Gene annotation
Transcriptome id Sobic.001G306500.3,Sobic.001G306500.2,Sobic.001G306500.1
Synonym EXPB2, ATEXPB2, ATHEXPBETA1.4, Sb01g029880
Functional annotation expansin precursor, putative, expressed
UniProt A0A1B6QM21 , A0A1B6QM36 , A0A1B6QM28
Pfam PF03330 PF01357
Panther DB PTHR31692 PTHR31692:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65680 : expansin B2
RAP-DB (Rice) LOC_Os10g40090.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a051976 , Zm00025a003327 , Zm00025a052019 , Zm00025a052026 , Zm00025a052035 , Zm00025a052033 , Zm00025a003251
Brachypodium KQK07389 , KQJ97768 , KQJ97718
Barley HORVU1Hr1G053300.1 , HORVU1Hr1G053300.2
Wheat TraesCS1D02G215500 , TraesCS1D02G215500 , TraesCS1B02G226100 , TraesCS1B02G226100 , TraesCS1A02G212300 , TraesCS1A02G212600
Populus -


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cDNA sequences
Sobic.001G306500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G024900 expressed protein -
2 Sobic.007G222100 - -
3 Sobic.001G288400 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
4 Sobic.010G051000 "domain confirmed by Pfam database, expressed in flower, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
5 Sobic.001G093100 anthocyanin 3-O-beta-glucosyltransferase, putative, expressed -
6 Sobic.009G203900 profilin domain containing protein, expressed K05759: profilin
7 Sobic.004G100900 tetratricopeptide repeat domain containing protein, expressed -
8 Sobic.001G306400 expansin precursor, putative, expressed -
9 Sobic.005G040700 amino acid permease family protein, putative, expressed -
10 Sobic.006G159000 OsPLIM2b - LIM domain protein, putative actin-binding protein and transcription factor, expressed -
11 Sobic.001G269800 - -
12 Sobic.001G130500 - -
13 Sobic.010G144700 plant protein of unknown function domain containing protein, expressed -
14 Sobic.009G082900 POEI21 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
15 Sobic.003G175950 - -
16 Sobic.002G053800 glycosyl hydrolase family 10 protein, putative, expressed -
17 Sobic.001G412900 - -
18 Sobic.001G269100 lysosomal alpha-mannosidase precursor, putative, expressed -
19 Sobic.005G025600 plant invertase/pectin methylesterase inhibitor domain containing protein, expressed -
20 Sobic.004G293300 zinc-binding protein, putative, expressed -


