Gene annotation
Transcriptome id Sobic.008G024200.1
Synonym MRPL11, Sb08g002090
Functional annotation L11 domain containing ribosomal protein, putative, expressed
UniProt A0A1Z5R5D4
Pfam PF03946 PF00298
Panther DB PTHR11661 PTHR11661:SF1
NCBI CDD KOG3257; Mitochondrial/chloroplast ribosomal protein L11
KEGG Orthology K02867; RP-L11, MRPL11, large subunit ribosomal protein L11
Gene Ontology GO:0006412; translation GO:0005840ribosome GO:0003735structural constituent of ribosome


Orthologs (automatic annotation)
TAIR AT4G35490 : mitochondrial ribosomal protein L11
RAP-DB (Rice) LOC_Os10g32870.1 : L11 domain containing ribosomal protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G047100 GEX1, putative, expressed -
2 Sobic.009G234900 WRKY43, expressed -
3 Sobic.010G121700 plastocyanin-like domain containing protein, putative, expressed -
4 Sobic.005G189100 transcription factor Dp, putative, expressed -
5 Sobic.002G006200 - -
6 Sobic.001G089300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
7 Sobic.001G143700 cupin domain containing protein, expressed -
8 Sobic.001G167300 - -
9 Sobic.008G138400 expressed protein -
10 Sobic.007G122600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
11 Sobic.005G148000 - -
12 Sobic.002G097300 OsFBLD5 - F-box, LRR and FBD domain containing protein, expressed -
13 Sobic.002G156400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@MDR-like ABC transporter, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
14 Sobic.003G004000 - -
15 Sobic.005G040100 expressed protein -
16 Sobic.005G006100 hypothetical protein -
17 Sobic.005G140900 OsFBX230 - F-box domain containing protein, expressed -
18 Sobic.003G245300 3-5 exonuclease domain-containing protein, putative, expressed -
19 Sobic.001G192300 expressed protein -
20 Sobic.005G156300 - -


Gene co-expression network
sample Sobic008G024200 Sobic008G024200 Sobic009G047100 Sobic009G047100 Sobic008G024200--Sobic009G047100 Sobic009G234900 Sobic009G234900 Sobic008G024200--Sobic009G234900 Sobic010G121700 Sobic010G121700 Sobic008G024200--Sobic010G121700 Sobic005G189100 Sobic005G189100 Sobic008G024200--Sobic005G189100 Sobic002G006200 Sobic002G006200 Sobic008G024200--Sobic002G006200 Sobic001G089300 Sobic001G089300 Sobic008G024200--Sobic001G089300 Sobic001G143700 Sobic001G143700 Sobic008G024200--Sobic001G143700 Sobic001G167300 Sobic001G167300 Sobic008G024200--Sobic001G167300 Sobic008G138400 Sobic008G138400 Sobic008G024200--Sobic008G138400 Sobic009G047100--Sobic008G024200 Sobic009G047100--Sobic002G006200 Sobic009G047100--Sobic009G234900 Sobic009G047100--Sobic005G189100 Sobic009G047100--Sobic001G089300 Sobic009G047100--Sobic010G121700 Sobic009G047100--Sobic008G138400 Sobic002G097300 Sobic002G097300 Sobic009G047100--Sobic002G097300 Sobic009G047100--Sobic001G143700 Sobic009G234900--Sobic005G189100 Sobic009G234900--Sobic010G121700 Sobic009G234900--Sobic001G089300 Sobic009G234900--Sobic008G024200 Sobic009G234900--Sobic002G006200 Sobic009G234900--Sobic009G047100 Sobic009G234900--Sobic008G138400 Sobic002G156400 Sobic002G156400 Sobic009G234900--Sobic002G156400 Sobic009G234900--Sobic001G143700 Sobic010G121700--Sobic009G234900 Sobic010G121700--Sobic005G189100 Sobic010G121700--Sobic008G024200 Sobic010G121700--Sobic001G089300 Sobic010G121700--Sobic009G047100 Sobic010G121700--Sobic002G006200 Sobic010G121700--Sobic002G156400 Sobic010G121700--Sobic008G138400 Sobic010G121700--Sobic002G097300 Sobic005G189100--Sobic002G006200 Sobic005G189100--Sobic001G089300 Sobic005G189100--Sobic009G234900 Sobic005G189100--Sobic008G138400 Sobic005G189100--Sobic001G143700 Sobic005G189100--Sobic002G097300 Sobic005G189100--Sobic010G121700 Sobic005G189100--Sobic008G024200 Sobic005G189100--Sobic002G156400 Sobic002G006200--Sobic005G189100 Sobic002G006200--Sobic001G143700 Sobic002G006200--Sobic002G097300 Sobic002G006200--Sobic008G138400 Sobic002G006200--Sobic001G089300 Sobic005G148000 Sobic005G148000 Sobic002G006200--Sobic005G148000 Sobic002G006200--Sobic009G234900 Sobic002G006200--Sobic008G024200 Sobic002G006200--Sobic009G047100 Sobic001G089300--Sobic005G189100 Sobic001G089300--Sobic009G234900 Sobic001G089300--Sobic002G006200 Sobic001G089300--Sobic008G138400 Sobic001G089300--Sobic010G121700 Sobic001G089300--Sobic002G097300 Sobic001G089300--Sobic002G156400 Sobic001G089300--Sobic008G024200 Sobic001G089300--Sobic001G143700 Sobic001G143700--Sobic005G148000 Sobic001G143700--Sobic002G006200 Sobic001G143700--Sobic005G189100 Sobic001G143700--Sobic002G097300 Sobic005G040100 Sobic005G040100 Sobic001G143700--Sobic005G040100 Sobic001G143700--Sobic008G138400 Sobic001G143700--Sobic001G089300 Sobic001G143700--Sobic009G234900 Sobic007G122600 Sobic007G122600 Sobic001G143700--Sobic007G122600 Sobic003G004000 Sobic003G004000 Sobic001G167300--Sobic003G004000 Sobic005G006100 Sobic005G006100 Sobic001G167300--Sobic005G006100 Sobic010G207800 Sobic010G207800 Sobic001G167300--Sobic010G207800 Sobic001G167300--Sobic007G122600 Sobic001G167300--Sobic008G024200 Sobic004G192600 Sobic004G192600 Sobic001G167300--Sobic004G192600 Sobic001G089400 Sobic001G089400 Sobic001G167300--Sobic001G089400 Sobic001G167300--Sobic009G234900 Sobic001G167300--Sobic005G189100 Sobic008G138400--Sobic002G097300 Sobic008G138400--Sobic002G156400 Sobic005G140900 Sobic005G140900 Sobic008G138400--Sobic005G140900 Sobic008G138400--Sobic005G189100 Sobic008G138400--Sobic002G006200 Sobic008G138400--Sobic001G089300 Sobic008G138400--Sobic001G143700 Sobic008G138400--Sobic009G234900 Sobic008G138400--Sobic005G148000
Octagon: transcription factors


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