Gene annotation
Transcriptome id Sobic.007G122600.1
Synonym LBD22, lateral organ boundaries, Sb07g019940, SbLBD23
Functional annotation "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment" (PubMedID : 20499123)
DUF260 domain containing protein, putative, expressed
UniProt C5YKR7
Pfam PF03195
Panther DB PTHR31301 PTHR31301:SF27
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G13850 : LOB domain-containing protein 22
RAP-DB (Rice) LOC_Os08g31080.1 : DUF260 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a030996 , Zm00025a029422 , Zm00025a006055
Brachypodium KQJ98172
Barley HORVU3Hr1G109250.1 , HORVU5Hr1G057690.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G006100 hypothetical protein -
2 Sobic.002G194201 - -
3 Sobic.007G134501 - -
4 Sobic.005G040100 expressed protein -
5 Sobic.003G007650 - -
6 Sobic.003G245300 3-5 exonuclease domain-containing protein, putative, expressed -
7 Sobic.005G006400 DEFL55 - Defensin and Defensin-like DEFL family, expressed -
8 Sobic.010G240300 Os12bglu38 - beta-glucosidase/beta-mannosidase/exoglucanase homologue, expressed K05350: beta-glucosidase
9 Sobic.007G035200 - -
10 Sobic.005G148000 - -
11 Sobic.008G086500 - -
12 Sobic.001G143700 cupin domain containing protein, expressed -
13 Sobic.001G192300 expressed protein -
14 Sobic.001G167300 - -
15 Sobic.002G006200 - -
16 Sobic.007G014000 OsFBX142 - F-box domain containing protein, expressed -
17 Sobic.010G216100 leaf senescence related protein, putative, expressed -
18 Sobic.010G207800 E1-E2 ATPase domain containing protein, expressed K01535: PMA1, H+-transporting ATPase
19 Sobic.006G042600 - -
20 Sobic.008G024200 L11 domain containing ribosomal protein, putative, expressed K02867: RP-L11, MRPL11, large subunit ribosomal protein L11


Gene co-expression network
sample Sobic007G122600 Sobic007G122600 Sobic005G006100 Sobic005G006100 Sobic007G122600--Sobic005G006100 Sobic002G194201 Sobic002G194201 Sobic007G122600--Sobic002G194201 Sobic007G134501 Sobic007G134501 Sobic007G122600--Sobic007G134501 Sobic005G040100 Sobic005G040100 Sobic007G122600--Sobic005G040100 Sobic003G007650 Sobic003G007650 Sobic007G122600--Sobic003G007650 Sobic003G245300 Sobic003G245300 Sobic007G122600--Sobic003G245300 Sobic005G006400 Sobic005G006400 Sobic007G122600--Sobic005G006400 Sobic010G240300 Sobic010G240300 Sobic007G122600--Sobic010G240300 Sobic007G035200 Sobic007G035200 Sobic007G122600--Sobic007G035200 Sobic005G006100--Sobic007G122600 Sobic005G006100--Sobic007G134501 Sobic005G006100--Sobic002G194201 Sobic005G006100--Sobic003G007650 Sobic005G006100--Sobic010G240300 Sobic005G006100--Sobic005G006400 Sobic005G006100--Sobic007G035200 Sobic005G006100--Sobic005G040100 Sobic010G207800 Sobic010G207800 Sobic005G006100--Sobic010G207800 Sobic002G194201--Sobic007G134501 Sobic002G194201--Sobic003G007650 Sobic002G194201--Sobic005G006400 Sobic002G194201--Sobic007G035200 Sobic002G194201--Sobic007G122600 Sobic002G194201--Sobic005G040100 Sobic008G086500 Sobic008G086500 Sobic002G194201--Sobic008G086500 Sobic002G194201--Sobic005G006100 Sobic002G194201--Sobic010G240300 Sobic007G134501--Sobic003G007650 Sobic007G134501--Sobic002G194201 Sobic007G134501--Sobic005G040100 Sobic007G134501--Sobic007G035200 Sobic007G134501--Sobic005G006400 Sobic007G134501--Sobic007G122600 Sobic007G134501--Sobic005G006100 Sobic007G134501--Sobic008G086500 Sobic007G134501--Sobic010G240300 Sobic005G148000 Sobic005G148000 Sobic005G040100--Sobic005G148000 Sobic005G040100--Sobic007G134501 Sobic005G040100--Sobic002G194201 Sobic005G040100--Sobic007G122600 Sobic001G143700 Sobic001G143700 Sobic005G040100--Sobic001G143700 Sobic005G040100--Sobic003G007650 Sobic005G040100--Sobic005G006100 Sobic002G006200 Sobic002G006200 Sobic005G040100--Sobic002G006200 Sobic005G040100--Sobic003G245300 Sobic003G007650--Sobic007G035200 Sobic003G007650--Sobic007G134501 Sobic003G007650--Sobic005G006400 Sobic003G007650--Sobic002G194201 Sobic003G007650--Sobic008G086500 Sobic003G007650--Sobic010G240300 Sobic003G007650--Sobic005G006100 Sobic003G007650--Sobic005G040100 Sobic003G007650--Sobic007G122600 Sobic003G245300--Sobic007G122600 Sobic003G245300--Sobic002G194201 Sobic003G245300--Sobic007G134501 Sobic003G245300--Sobic005G040100 Sobic003G245300--Sobic003G007650 Sobic003G245300--Sobic005G006100 Sobic003G245300--Sobic007G035200 Sobic003G245300--Sobic005G006400 Sobic003G245300--Sobic008G086500 Sobic005G006400--Sobic007G035200 Sobic005G006400--Sobic003G007650 Sobic005G006400--Sobic010G240300 Sobic005G006400--Sobic008G086500 Sobic005G006400--Sobic002G194201 Sobic005G006400--Sobic007G134501 Sobic005G006400--Sobic005G006100 Sobic007G014000 Sobic007G014000 Sobic005G006400--Sobic007G014000 Sobic010G216100 Sobic010G216100 Sobic005G006400--Sobic010G216100 Sobic010G240300--Sobic005G006400 Sobic010G240300--Sobic007G014000 Sobic010G240300--Sobic008G086500 Sobic010G240300--Sobic010G216100 Sobic010G240300--Sobic007G035200 Sobic010G090200 Sobic010G090200 Sobic010G240300--Sobic010G090200 Sobic010G240300--Sobic003G007650 Sobic010G240300--Sobic005G006100 Sobic010G240300--Sobic002G194201 Sobic007G035200--Sobic005G006400 Sobic007G035200--Sobic003G007650 Sobic007G035200--Sobic008G086500 Sobic007G035200--Sobic010G240300 Sobic007G035200--Sobic007G134501 Sobic007G035200--Sobic002G194201 Sobic007G035200--Sobic005G006100 Sobic007G035200--Sobic007G014000 Sobic007G035200--Sobic010G216100
Octagon: transcription factors


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