Gene annotation
Transcriptome id Sobic.010G051000.1
Synonym ATPIN7, Sb10g004430, PIN7, SbPIN9, efflux carriers pin-formed
Functional annotation "domain confirmed by Pfam database, expressed in flower, expression induced by IAA, BR and ABA treatments" (PubMedID : 20528920)
auxin efflux carrier component, putative, expressed
UniProt C5Z4U5
Pfam PF03547
Panther DB PTHR31752 PTHR31752:SF16
NCBI CDD -
KEGG Orthology K13947; auxin efflux carrier family protein
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G23080 : Auxin efflux carrier family protein
RAP-DB (Rice) LOC_Os05g50140.2 : auxin efflux carrier component, putative, expressed
MaizeGDB (Corn) Zm00025a033405 , Zm00025a022017 , Zm00025a028269 , Zm00025a033214 , Zm00025a049923
Brachypodium KQK04736 , KQK18833 , KQK01960 , KQK16936
Barley HORVU7Hr1G038700.5 , HORVU7Hr1G038700.9 , HORVU7Hr1G038700.8 , HORVU7Hr1G038700.1 , HORVU7Hr1G038700.3 , HORVU7Hr1G038700.2 , HORVU7Hr1G038700.20 , HORVU7Hr1G038700.21 , HORVU7Hr1G038700.23 , HORVU7Hr1G038700.24 , HORVU6Hr1G076110.7 , HORVU7Hr1G038700.19 , HORVU7Hr1G038700.18 , HORVU7Hr1G038700.15 , HORVU7Hr1G038700.14 , HORVU7Hr1G038700.17 , HORVU7Hr1G038700.16 , HORVU7Hr1G038700.13 , HORVU7Hr1G038700.12 , HORVU6Hr1G076110.9 , HORVU6Hr1G076110.8 , HORVU6Hr1G076110.13 , HORVU6Hr1G076110.12 , HORVU6Hr1G076110.11 , HORVU6Hr1G076110.10 , HORVU6Hr1G076110.17 , HORVU6Hr1G076110.16 , HORVU6Hr1G076110.15 , HORVU6Hr1G076110.14 , HORVU6Hr1G076110.2 , HORVU6Hr1G076110.1 , HORVU1Hr1G091030.8 , HORVU6Hr1G076110.6 , HORVU6Hr1G076110.5 , HORVU1Hr1G091030.4 , HORVU1Hr1G091030.5 , HORVU1Hr1G091030.6 , HORVU1Hr1G091030.7 , HORVU1Hr1G091030.1 , HORVU1Hr1G091030.2 , HORVU1Hr1G091030.3
Wheat TraesCS7D02G191600 , TraesCS6B02G337300 , TraesCS6A02G308600 , TraesCS6B02G337300 , TraesCS1A02G415400 , TraesCS6B02G337300 , TraesCS1B02G445400 , TraesCS7B02G095500 , TraesCS7A02G190600 , TraesCS6B02G337300 , TraesCS6D02G287800 , TraesCS7B02G398100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G222100 - -
2 Sobic.001G306500 expansin precursor, putative, expressed -
3 Sobic.001G024900 expressed protein -
4 Sobic.001G288400 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
5 Sobic.005G040700 amino acid permease family protein, putative, expressed -
6 Sobic.009G203900 profilin domain containing protein, expressed K05759: profilin
7 Sobic.003G175950 - -
8 Sobic.001G130500 - -
9 Sobic.004G100900 tetratricopeptide repeat domain containing protein, expressed -
10 Sobic.001G269100 lysosomal alpha-mannosidase precursor, putative, expressed -
11 Sobic.001G093100 anthocyanin 3-O-beta-glucosyltransferase, putative, expressed -
12 Sobic.001G332000 pollen allergen, putative, expressed -
13 Sobic.001G329200 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
14 Sobic.001G269800 - -
15 Sobic.010G144700 plant protein of unknown function domain containing protein, expressed -
16 Sobic.001G306400 expansin precursor, putative, expressed -
17 Sobic.002G053800 glycosyl hydrolase family 10 protein, putative, expressed -
18 Sobic.004G293300 zinc-binding protein, putative, expressed -
19 Sobic.001G287400 VQ domain containing protein, putative, expressed -
20 Sobic.003G175600 plant protein of unknown function domain containing protein, expressed -


Gene co-expression network
