Gene annotation
Transcriptome id Sobic.001G329200.2,Sobic.001G329200.1
Synonym Sb01g031830
Functional annotation rab GDP dissociation inhibitor alpha, putative, expressed
UniProt C5WVL2 , A0A1Z5S932
Pfam PF00996
Panther DB PTHR11787 PTHR11787:SF10
NCBI CDD -
KEGG Orthology K17255; Rab GDP dissociation inhibitor
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G09550 : GDP dissociation inhibitor family protein / Rab GTPase activator family protein
RAP-DB (Rice) LOC_Os03g16900.1 : rab GDP dissociation inhibitor alpha, putative, expressed
MaizeGDB (Corn) Zm00025a002987
Brachypodium KQK06220 , KQK22323
Barley HORVU4Hr1G059240.20 , HORVU4Hr1G059240.2 , HORVU4Hr1G059240.3 , HORVU4Hr1G059240.1 , HORVU4Hr1G059240.6 , HORVU4Hr1G059240.7 , HORVU4Hr1G059240.4 , HORVU4Hr1G059240.8 , HORVU4Hr1G059240.9 , HORVU4Hr1G059230.2 , HORVU4Hr1G059240.11 , HORVU4Hr1G059240.15 , HORVU4Hr1G059240.10 , HORVU4Hr1G059240.12 , HORVU4Hr1G059240.13 , HORVU4Hr1G059240.14 , HORVU4Hr1G059240.17 , HORVU4Hr1G059240.18 , HORVU4Hr1G059240.19
Wheat TraesCS5A02G041100 , TraesCS4A02G098400 , TraesCS4A02G098400 , TraesCS4B02G205900 , TraesCS4D02G206900 , TraesCS5B02G042400 , TraesCS5D02G048100
Populus -


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cDNA sequences
Sobic.001G329200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G175950 - -
2 Sobic.001G332000 pollen allergen, putative, expressed -
3 Sobic.001G287400 VQ domain containing protein, putative, expressed -
4 Sobic.001G171300 UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
5 Sobic.001G130500 - -
6 Sobic.005G040700 amino acid permease family protein, putative, expressed -
7 Sobic.001G261416 - K01858: INO1, myo-inositol-1-phosphate synthase
8 Sobic.001G165700 B3 DNA binding domain containing protein, expressed -
9 Sobic.001G269100 lysosomal alpha-mannosidase precursor, putative, expressed -
10 Sobic.010G051000 "domain confirmed by Pfam database, expressed in flower, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
11 Sobic.007G145500 adenylyl cyclase-associated protein, putative, expressed K17261: CAP1_2, adenylyl cyclase-associated protein
12 Sobic.010G090200 OsMADS63 - MADS-box family gene with MIKC , type-box, expressed -
13 Sobic.006G005300 erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15919: glyoxylate/hydroxypyruvate reductase
14 Sobic.009G203900 profilin domain containing protein, expressed K05759: profilin
15 Sobic.007G222100 - -
16 Sobic.010G215000 fasciclin-like arabinogalactan precursor protein, putative, expressed -
17 Sobic.001G306500 expansin precursor, putative, expressed -
18 Sobic.007G215200 "Ca ATPase, IIB type"(PubMedID : 22196357)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
19 Sobic.001G024900 expressed protein -
20 Sobic.002G082400 DUF567 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G329200 Sobic001G329200 Sobic003G175950 Sobic003G175950 Sobic001G329200--Sobic003G175950 Sobic001G332000 Sobic001G332000 Sobic001G329200--Sobic001G332000 Sobic001G287400 Sobic001G287400 Sobic001G329200--Sobic001G287400 Sobic001G171300 Sobic001G171300 Sobic001G329200--Sobic001G171300 Sobic001G130500 Sobic001G130500 Sobic001G329200--Sobic001G130500 Sobic005G040700 Sobic005G040700 Sobic001G329200--Sobic005G040700 Sobic001G261416 Sobic001G261416 Sobic001G329200--Sobic001G261416 