Gene annotation
Transcriptome id Sobic.005G189100.1
Synonym DPB, ATDPB, Sb05g024630
Functional annotation transcription factor Dp, putative, expressed
UniProt C5Y6G1
Pfam PF02319 PF08781
Panther DB PTHR12548 PTHR12548:SF15
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005667transcription regulator complex GO:0003700DNA-binding transcription factor activity GO:0007049cell cycle


Orthologs (automatic annotation)
TAIR AT5G03415 : Transcription factor DP
RAP-DB (Rice) LOC_Os03g05760.1 : transcription factor Dp, putative, expressed
MaizeGDB (Corn) Zm00025a017732
Brachypodium -
Barley -
Wheat TraesCS4B02G268800 , TraesCS4D02G268100 , TraesCS4D02G268100 , TraesCS4A02G036000
Populus PNS98738 , PNS98739 , PNT31250


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G006200 - -
2 Sobic.001G089300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
3 Sobic.009G234900 WRKY43, expressed -
4 Sobic.008G138400 expressed protein -
5 Sobic.001G143700 cupin domain containing protein, expressed -
6 Sobic.002G097300 OsFBLD5 - F-box, LRR and FBD domain containing protein, expressed -
7 Sobic.010G121700 plastocyanin-like domain containing protein, putative, expressed -
8 Sobic.008G024200 L11 domain containing ribosomal protein, putative, expressed K02867: RP-L11, MRPL11, large subunit ribosomal protein L11
9 Sobic.002G156400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@MDR-like ABC transporter, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
10 Sobic.005G148000 - -
11 Sobic.009G047100 GEX1, putative, expressed -
12 Sobic.005G140900 OsFBX230 - F-box domain containing protein, expressed -
13 Sobic.005G040100 expressed protein -
14 Sobic.008G036100 expressed protein -
15 Sobic.007G122600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
16 Sobic.005G156300 - -
17 Sobic.001G167300 - -
18 Sobic.005G006100 hypothetical protein -
19 Sobic.006G042600 - -
20 Sobic.007G134501 - -


Gene co-expression network
sample Sobic005G189100 Sobic005G189100 Sobic002G006200 Sobic002G006200 Sobic005G189100--Sobic002G006200 Sobic001G089300 Sobic001G089300 Sobic005G189100--Sobic001G089300 Sobic009G234900 Sobic009G234900 Sobic005G189100--Sobic009G234900 Sobic008G138400 Sobic008G138400 Sobic005G189100--Sobic008G138400 Sobic001G143700 Sobic001G143700 Sobic005G189100--Sobic001G143700 Sobic002G097300 Sobic002G097300 Sobic005G189100--Sobic002G097300 Sobic010G121700 Sobic010G121700 Sobic005G189100--Sobic010G121700 Sobic008G024200 Sobic008G024200 Sobic005G189100--Sobic008G024200 Sobic002G156400 Sobic002G156400 Sobic005G189100--Sobic002G156400 Sobic002G006200--Sobic005G189100 Sobic002G006200--Sobic001G143700 Sobic002G006200--Sobic002G097300 Sobic002G006200--Sobic008G138400 Sobic002G006200--Sobic001G089300 Sobic005G148000 Sobic005G148000 Sobic002G006200--Sobic005G148000 Sobic002G006200--Sobic009G234900 Sobic002G006200--Sobic008G024200 Sobic009G047100 Sobic009G047100 Sobic002G006200--Sobic009G047100 Sobic001G089300--Sobic005G189100 Sobic001G089300--Sobic009G234900 Sobic001G089300--Sobic002G006200 Sobic001G089300--Sobic008G138400 Sobic001G089300--Sobic010G121700 Sobic001G089300--Sobic002G097300 Sobic001G089300--Sobic002G156400 Sobic001G089300--Sobic008G024200 Sobic001G089300--Sobic001G143700 Sobic009G234900--Sobic005G189100 Sobic009G234900--Sobic010G121700 Sobic009G234900--Sobic001G089300 Sobic009G234900--Sobic008G024200 Sobic009G234900--Sobic002G006200 Sobic009G234900--Sobic009G047100 Sobic009G234900--Sobic008G138400 Sobic009G234900--Sobic002G156400 Sobic009G234900--Sobic001G143700 Sobic008G138400--Sobic002G097300 Sobic008G138400--Sobic002G156400 Sobic005G140900 Sobic005G140900 Sobic008G138400--Sobic005G140900 Sobic008G138400--Sobic005G189100 Sobic008G138400--Sobic002G006200 Sobic008G138400--Sobic001G089300 Sobic008G138400--Sobic001G143700 Sobic008G138400--Sobic009G234900 Sobic008G138400--Sobic005G148000 Sobic001G143700--Sobic005G148000 Sobic001G143700--Sobic002G006200 Sobic001G143700--Sobic005G189100 Sobic001G143700--Sobic002G097300 Sobic005G040100 Sobic005G040100 Sobic001G143700--Sobic005G040100 Sobic001G143700--Sobic008G138400 Sobic001G143700--Sobic001G089300 Sobic001G143700--Sobic009G234900 Sobic007G122600 Sobic007G122600 Sobic001G143700--Sobic007G122600 Sobic002G097300--Sobic008G138400 Sobic002G097300--Sobic002G006200 Sobic002G097300--Sobic001G143700 Sobic002G097300--Sobic005G140900 Sobic002G097300--Sobic005G189100 Sobic002G097300--Sobic002G156400 Sobic002G097300--Sobic005G148000 Sobic002G097300--Sobic001G089300 Sobic008G036100 Sobic008G036100 Sobic002G097300--Sobic008G036100 Sobic010G121700--Sobic009G234900 Sobic010G121700--Sobic005G189100 Sobic010G121700--Sobic008G024200 Sobic010G121700--Sobic001G089300 Sobic010G121700--Sobic009G047100 Sobic010G121700--Sobic002G006200 Sobic010G121700--Sobic002G156400 Sobic010G121700--Sobic008G138400 Sobic010G121700--Sobic002G097300 Sobic008G024200--Sobic009G047100 Sobic008G024200--Sobic009G234900 Sobic008G024200--Sobic010G121700 Sobic008G024200--Sobic005G189100 Sobic008G024200--Sobic002G006200 Sobic008G024200--Sobic001G089300 Sobic008G024200--Sobic001G143700 Sobic001G167300 Sobic001G167300 Sobic008G024200--Sobic001G167300 Sobic008G024200--Sobic008G138400 Sobic002G156400--Sobic008G138400 Sobic002G156400--Sobic005G140900 Sobic002G156400--Sobic002G097300 Sobic002G156400--Sobic005G189100 Sobic002G156400--Sobic001G089300 Sobic002G156400--Sobic009G234900 Sobic002G156400--Sobic002G006200 Sobic002G156400--Sobic010G121700 Sobic002G156400--Sobic008G036100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.