sample Sobic010G051000 Sobic010G051000 Sobic007G222100 Sobic007G222100 Sobic010G051000--Sobic007G222100 Sobic001G306500 Sobic001G306500 Sobic010G051000--Sobic001G306500 Sobic001G024900 Sobic001G024900 Sobic010G051000--Sobic001G024900 Sobic001G288400 Sobic001G288400 Sobic010G051000--Sobic001G288400 Sobic005G040700 Sobic005G040700 Sobic010G051000--Sobic005G040700 Sobic009G203900 Sobic009G203900 Sobic010G051000--Sobic009G203900 Sobic003G175950 Sobic003G175950 Sobic010G051000--Sobic003G175950 Sobic001G130500 Sobic001G130500 Sobic010G051000--Sobic001G130500 Sobic004G100900 Sobic004G100900 Sobic010G051000--Sobic004G100900 Sobic007G222100--Sobic001G024900 Sobic007G222100--Sobic010G051000 Sobic007G222100--Sobic001G306500 Sobic007G222100--Sobic009G203900 Sobic007G222100--Sobic001G288400 Sobic007G222100--Sobic004G100900 Sobic001G269800 Sobic001G269800 Sobic007G222100--Sobic001G269800 Sobic007G222100--Sobic005G040700 Sobic001G306400 Sobic001G306400 Sobic007G222100--Sobic001G306400 Sobic001G306500--Sobic001G024900 Sobic001G306500--Sobic007G222100 Sobic001G306500--Sobic001G288400 Sobic001G306500--Sobic010G051000 Sobic001G093100 Sobic001G093100 Sobic001G306500--Sobic001G093100 Sobic001G306500--Sobic009G203900 Sobic001G306500--Sobic004G100900 Sobic001G306500--Sobic001G306400 Sobic001G306500--Sobic005G040700 Sobic001G024900--Sobic001G306500 Sobic001G024900--Sobic007G222100 Sobic001G024900--Sobic001G288400 Sobic001G024900--Sobic010G051000 Sobic001G024900--Sobic009G203900 Sobic001G024900--Sobic004G100900 Sobic001G024900--Sobic001G306400 Sobic001G024900--Sobic001G093100 Sobic001G024900--Sobic001G269800 Sobic001G288400--Sobic001G306500 Sobic001G288400--Sobic001G024900 Sobic001G288400--Sobic007G222100 Sobic001G288400--Sobic010G051000 Sobic001G288400--Sobic001G093100 Sobic006G159000 Sobic006G159000 Sobic001G288400--Sobic006G159000 Sobic001G288400--Sobic004G100900 Sobic009G082900 Sobic009G082900 Sobic001G288400--Sobic009G082900 Sobic010G144700 Sobic010G144700 Sobic001G288400--Sobic010G144700 Sobic005G040700--Sobic003G175950 Sobic001G332000 Sobic001G332000 Sobic005G040700--Sobic001G332000 Sobic005G040700--Sobic010G051000 Sobic005G040700--Sobic001G130500 Sobic001G329200 Sobic001G329200 Sobic005G040700--Sobic001G329200 Sobic001G269100 Sobic001G269100 Sobic005G040700--Sobic001G269100 Sobic005G040700--Sobic007G222100 Sobic001G287400 Sobic001G287400 Sobic005G040700--Sobic001G287400 Sobic005G040700--Sobic001G306500 Sobic009G203900--Sobic007G222100 Sobic002G053800 Sobic002G053800 Sobic009G203900--Sobic002G053800 Sobic009G203900--Sobic001G024900 Sobic009G203900--Sobic010G051000 Sobic003G175600 Sobic003G175600 Sobic009G203900--Sobic003G175600 Sobic004G293300 Sobic004G293300 Sobic009G203900--Sobic004G293300 Sobic009G203900--Sobic001G306500 Sobic009G203900--Sobic001G269800 Sobic010G091800 Sobic010G091800 Sobic009G203900--Sobic010G091800 Sobic003G175950--Sobic001G329200 Sobic003G175950--Sobic001G130500 Sobic003G175950--Sobic001G332000 Sobic003G175950--Sobic005G040700 Sobic001G171300 Sobic001G171300 Sobic003G175950--Sobic001G171300 Sobic003G175950--Sobic001G287400 Sobic003G175950--Sobic001G269100 Sobic003G175950--Sobic010G051000 Sobic001G165700 Sobic001G165700 Sobic003G175950--Sobic001G165700 Sobic001G130500--Sobic003G175950 Sobic001G130500--Sobic001G329200 Sobic001G130500--Sobic001G332000 Sobic001G130500--Sobic005G040700 Sobic001G130500--Sobic001G171300 Sobic001G130500--Sobic001G287400 Sobic001G130500--Sobic010G051000 Sobic001G130500--Sobic001G269100 Sobic001G130500--Sobic001G165700 Sobic004G100900--Sobic001G024900 Sobic004G100900--Sobic007G222100 Sobic004G100900--Sobic001G306500 Sobic004G100900--Sobic001G288400 Sobic004G100900--Sobic010G051000 Sobic004G100900--Sobic001G269800 Sobic004G100900--Sobic009G203900 Sobic004G100900--Sobic001G306400 Sobic004G100900--Sobic001G093100
Octagon: transcription factors


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