Gene annotation
Transcriptome id Sobic.001G246001.1
Synonym -
Functional annotation -
UniProt A0A1Z5S769
Pfam PF00651
Panther DB PTHR26379 PTHR26379:SF173
NCBI CDD -
KEGG Orthology K10523; speckle-type POZ protein
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G19000 : BTB-POZ and MATH domain 1
RAP-DB (Rice) LOC_Os10g29380.1 : MBTB52 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G246001 - K10523: speckle-type POZ protein
2 Sobic.002G414000 - -
3 Sobic.007G160501 - -
4 Sobic.006G043101 - -
5 Sobic.009G110800 OsFBX430 - F-box domain containing protein, expressed -
6 Sobic.003G445300 aquaporin protein, putative, expressed K09873: aquaporin TIP
7 Sobic.005G220400 pollen allergen, putative, expressed -
8 Sobic.005G220500 pollen allergen, putative, expressed -
9 Sobic.001G269200 "GDSL-like lipase/acylhydrolase, is the most likely gene associated with epicuticular wax deposition."(PubMedID : 28702690)@GDSL-like lipase/acylhydrolase, putative, expressed -
10 Sobic.008G125801 - -
11 Sobic.003G351100 - -
12 Sobic.002G082400 DUF567 domain containing protein, putative, expressed -
13 Sobic.010G215000 fasciclin-like arabinogalactan precursor protein, putative, expressed -
14 Sobic.010G107800 - -
15 Sobic.002G194300 expressed protein -
16 Sobic.001G165700 B3 DNA binding domain containing protein, expressed -
17 Sobic.007G129800 expressed protein -
18 Sobic.007G095333 - -
19 Sobic.007G167000 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
20 Sobic.003G175600 plant protein of unknown function domain containing protein, expressed -


Gene co-expression network
sample Sobic001G246001 Sobic001G246001 Sobic001G246001--Sobic001G246001 Sobic002G414000 Sobic002G414000 Sobic001G246001--Sobic002G414000 Sobic007G160501 Sobic007G160501 Sobic001G246001--Sobic007G160501 Sobic006G043101 Sobic006G043101 Sobic001G246001--Sobic006G043101 Sobic009G110800 Sobic009G110800 Sobic001G246001--Sobic009G110800 Sobic003G445300 Sobic003G445300 Sobic001G246001--Sobic003G445300 Sobic005G220400 Sobic005G220400 Sobic001G246001--Sobic005G220400 Sobic005G220500 Sobic005G220500 Sobic001G246001--Sobic005G220500 Sobic001G269200 Sobic001G269200 Sobic001G246001--Sobic001G269200 Sobic002G414000--Sobic006G043101 Sobic005G214800 Sobic005G214800 Sobic002G414000--Sobic005G214800 Sobic002G414000--Sobic001G246001 Sobic002G414000--Sobic005G220400 Sobic002G414000--Sobic001G269200 Sobic002G414000--Sobic003G445300 Sobic002G414000--Sobic005G220500 Sobic010G107800 Sobic010G107800 Sobic002G414000--Sobic010G107800 Sobic002G082400 Sobic002G082400 Sobic002G414000--Sobic002G082400 Sobic003G351100 Sobic003G351100 Sobic007G160501--Sobic003G351100 Sobic007G160501--Sobic001G246001 Sobic007G160501--Sobic005G214800 Sobic007G160501--Sobic009G110800 Sobic010G215000 Sobic010G215000 Sobic007G160501--Sobic010G215000 Sobic008G125801 Sobic008G125801 Sobic007G160501--Sobic008G125801 Sobic002G194300 Sobic002G194300 Sobic007G160501--Sobic002G194300 Sobic007G160501--Sobic002G414000 Sobic007G160501--Sobic006G043101 Sobic006G043101--Sobic002G414000 Sobic006G043101--Sobic005G214800 Sobic006G043101--Sobic001G246001 Sobic006G043101--Sobic001G269200 Sobic006G043101--Sobic005G220400 Sobic006G043101--Sobic003G445300 Sobic006G043101--Sobic005G220500 Sobic006G043101--Sobic010G107800 Sobic006G043101--Sobic002G082400 Sobic009G110800--Sobic001G246001 Sobic009G110800--Sobic005G214800 Sobic009G110800--Sobic007G160501 Sobic009G110800--Sobic002G414000 Sobic009G110800--Sobic006G043101 Sobic009G110800--Sobic003G351100 Sobic009G110800--Sobic003G445300 Sobic009G110800--Sobic005G220400 Sobic009G110800--Sobic008G125801 Sobic003G445300--Sobic005G220400 Sobic003G445300--Sobic002G082400 Sobic003G445300--Sobic005G220500 Sobic003G445300--Sobic002G414000 Sobic003G445300--Sobic001G269200 Sobic003G445300--Sobic006G043101 Sobic003G445300--Sobic005G214800 Sobic003G445300--Sobic001G246001 Sobic001G165700 Sobic001G165700 Sobic003G445300--Sobic001G165700 Sobic005G220400--Sobic003G445300 Sobic005G220400--Sobic002G082400 Sobic005G220400--Sobic002G414000 Sobic005G220400--Sobic005G220500 Sobic005G220400--Sobic006G043101 Sobic005G220400--Sobic001G269200 Sobic005G220400--Sobic005G214800 Sobic005G220400--Sobic001G246001 Sobic005G220400--Sobic010G215000 Sobic005G220500--Sobic002G082400 Sobic005G220500--Sobic001G269200 Sobic005G220500--Sobic003G445300 Sobic005G220500--Sobic005G220400 Sobic005G220500--Sobic002G414000 Sobic003G175600 Sobic003G175600 Sobic005G220500--Sobic003G175600 Sobic007G167000 Sobic007G167000 Sobic005G220500--Sobic007G167000 Sobic005G220500--Sobic006G043101 Sobic005G220500--Sobic010G107800 Sobic001G269200--Sobic005G220500 Sobic001G269200--Sobic010G107800 Sobic007G129800 Sobic007G129800 Sobic001G269200--Sobic007G129800 Sobic001G269200--Sobic002G414000 Sobic001G269200--Sobic002G082400 Sobic001G269200--Sobic007G167000 Sobic001G269200--Sobic003G445300 Sobic001G269200--Sobic006G043101 Sobic001G269200--Sobic005G220400
Octagon: transcription factors


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