Gene annotation
Transcriptome id Sobic.001G269200.1
Synonym bm39
Functional annotation "GDSL-like lipase/acylhydrolase, is the most likely gene associated with epicuticular wax deposition." (PubMedID : 28702690)
GDSL-like lipase/acylhydrolase, putative, expressed
UniProt A0A1B6QLC4
Pfam PF00657
Panther DB PTHR22835:SF217 PTHR22835
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT1G75900 : GDSL-like Lipase/Acylhydrolase superfamily protein
RAP-DB (Rice) LOC_Os10g05088.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a017963
Brachypodium KQK19861 , PNT76634 , PNT76635
Barley HORVU6Hr1G018750.1 , HORVU0Hr1G019420.1 , HORVU7Hr1G021620.3 , HORVU7Hr1G021620.1 , HORVU7Hr1G021620.2 , HORVU7Hr1G021620.4 , HORVU7Hr1G021620.5 , HORVU7Hr1G021620.6
Wheat TraesCS7A02G100600 , TraesCS7A02G100600 , TraesCS6A02G104300 , TraesCS2A02G279600 , TraesCS6D02G093000 , TraesCS4A02G399300 , TraesCS3D02G431500 , TraesCS3D02G431500 , TraesCS7D02G094900
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G220500 pollen allergen, putative, expressed -
2 Sobic.010G107800 - -
3 Sobic.007G129800 expressed protein -
4 Sobic.002G414000 - -
5 Sobic.002G082400 DUF567 domain containing protein, putative, expressed -
6 Sobic.007G167000 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
7 Sobic.003G445300 aquaporin protein, putative, expressed K09873: aquaporin TIP
8 Sobic.006G043101 - -
9 Sobic.005G220400 pollen allergen, putative, expressed -
10 Sobic.005G214800 - -
11 Sobic.001G246001 - K10523: speckle-type POZ protein
12 Sobic.001G269600 - -
13 Sobic.002G414300 - -
14 Sobic.003G175600 plant protein of unknown function domain containing protein, expressed -
15 Sobic.001G269700 - -
16 Sobic.002G053800 glycosyl hydrolase family 10 protein, putative, expressed -
17 Sobic.009G110800 OsFBX430 - F-box domain containing protein, expressed -
18 Sobic.004G293300 zinc-binding protein, putative, expressed -
19 Sobic.001G269400 - -
20 Sobic.001G041600 clathrin adaptor complex small chain domain containing protein, expressed K12394: AP-1 complex subunit sigma 1/2


Gene co-expression network
sample Sobic001G269200 Sobic001G269200 Sobic005G220500 Sobic005G220500 Sobic001G269200--Sobic005G220500 Sobic010G107800 Sobic010G107800 Sobic001G269200--Sobic010G107800 Sobic007G129800 Sobic007G129800 Sobic001G269200--Sobic007G129800 Sobic002G414000 Sobic002G414000 Sobic001G269200--Sobic002G414000 Sobic002G082400 Sobic002G082400 Sobic001G269200--Sobic002G082400 Sobic007G167000 Sobic007G167000 Sobic001G269200--Sobic007G167000 Sobic003G445300 Sobic003G445300 Sobic001G269200--Sobic003G445300 Sobic006G043101 Sobic006G043101 Sobic001G269200--Sobic006G043101 Sobic005G220400 Sobic005G220400 Sobic001G269200--Sobic005G220400 Sobic005G220500--Sobic002G082400 Sobic005G220500--Sobic001G269200 Sobic005G220500--Sobic003G445300 Sobic005G220500--Sobic005G220400 Sobic005G220500--Sobic002G414000 Sobic003G175600 Sobic003G175600 Sobic005G220500--Sobic003G175600 Sobic005G220500--Sobic007G167000 Sobic005G220500--Sobic006G043101 Sobic005G220500--Sobic010G107800 Sobic010G107800--Sobic007G129800 Sobic010G107800--Sobic001G269200 Sobic010G107800--Sobic007G167000 Sobic002G414300 Sobic002G414300 Sobic010G107800--Sobic002G414300 Sobic010G107800--Sobic002G414000 Sobic010G107800--Sobic005G220500 Sobic001G269700 Sobic001G269700 Sobic010G107800--Sobic001G269700 Sobic001G269600 Sobic001G269600 Sobic010G107800--Sobic001G269600 Sobic010G107800--Sobic006G043101 Sobic007G129800--Sobic010G107800 Sobic007G129800--Sobic001G269200 Sobic007G129800--Sobic002G414300 Sobic007G129800--Sobic007G167000 Sobic007G129800--Sobic002G414000 Sobic007G129800--Sobic005G220500 Sobic007G129800--Sobic001G269700 Sobic007G129800--Sobic001G269600 Sobic007G129800--Sobic006G043101 Sobic002G414000--Sobic006G043101 Sobic005G214800 Sobic005G214800 Sobic002G414000--Sobic005G214800 Sobic001G246001 Sobic001G246001 Sobic002G414000--Sobic001G246001 Sobic002G414000--Sobic005G220400 Sobic002G414000--Sobic001G269200 Sobic002G414000--Sobic003G445300 Sobic002G414000--Sobic005G220500 Sobic002G414000--Sobic010G107800 Sobic002G414000--Sobic002G082400 Sobic002G082400--Sobic005G220500 Sobic002G082400--Sobic003G445300 Sobic002G082400--Sobic005G220400 Sobic002G082400--Sobic001G269200 Sobic002G082400--Sobic003G175600 Sobic002G082400--Sobic002G414000 Sobic002G082400--Sobic006G043101 Sobic002G082400--Sobic007G167000 Sobic001G165700 Sobic001G165700 Sobic002G082400--Sobic001G165700 Sobic007G167000--Sobic001G269600 Sobic007G167000--Sobic001G269200 Sobic007G167000--Sobic010G107800 Sobic007G167000--Sobic001G269700 Sobic007G167000--Sobic002G414300 Sobic007G167000--Sobic005G220500 Sobic007G167000--Sobic007G129800 Sobic007G167000--Sobic002G082400 Sobic007G167000--Sobic003G175600 Sobic003G445300--Sobic005G220400 Sobic003G445300--Sobic002G082400 Sobic003G445300--Sobic005G220500 Sobic003G445300--Sobic002G414000 Sobic003G445300--Sobic001G269200 Sobic003G445300--Sobic006G043101 Sobic003G445300--Sobic005G214800 Sobic003G445300--Sobic001G246001 Sobic003G445300--Sobic001G165700 Sobic006G043101--Sobic002G414000 Sobic006G043101--Sobic005G214800 Sobic006G043101--Sobic001G246001 Sobic006G043101--Sobic001G269200 Sobic006G043101--Sobic005G220400 Sobic006G043101--Sobic003G445300 Sobic006G043101--Sobic005G220500 Sobic006G043101--Sobic010G107800 Sobic006G043101--Sobic002G082400 Sobic005G220400--Sobic003G445300 Sobic005G220400--Sobic002G082400 Sobic005G220400--Sobic002G414000 Sobic005G220400--Sobic005G220500 Sobic005G220400--Sobic006G043101 Sobic005G220400--Sobic001G269200 Sobic005G220400--Sobic005G214800 Sobic005G220400--Sobic001G246001 Sobic010G215000 Sobic010G215000 Sobic005G220400--Sobic010G215000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.