Gene annotation
Transcriptome id Sobic.002G053800.2,Sobic.002G053800.1
Synonym Sb02g004490
Functional annotation glycosyl hydrolase family 10 protein, putative, expressed
UniProt A0A1B6Q9D2 , C5XB20
Pfam PF00331
Panther DB PTHR31490 PTHR31490:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT4G33830 : Glycosyl hydrolase family 10 protein
RAP-DB (Rice) LOC_Os10g21110.1 : glycosyl hydrolase family 10 protein, putative, expressed
MaizeGDB (Corn) Zm00025a001161 , Zm00025a003966 , Zm00025a053144 , Zm00025a053145
Brachypodium PNT76981 , KQK23061 , KQK23063 , PNT67306
Barley HORVU4Hr1G070310.20 , HORVU4Hr1G070310.21 , HORVU4Hr1G070310.22 , HORVU1Hr1G023120.3 , HORVU1Hr1G023120.2 , HORVU1Hr1G023120.1 , HORVU4Hr1G070310.19 , HORVU4Hr1G070310.18 , HORVU4Hr1G070310.11 , HORVU4Hr1G070310.13 , HORVU4Hr1G070310.12 , HORVU4Hr1G070310.15 , HORVU4Hr1G070310.14 , HORVU2Hr1G113150.1 , HORVU4Hr1G070260.11 , HORVU4Hr1G070260.10 , HORVU4Hr1G070260.13 , HORVU4Hr1G070260.12 , HORVU4Hr1G070260.15 , HORVU4Hr1G070260.14 , HORVU2Hr1G122890.1 , HORVU2Hr1G122890.2 , HORVU2Hr1G122890.3 , HORVU2Hr1G122890.5 , HORVU2Hr1G122890.6 , HORVU2Hr1G122890.4
Wheat TraesCS4B02G259100 , TraesCS4D02G259100 , TraesCSU02G021800 , TraesCS5D02G194800 , TraesCS4D02G259500 , TraesCS1D02G107700 , TraesCS1A02G107100 , TraesCS5A02G196500 , TraesCS2A02G584800 , TraesCS4A02G045800 , TraesCS4B02G259400 , TraesCS5A02G196600 , TraesCS1B02G124500 , TraesCS4A02G045500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G091800 expressed protein -
2 Sobic.004G293300 zinc-binding protein, putative, expressed -
3 Sobic.008G017500 - -
4 Sobic.009G203900 profilin domain containing protein, expressed K05759: profilin
5 Sobic.008G154300 flavin monooxygenase, putative, expressed -
6 Sobic.001G269800 - -
7 Sobic.003G175600 plant protein of unknown function domain containing protein, expressed -
8 Sobic.006G282100 DNA binding protein, putative, expressed -
9 Sobic.001G306400 expansin precursor, putative, expressed -
10 Sobic.003G394801 - -
11 Sobic.005G142400 plant protein of unknown function domain containing protein, expressed -
12 Sobic.007G222100 - -
13 Sobic.001G306200 expansin precursor, putative, expressed -
14 Sobic.002G082400 DUF567 domain containing protein, putative, expressed -
15 Sobic.001G024900 expressed protein -
16 Sobic.005G220500 pollen allergen, putative, expressed -
17 Sobic.007G167000 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
18 Sobic.009G169500 DEFL4 - Defensin and Defensin-like DEFL family, expressed -
19 Sobic.009G091300 - -
20 Sobic.001G269600 - -


Gene co-expression network
sample Sobic002G053800 Sobic002G053800 Sobic010G091800 Sobic010G091800 Sobic002G053800--Sobic010G091800 Sobic004G293300 Sobic004G293300 Sobic002G053800--Sobic004G293300 Sobic008G017500 Sobic008G017500 Sobic002G053800--Sobic008G017500 Sobic009G203900 Sobic009G203900 Sobic002G053800--Sobic009G203900 Sobic008G154300 Sobic008G154300 Sobic002G053800--Sobic008G154300 Sobic001G269800 Sobic001G269800 Sobic002G053800--Sobic001G269800 Sobic003G175600 Sobic003G175600 Sobic002G053800--Sobic003G175600 Sobic006G282100 Sobic006G282100 Sobic002G053800--Sobic006G282100 Sobic001G306400 Sobic001G306400 Sobic002G053800--Sobic001G306400 