Gene annotation
Transcriptome id Sobic.001G269100.2
Synonym
Functional annotation lysosomal alpha-mannosidase precursor, putative, expressed
UniProt A0A1Z5S7R6
Pfam PF09261 PF01074 PF07748
Panther DB PTHR11607 PTHR11607:SF18
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds GO:0005975carbohydrate metabolic process GO:0004559alpha-mannosidase activity GO:0015923mannosidase activity GO:0006013mannose metabolic process


Orthologs (automatic annotation)
TAIR AT5G66150 : Glycosyl hydrolase family 38 protein
RAP-DB (Rice) LOC_Os10g05069.1 : lysosomal alpha-mannosidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a003725 , Zm00025a003751 , Zm00025a003741
Brachypodium KQJ96121 , PNT63560 , PNT63561 , KQJ88371
Barley HORVU5Hr1G113880.38 , HORVU5Hr1G113880.34 , HORVU5Hr1G113880.37 , HORVU5Hr1G113880.30 , HORVU5Hr1G113880.32 , HORVU5Hr1G113880.33 , HORVU5Hr1G113880.4 , HORVU5Hr1G113880.7 , HORVU5Hr1G113880.1 , HORVU5Hr1G113880.2 , HORVU5Hr1G113880.3 , HORVU5Hr1G113880.8 , HORVU5Hr1G113880.9 , HORVU5Hr1G113880.16 , HORVU5Hr1G113880.17 , HORVU5Hr1G113880.14 , HORVU5Hr1G113880.15 , HORVU5Hr1G113880.12 , HORVU5Hr1G113880.13 , HORVU5Hr1G113880.10 , HORVU5Hr1G113880.11 , HORVU5Hr1G113880.18 , HORVU5Hr1G113880.19 , HORVU5Hr1G113880.29 , HORVU5Hr1G113880.28 , HORVU5Hr1G113880.27 , HORVU5Hr1G113880.26 , HORVU5Hr1G113880.25 , HORVU5Hr1G113880.24 , HORVU5Hr1G113880.23 , HORVU5Hr1G113880.22 , HORVU5Hr1G113880.21 , HORVU5Hr1G113880.20
Wheat TraesCS5B02G496400 , TraesCS5B02G496400 , TraesCS1B02G106500 , TraesCS1B02G106400 , TraesCS1B02G106400 , TraesCS5D02G496800 , TraesCS5D02G496800 , TraesCS1A02G087500 , TraesCS1A02G087500 , TraesCS5A02G483300 , TraesCS2A02G451000 , TraesCS1D02G088800 , TraesCS1D02G088800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G175950 - -
2 Sobic.005G040700 amino acid permease family protein, putative, expressed -
3 Sobic.001G329200 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
4 Sobic.010G051000 "domain confirmed by Pfam database, expressed in flower, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
5 Sobic.009G203900 profilin domain containing protein, expressed K05759: profilin
6 Sobic.001G130500 - -
7 Sobic.007G222100 - -
8 Sobic.001G287400 VQ domain containing protein, putative, expressed -
9 Sobic.001G171300 UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
10 Sobic.001G332000 pollen allergen, putative, expressed -
11 Sobic.001G165700 B3 DNA binding domain containing protein, expressed -
12 Sobic.003G175600 plant protein of unknown function domain containing protein, expressed -
13 Sobic.001G024900 expressed protein -
14 Sobic.001G306500 expansin precursor, putative, expressed -
15 Sobic.002G082400 DUF567 domain containing protein, putative, expressed -
16 Sobic.004G100900 tetratricopeptide repeat domain containing protein, expressed -
17 Sobic.001G288400 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
18 Sobic.007G145500 adenylyl cyclase-associated protein, putative, expressed K17261: CAP1_2, adenylyl cyclase-associated protein
19 Sobic.003G445300 aquaporin protein, putative, expressed K09873: aquaporin TIP
20 Sobic.002G053800 glycosyl hydrolase family 10 protein, putative, expressed -