Gene co-expression network
sample Sobic001G306500 Sobic001G306500 Sobic001G024900 Sobic001G024900 Sobic001G306500--Sobic001G024900 Sobic007G222100 Sobic007G222100 Sobic001G306500--Sobic007G222100 Sobic001G288400 Sobic001G288400 Sobic001G306500--Sobic001G288400 Sobic010G051000 Sobic010G051000 Sobic001G306500--Sobic010G051000 Sobic001G093100 Sobic001G093100 Sobic001G306500--Sobic001G093100 Sobic009G203900 Sobic009G203900 Sobic001G306500--Sobic009G203900 Sobic004G100900 Sobic004G100900 Sobic001G306500--Sobic004G100900 Sobic001G306400 Sobic001G306400 Sobic001G306500--Sobic001G306400 Sobic005G040700 Sobic005G040700 Sobic001G306500--Sobic005G040700 Sobic001G024900--Sobic001G306500 Sobic001G024900--Sobic007G222100 Sobic001G024900--Sobic001G288400 Sobic001G024900--Sobic010G051000 Sobic001G024900--Sobic009G203900 Sobic001G024900--Sobic004G100900 Sobic001G024900--Sobic001G306400 Sobic001G024900--Sobic001G093100 Sobic001G269800 Sobic001G269800 Sobic001G024900--Sobic001G269800 Sobic007G222100--Sobic001G024900 Sobic007G222100--Sobic010G051000 Sobic007G222100--Sobic001G306500 Sobic007G222100--Sobic009G203900 Sobic007G222100--Sobic001G288400 Sobic007G222100--Sobic004G100900 Sobic007G222100--Sobic001G269800 Sobic007G222100--Sobic005G040700 Sobic007G222100--Sobic001G306400 Sobic001G288400--Sobic001G306500 Sobic001G288400--Sobic001G024900 Sobic001G288400--Sobic007G222100 Sobic001G288400--Sobic010G051000 Sobic001G288400--Sobic001G093100 Sobic006G159000 Sobic006G159000 Sobic001G288400--Sobic006G159000 Sobic001G288400--Sobic004G100900 Sobic009G082900 Sobic009G082900 Sobic001G288400--Sobic009G082900 Sobic010G144700 Sobic010G144700 Sobic001G288400--Sobic010G144700 Sobic010G051000--Sobic007G222100 Sobic010G051000--Sobic001G306500 Sobic010G051000--Sobic001G024900 Sobic010G051000--Sobic001G288400 Sobic010G051000--Sobic005G040700 Sobic010G051000--Sobic009G203900 Sobic003G175950 Sobic003G175950 Sobic010G051000--Sobic003G175950 Sobic001G130500 Sobic001G130500 Sobic010G051000--Sobic001G130500 Sobic010G051000--Sobic004G100900 Sobic001G093100--Sobic001G288400 Sobic001G093100--Sobic001G306500 Sobic001G093100--Sobic001G024900 Sobic001G093100--Sobic006G159000 Sobic001G093100--Sobic007G222100 Sobic001G093100--Sobic010G051000 Sobic001G093100--Sobic001G306400 Sobic001G093100--Sobic009G082900 Sobic005G025600 Sobic005G025600 Sobic001G093100--Sobic005G025600 Sobic009G203900--Sobic007G222100 Sobic002G053800 Sobic002G053800 Sobic009G203900--Sobic002G053800 Sobic009G203900--Sobic001G024900 Sobic009G203900--Sobic010G051000 Sobic003G175600 Sobic003G175600 Sobic009G203900--Sobic003G175600 Sobic004G293300 Sobic004G293300 Sobic009G203900--Sobic004G293300 Sobic009G203900--Sobic001G306500 Sobic009G203900--Sobic001G269800 Sobic010G091800 Sobic010G091800 Sobic009G203900--Sobic010G091800 Sobic004G100900--Sobic001G024900 Sobic004G100900--Sobic007G222100 Sobic004G100900--Sobic001G306500 Sobic004G100900--Sobic001G288400 Sobic004G100900--Sobic010G051000 Sobic004G100900--Sobic001G269800 Sobic004G100900--Sobic009G203900 Sobic004G100900--Sobic001G306400 Sobic004G100900--Sobic001G093100 Sobic005G142400 Sobic005G142400 Sobic001G306400--Sobic005G142400 Sobic008G154300 Sobic008G154300 Sobic001G306400--Sobic008G154300 Sobic001G306400--Sobic006G159000 Sobic001G306400--Sobic001G269800 Sobic008G017500 Sobic008G017500 Sobic001G306400--Sobic008G017500 Sobic001G306400--Sobic001G024900 Sobic001G306400--Sobic002G053800 Sobic001G306400--Sobic010G091800 Sobic001G306400--Sobic001G306500 Sobic005G040700--Sobic003G175950 Sobic001G332000 Sobic001G332000 Sobic005G040700--Sobic001G332000 Sobic005G040700--Sobic010G051000 Sobic005G040700--Sobic001G130500 Sobic001G329200 Sobic001G329200 Sobic005G040700--Sobic001G329200 Sobic001G269100 Sobic001G269100 Sobic005G040700--Sobic001G269100 Sobic005G040700--Sobic007G222100 Sobic001G287400 Sobic001G287400 Sobic005G040700--Sobic001G287400 Sobic005G040700--Sobic001G306500
Octagon: transcription factors


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