Gene annotation
Transcriptome id Sobic.003G445300.2
Synonym ATTIP1.3, GAMMA-TIP3, 3, TIP1, Sb03g047470
Functional annotation aquaporin protein, putative, expressed
UniProt C5XJF3
Pfam PF00230
Panther DB PTHR19139 PTHR19139:SF55
NCBI CDD KOG0223; Aquaporin (major intrinsic protein family)
KEGG Orthology K09873; aquaporin TIP
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT4G01470 : tonoplast intrinsic protein 1;3
RAP-DB (Rice) LOC_Os01g74450.1 : aquaporin protein, putative, expressed
MaizeGDB (Corn) Zm00025a039037 , Zm00025a010306 , Zm00025a000620 , Zm00025a020879 , Zm00025a032208
Brachypodium KQK11808 , KQK23668 , KQK00616
Barley HORVU3Hr1G116790.5 , HORVU3Hr1G116790.1 , HORVU4Hr1G079230.4 , HORVU3Hr1G116790.3 , HORVU3Hr1G116790.2 , HORVU4Hr1G079230.1 , HORVU3Hr1G116790.4 , HORVU3Hr1G116790.7 , HORVU3Hr1G116790.6 , HORVU3Hr1G116790.9 , HORVU3Hr1G116790.8 , HORVU4Hr1G079230.2 , HORVU3Hr1G116790.11 , HORVU3Hr1G116790.10 , HORVU3Hr1G116790.12
Wheat TraesCS4A02G410800 , TraesCS4B02G310900 , TraesCS3D02G540900 , TraesCS3A02G535300 , TraesCS3B02G608500 , TraesCS4D02G308800
Populus -


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cDNA sequences
Sobic.003G445300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G220400 pollen allergen, putative, expressed -
2 Sobic.002G082400 DUF567 domain containing protein, putative, expressed -
3 Sobic.005G220500 pollen allergen, putative, expressed -
4 Sobic.002G414000 - -
5 Sobic.001G269200 "GDSL-like lipase/acylhydrolase, is the most likely gene associated with epicuticular wax deposition."(PubMedID : 28702690)@GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.006G043101 - -
7 Sobic.005G214800 - -
8 Sobic.001G246001 - K10523: speckle-type POZ protein
9 Sobic.001G165700 B3 DNA binding domain containing protein, expressed -
10 Sobic.010G215000 fasciclin-like arabinogalactan precursor protein, putative, expressed -
11 Sobic.003G175600 plant protein of unknown function domain containing protein, expressed -
12 Sobic.007G160501 - -
13 Sobic.009G110800 OsFBX430 - F-box domain containing protein, expressed -
14 Sobic.010G107800 - -
15 Sobic.007G129800 expressed protein -
16 Sobic.007G167000 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
17 Sobic.001G171300 UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
18 Sobic.001G041600 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2
19 Sobic.008G125801 - -
20 Sobic.007G095333 - -