Gene co-expression network
sample Sobic001G269100 Sobic001G269100 Sobic003G175950 Sobic003G175950 Sobic001G269100--Sobic003G175950 Sobic005G040700 Sobic005G040700 Sobic001G269100--Sobic005G040700 Sobic001G329200 Sobic001G329200 Sobic001G269100--Sobic001G329200 Sobic010G051000 Sobic010G051000 Sobic001G269100--Sobic010G051000 Sobic009G203900 Sobic009G203900 Sobic001G269100--Sobic009G203900 Sobic001G130500 Sobic001G130500 Sobic001G269100--Sobic001G130500 Sobic007G222100 Sobic007G222100 Sobic001G269100--Sobic007G222100 Sobic001G287400 Sobic001G287400 Sobic001G269100--Sobic001G287400 Sobic001G171300 Sobic001G171300 Sobic001G269100--Sobic001G171300 Sobic003G175950--Sobic001G329200 Sobic003G175950--Sobic001G130500 Sobic001G332000 Sobic001G332000 Sobic003G175950--Sobic001G332000 Sobic003G175950--Sobic005G040700 Sobic003G175950--Sobic001G171300 Sobic003G175950--Sobic001G287400 Sobic003G175950--Sobic001G269100 Sobic003G175950--Sobic010G051000 Sobic001G165700 Sobic001G165700 Sobic003G175950--Sobic001G165700 Sobic005G040700--Sobic003G175950 Sobic005G040700--Sobic001G332000 Sobic005G040700--Sobic010G051000 Sobic005G040700--Sobic001G130500 Sobic005G040700--Sobic001G329200 Sobic005G040700--Sobic001G269100 Sobic005G040700--Sobic007G222100 Sobic005G040700--Sobic001G287400 Sobic001G306500 Sobic001G306500 Sobic005G040700--Sobic001G306500 Sobic001G329200--Sobic003G175950 Sobic001G329200--Sobic001G332000 Sobic001G329200--Sobic001G287400 Sobic001G329200--Sobic001G171300 Sobic001G329200--Sobic001G130500 Sobic001G329200--Sobic005G040700 Sobic001G261416 Sobic001G261416 Sobic001G329200--Sobic001G261416 Sobic001G329200--Sobic001G165700 Sobic001G329200--Sobic001G269100 Sobic010G051000--Sobic007G222100 Sobic010G051000--Sobic001G306500 Sobic001G024900 Sobic001G024900 Sobic010G051000--Sobic001G024900 Sobic001G288400 Sobic001G288400 Sobic010G051000--Sobic001G288400 Sobic010G051000--Sobic005G040700 Sobic010G051000--Sobic009G203900 Sobic010G051000--Sobic003G175950 Sobic010G051000--Sobic001G130500 Sobic004G100900 Sobic004G100900 Sobic010G051000--Sobic004G100900 Sobic009G203900--Sobic007G222100 Sobic002G053800 Sobic002G053800 Sobic009G203900--Sobic002G053800 Sobic009G203900--Sobic001G024900 Sobic009G203900--Sobic010G051000 Sobic003G175600 Sobic003G175600 Sobic009G203900--Sobic003G175600 Sobic004G293300 Sobic004G293300 Sobic009G203900--Sobic004G293300 Sobic009G203900--Sobic001G306500 Sobic001G269800 Sobic001G269800 Sobic009G203900--Sobic001G269800 Sobic010G091800 Sobic010G091800 Sobic009G203900--Sobic010G091800 Sobic001G130500--Sobic003G175950 Sobic001G130500--Sobic001G329200 Sobic001G130500--Sobic001G332000 Sobic001G130500--Sobic005G040700 Sobic001G130500--Sobic001G171300 Sobic001G130500--Sobic001G287400 Sobic001G130500--Sobic010G051000 Sobic001G130500--Sobic001G269100 Sobic001G130500--Sobic001G165700 Sobic007G222100--Sobic001G024900 Sobic007G222100--Sobic010G051000 Sobic007G222100--Sobic001G306500 Sobic007G222100--Sobic009G203900 Sobic007G222100--Sobic001G288400 Sobic007G222100--Sobic004G100900 Sobic007G222100--Sobic001G269800 Sobic007G222100--Sobic005G040700 Sobic001G306400 Sobic001G306400 Sobic007G222100--Sobic001G306400 Sobic001G287400--Sobic001G329200 Sobic001G287400--Sobic001G171300 Sobic001G287400--Sobic003G175950 Sobic001G287400--Sobic001G332000 Sobic001G287400--Sobic001G261416 Sobic001G287400--Sobic001G130500 Sobic001G287400--Sobic001G165700 Sobic001G287400--Sobic005G040700 Sobic001G287400--Sobic001G269100 Sobic001G171300--Sobic001G165700 Sobic001G171300--Sobic001G329200 Sobic001G171300--Sobic001G287400 Sobic001G171300--Sobic001G261416 Sobic001G171300--Sobic003G175950 Sobic001G171300--Sobic001G130500 Sobic010G215000 Sobic010G215000 Sobic001G171300--Sobic010G215000 Sobic007G145500 Sobic007G145500 Sobic001G171300--Sobic007G145500 Sobic001G171300--Sobic001G332000
Octagon: transcription factors


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