Sobic010G091800--Sobic002G053800 Sobic010G091800--Sobic008G154300 Sobic010G091800--Sobic004G293300 Sobic010G091800--Sobic001G269800 Sobic003G394801 Sobic003G394801 Sobic010G091800--Sobic003G394801 Sobic010G091800--Sobic008G017500 Sobic001G306200 Sobic001G306200 Sobic010G091800--Sobic001G306200 Sobic005G142400 Sobic005G142400 Sobic010G091800--Sobic005G142400 Sobic010G091800--Sobic003G175600 Sobic004G293300--Sobic002G053800 Sobic004G293300--Sobic010G091800 Sobic004G293300--Sobic009G203900 Sobic004G293300--Sobic001G269800 Sobic004G293300--Sobic003G175600 Sobic004G293300--Sobic008G017500 Sobic004G293300--Sobic006G282100 Sobic004G293300--Sobic008G154300 Sobic004G293300--Sobic003G394801 Sobic008G017500--Sobic008G154300 Sobic008G017500--Sobic002G053800 Sobic008G017500--Sobic010G091800 Sobic008G017500--Sobic005G142400 Sobic008G017500--Sobic001G306400 Sobic008G017500--Sobic004G293300 Sobic008G017500--Sobic003G394801 Sobic008G017500--Sobic001G306200 Sobic008G017500--Sobic001G269800 Sobic007G222100 Sobic007G222100 Sobic009G203900--Sobic007G222100 Sobic009G203900--Sobic002G053800 Sobic001G024900 Sobic001G024900 Sobic009G203900--Sobic001G024900 Sobic010G051000 Sobic010G051000 Sobic009G203900--Sobic010G051000 Sobic009G203900--Sobic003G175600 Sobic009G203900--Sobic004G293300 Sobic001G306500 Sobic001G306500 Sobic009G203900--Sobic001G306500 Sobic009G203900--Sobic001G269800 Sobic009G203900--Sobic010G091800 Sobic008G154300--Sobic005G142400 Sobic008G154300--Sobic001G306200 Sobic008G154300--Sobic008G017500 Sobic008G154300--Sobic010G091800 Sobic008G154300--Sobic003G394801 Sobic008G154300--Sobic001G306400 Sobic009G169500 Sobic009G169500 Sobic008G154300--Sobic009G169500 Sobic008G154300--Sobic002G053800 Sobic008G154300--Sobic001G269800 Sobic001G269800--Sobic010G091800 Sobic001G269800--Sobic001G306400 Sobic001G269800--Sobic008G154300 Sobic001G269800--Sobic005G142400 Sobic009G091300 Sobic009G091300 Sobic001G269800--Sobic009G091300 Sobic001G269800--Sobic002G053800 Sobic001G269800--Sobic004G293300 Sobic001G269800--Sobic009G203900 Sobic001G269800--Sobic001G024900 Sobic005G220500 Sobic005G220500 Sobic003G175600--Sobic005G220500 Sobic002G082400 Sobic002G082400 Sobic003G175600--Sobic002G082400 Sobic003G175600--Sobic009G203900 Sobic003G175600--Sobic002G053800 Sobic003G175600--Sobic004G293300 Sobic003G175600--Sobic010G091800 Sobic007G167000 Sobic007G167000 Sobic003G175600--Sobic007G167000 Sobic001G269200 Sobic001G269200 Sobic003G175600--Sobic001G269200 Sobic003G445300 Sobic003G445300 Sobic003G175600--Sobic003G445300 Sobic006G282100--Sobic004G293300 Sobic006G282100--Sobic002G053800 Sobic006G282100--Sobic009G203900 Sobic006G282100--Sobic010G091800 Sobic006G282100--Sobic008G017500 Sobic006G282100--Sobic001G269800 Sobic006G282100--Sobic008G154300 Sobic006G282100--Sobic007G222100 Sobic006G282100--Sobic001G306400 Sobic001G306400--Sobic005G142400 Sobic001G306400--Sobic008G154300 Sobic006G159000 Sobic006G159000 Sobic001G306400--Sobic006G159000 Sobic001G306400--Sobic001G269800 Sobic001G306400--Sobic008G017500 Sobic001G306400--Sobic001G024900 Sobic001G306400--Sobic002G053800 Sobic001G306400--Sobic010G091800 Sobic001G306400--Sobic001G306500
Octagon: transcription factors


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