Sobic001G165700 Sobic001G165700 Sobic001G329200--Sobic001G165700 Sobic001G269100 Sobic001G269100 Sobic001G329200--Sobic001G269100 Sobic003G175950--Sobic001G329200 Sobic003G175950--Sobic001G130500 Sobic003G175950--Sobic001G332000 Sobic003G175950--Sobic005G040700 Sobic003G175950--Sobic001G171300 Sobic003G175950--Sobic001G287400 Sobic003G175950--Sobic001G269100 Sobic010G051000 Sobic010G051000 Sobic003G175950--Sobic010G051000 Sobic003G175950--Sobic001G165700 Sobic001G332000--Sobic001G329200 Sobic001G332000--Sobic001G130500 Sobic001G332000--Sobic003G175950 Sobic001G332000--Sobic005G040700 Sobic001G332000--Sobic001G287400 Sobic001G332000--Sobic001G171300 Sobic001G332000--Sobic010G051000 Sobic001G332000--Sobic001G269100 Sobic001G332000--Sobic001G261416 Sobic001G287400--Sobic001G329200 Sobic001G287400--Sobic001G171300 Sobic001G287400--Sobic003G175950 Sobic001G287400--Sobic001G332000 Sobic001G287400--Sobic001G261416 Sobic001G287400--Sobic001G130500 Sobic001G287400--Sobic001G165700 Sobic001G287400--Sobic005G040700 Sobic001G287400--Sobic001G269100 Sobic001G171300--Sobic001G165700 Sobic001G171300--Sobic001G329200 Sobic001G171300--Sobic001G287400 Sobic001G171300--Sobic001G261416 Sobic001G171300--Sobic003G175950 Sobic001G171300--Sobic001G130500 Sobic010G215000 Sobic010G215000 Sobic001G171300--Sobic010G215000 Sobic007G145500 Sobic007G145500 Sobic001G171300--Sobic007G145500 Sobic001G171300--Sobic001G332000 Sobic001G130500--Sobic003G175950 Sobic001G130500--Sobic001G329200 Sobic001G130500--Sobic001G332000 Sobic001G130500--Sobic005G040700 Sobic001G130500--Sobic001G171300 Sobic001G130500--Sobic001G287400 Sobic001G130500--Sobic010G051000 Sobic001G130500--Sobic001G269100 Sobic001G130500--Sobic001G165700 Sobic005G040700--Sobic003G175950 Sobic005G040700--Sobic001G332000 Sobic005G040700--Sobic010G051000 Sobic005G040700--Sobic001G130500 Sobic005G040700--Sobic001G329200 Sobic005G040700--Sobic001G269100 Sobic007G222100 Sobic007G222100 Sobic005G040700--Sobic007G222100 Sobic005G040700--Sobic001G287400 Sobic001G306500 Sobic001G306500 Sobic005G040700--Sobic001G306500 Sobic010G090200 Sobic010G090200 Sobic001G261416--Sobic010G090200 Sobic001G261416--Sobic001G171300 Sobic001G261416--Sobic001G287400 Sobic001G261416--Sobic001G329200 Sobic007G014000 Sobic007G014000 Sobic001G261416--Sobic007G014000 Sobic001G261416--Sobic001G165700 Sobic010G216100 Sobic010G216100 Sobic001G261416--Sobic010G216100 Sobic010G207800 Sobic010G207800 Sobic001G261416--Sobic010G207800 Sobic001G261416--Sobic010G215000 Sobic001G165700--Sobic001G171300 Sobic001G165700--Sobic010G215000 Sobic001G165700--Sobic003G175950 Sobic001G165700--Sobic001G329200 Sobic003G445300 Sobic003G445300 Sobic001G165700--Sobic003G445300 Sobic001G165700--Sobic001G287400 Sobic001G165700--Sobic001G261416 Sobic001G165700--Sobic007G145500 Sobic005G220400 Sobic005G220400 Sobic001G165700--Sobic005G220400 Sobic001G269100--Sobic003G175950 Sobic001G269100--Sobic005G040700 Sobic001G269100--Sobic001G329200 Sobic001G269100--Sobic010G051000 Sobic009G203900 Sobic009G203900 Sobic001G269100--Sobic009G203900 Sobic001G269100--Sobic001G130500 Sobic001G269100--Sobic007G222100 Sobic001G269100--Sobic001G287400 Sobic001G269100--Sobic001G171300
Octagon: transcription factors


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