Gene co-expression network
sample Sobic003G445300 Sobic003G445300 Sobic005G220400 Sobic005G220400 Sobic003G445300--Sobic005G220400 Sobic002G082400 Sobic002G082400 Sobic003G445300--Sobic002G082400 Sobic005G220500 Sobic005G220500 Sobic003G445300--Sobic005G220500 Sobic002G414000 Sobic002G414000 Sobic003G445300--Sobic002G414000 Sobic001G269200 Sobic001G269200 Sobic003G445300--Sobic001G269200 Sobic006G043101 Sobic006G043101 Sobic003G445300--Sobic006G043101 Sobic005G214800 Sobic005G214800 Sobic003G445300--Sobic005G214800 Sobic001G246001 Sobic001G246001 Sobic003G445300--Sobic001G246001 Sobic001G165700 Sobic001G165700 Sobic003G445300--Sobic001G165700 Sobic005G220400--Sobic003G445300 Sobic005G220400--Sobic002G082400 Sobic005G220400--Sobic002G414000 Sobic005G220400--Sobic005G220500 Sobic005G220400--Sobic006G043101 Sobic005G220400--Sobic001G269200 Sobic005G220400--Sobic005G214800 Sobic005G220400--Sobic001G246001 Sobic010G215000 Sobic010G215000 Sobic005G220400--Sobic010G215000 Sobic002G082400--Sobic005G220500 Sobic002G082400--Sobic003G445300 Sobic002G082400--Sobic005G220400 Sobic002G082400--Sobic001G269200 Sobic003G175600 Sobic003G175600 Sobic002G082400--Sobic003G175600 Sobic002G082400--Sobic002G414000 Sobic002G082400--Sobic006G043101 Sobic007G167000 Sobic007G167000 Sobic002G082400--Sobic007G167000 Sobic002G082400--Sobic001G165700 Sobic005G220500--Sobic002G082400 Sobic005G220500--Sobic001G269200 Sobic005G220500--Sobic003G445300 Sobic005G220500--Sobic005G220400 Sobic005G220500--Sobic002G414000 Sobic005G220500--Sobic003G175600 Sobic005G220500--Sobic007G167000 Sobic005G220500--Sobic006G043101 Sobic010G107800 Sobic010G107800 Sobic005G220500--Sobic010G107800 Sobic002G414000--Sobic006G043101 Sobic002G414000--Sobic005G214800 Sobic002G414000--Sobic001G246001 Sobic002G414000--Sobic005G220400 Sobic002G414000--Sobic001G269200 Sobic002G414000--Sobic003G445300 Sobic002G414000--Sobic005G220500 Sobic002G414000--Sobic010G107800 Sobic002G414000--Sobic002G082400 Sobic001G269200--Sobic005G220500 Sobic001G269200--Sobic010G107800 Sobic007G129800 Sobic007G129800 Sobic001G269200--Sobic007G129800 Sobic001G269200--Sobic002G414000 Sobic001G269200--Sobic002G082400 Sobic001G269200--Sobic007G167000 Sobic001G269200--Sobic003G445300 Sobic001G269200--Sobic006G043101 Sobic001G269200--Sobic005G220400 Sobic006G043101--Sobic002G414000 Sobic006G043101--Sobic005G214800 Sobic006G043101--Sobic001G246001 Sobic006G043101--Sobic001G269200 Sobic006G043101--Sobic005G220400 Sobic006G043101--Sobic003G445300 Sobic006G043101--Sobic005G220500 Sobic006G043101--Sobic010G107800 Sobic006G043101--Sobic002G082400 Sobic005G214800--Sobic001G246001 Sobic005G214800--Sobic002G414000 Sobic007G160501 Sobic007G160501 Sobic005G214800--Sobic007G160501 Sobic005G214800--Sobic006G043101 Sobic009G110800 Sobic009G110800 Sobic005G214800--Sobic009G110800 Sobic005G214800--Sobic003G445300 Sobic005G214800--Sobic005G220400 Sobic005G214800--Sobic005G220500 Sobic005G214800--Sobic001G269200 Sobic001G246001--Sobic001G246001 Sobic001G246001--Sobic002G414000 Sobic001G246001--Sobic007G160501 Sobic001G246001--Sobic006G043101 Sobic001G246001--Sobic009G110800 Sobic001G246001--Sobic003G445300 Sobic001G246001--Sobic005G220400 Sobic001G246001--Sobic005G220500 Sobic001G246001--Sobic001G269200 Sobic001G171300 Sobic001G171300 Sobic001G165700--Sobic001G171300 Sobic001G165700--Sobic010G215000 Sobic003G175950 Sobic003G175950 Sobic001G165700--Sobic003G175950 Sobic001G329200 Sobic001G329200 Sobic001G165700--Sobic001G329200 Sobic001G165700--Sobic003G445300 Sobic001G287400 Sobic001G287400 Sobic001G165700--Sobic001G287400 Sobic001G261416 Sobic001G261416 Sobic001G165700--Sobic001G261416 Sobic007G145500 Sobic007G145500 Sobic001G165700--Sobic007G145500 Sobic001G165700--Sobic005G220400
Octagon: transcription factors


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