Sobic010G215000--Sobic003G445300 Sobic007G095333 Sobic007G095333 Sobic010G215000--Sobic007G095333 Sobic010G215000--Sobic001G261416 Sobic001G287400--Sobic001G329200 Sobic001G287400--Sobic001G171300 Sobic001G287400--Sobic003G175950 Sobic001G287400--Sobic001G332000 Sobic001G287400--Sobic001G261416 Sobic001G287400--Sobic001G130500 Sobic001G287400--Sobic001G165700 Sobic005G040700 Sobic005G040700 Sobic001G287400--Sobic005G040700 Sobic001G269100 Sobic001G269100 Sobic001G287400--Sobic001G269100 Sobic005G006400--Sobic007G035200 Sobic005G006400--Sobic003G007650 Sobic005G006400--Sobic010G240300 Sobic005G006400--Sobic008G086500 Sobic005G006400--Sobic002G194201 Sobic007G134501 Sobic007G134501 Sobic005G006400--Sobic007G134501 Sobic005G006400--Sobic005G006100 Sobic005G006400--Sobic007G014000 Sobic005G006400--Sobic010G216100
Octagon: transcription factors


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