Gene annotation
Transcriptome id Sobic.001G525600.1
Synonym Sb01g048930
Functional annotation fringe-related protein, putative, expressed
UniProt C5X027
Pfam PF02434
Panther DB PTHR10811 PTHR10811:SF21
NCBI CDD KOG2246; Galactosyltransferases
KEGG Orthology -
Gene Ontology GO:0016757; transferase activity, transferring glycosyl groups GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT4G23490 : Protein of unknown function (DUF604)
RAP-DB (Rice) LOC_Os03g03270.1 : fringe-related protein, putative, expressed
MaizeGDB (Corn) Zm00025a056731 , Zm00025a003144 , Zm00025a001793 , Zm00025a010091
Brachypodium KQK22378 , PNT78287 , KQJ97584
Barley HORVU4Hr1G084520.5 , HORVU4Hr1G084520.4 , HORVU4Hr1G084520.7 , HORVU4Hr1G084520.6 , HORVU4Hr1G084520.1 , HORVU4Hr1G084520.3 , HORVU4Hr1G084520.2 , HORVU1Hr1G049710.2 , HORVU1Hr1G049710.3 , HORVU1Hr1G049710.4
Wheat TraesCS4D02G340600 , TraesCS5A02G514600 , TraesCS2B02G414100 , TraesCS1D02G193700 , TraesCS4D02G210600 , TraesCS4B02G345500 , TraesCS4A02G094600 , TraesCS1B02G205200 , TraesCS1A02G183500 , TraesCS2D02G393500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G099200 kinesin motor domain containing protein, expressed K10406: kinesin family member C2/C3
2 Sobic.001G135950 - -
3 Sobic.005G145400 RNA recognition motif containing protein, putative, expressed -
4 Sobic.003G313200 expressed protein -
5 Sobic.003G420500 Ca ATPase 3(PubMedID : 22196357)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
6 Sobic.004G071900 expressed protein -
7 Sobic.002G279900 beta-galactosidase precursor, putative, expressed -
8 Sobic.002G125100 - -
9 Sobic.006G215500 OsFBX114 - F-box domain containing protein, expressed -
10 Sobic.001G529800 phospholipase D, putative, expressed K01115: phospholipase D1/2
11 Sobic.010G001200 CCT/B-box zinc finger protein, putative, expressed -
12 Sobic.001G092500 protein kinase domain containing protein, expressed -
13 Sobic.010G276100 transporter family protein, putative, expressed -
14 Sobic.005G037700 OsFBX378 - F-box domain containing protein, expressed -
15 Sobic.002G384500 expressed protein -
16 Sobic.008G043200 - -
17 Sobic.009G105100 expressed protein -
18 Sobic.009G175400 vacuolar ATP synthase subunit E, putative, expressed K02150: ATPeV1E, V-type H+-transporting ATPase subunit E
19 Sobic.006G259100 EH domain-containing protein 1, putative, expressed K12483: EH domain-containing protein 1
20 Sobic.006G022700 OsFBD9 - F-box and FBD domain containing protein, expressed -


Gene co-expression network
sample Sobic001G525600 Sobic001G525600 Sobic004G099200 Sobic004G099200 Sobic001G525600--Sobic004G099200 Sobic001G135950 Sobic001G135950 Sobic001G525600--Sobic001G135950 Sobic005G145400 Sobic005G145400 Sobic001G525600--Sobic005G145400 Sobic003G313200 Sobic003G313200 Sobic001G525600--Sobic003G313200 Sobic003G420500 Sobic003G420500 Sobic001G525600--Sobic003G420500 Sobic004G071900 Sobic004G071900 Sobic001G525600--Sobic004G071900 Sobic002G279900 Sobic002G279900 Sobic001G525600--Sobic002G279900 Sobic002G125100 Sobic002G125100 Sobic001G525600--Sobic002G125100 Sobic006G215500 Sobic006G215500 Sobic001G525600--Sobic006G215500 Sobic004G099200--Sobic001G135950 Sobic004G099200--Sobic001G525600 Sobic004G099200--Sobic004G071900 Sobic004G099200--Sobic005G145400 Sobic004G099200--Sobic002G125100 Sobic004G099200--Sobic006G215500 Sobic004G099200--Sobic003G313200 Sobic010G276100 Sobic010G276100 Sobic004G099200--Sobic010G276100 Sobic004G099200--Sobic002G279900 Sobic001G135950--Sobic004G071900 Sobic001G135950--Sobic002G125100 Sobic001G135950--Sobic006G215500 Sobic001G135950--Sobic004G099200 Sobic001G135950--Sobic002G279900 Sobic010G001200 Sobic010G001200 Sobic001G135950--Sobic010G001200 Sobic001G135950--Sobic001G525600 Sobic001G135950--Sobic005G145400 Sobic001G135950--Sobic003G313200 Sobic005G145400--Sobic003G420500 Sobic008G043200 Sobic008G043200 Sobic005G145400--Sobic008G043200 Sobic009G175400 Sobic009G175400 Sobic005G145400--Sobic009G175400 Sobic005G145400--Sobic010G276100 Sobic005G145400--Sobic004G099200 Sobic005G145400--Sobic001G135950 Sobic005G037700 Sobic005G037700 Sobic005G145400--Sobic005G037700 Sobic010G040400 Sobic010G040400 Sobic005G145400--Sobic010G040400 Sobic005G145400--Sobic001G525600 Sobic003G313200--Sobic006G215500 Sobic003G313200--Sobic004G071900 Sobic003G313200--Sobic004G099200 Sobic003G313200--Sobic001G135950 Sobic003G313200--Sobic001G525600 Sobic006G022700 Sobic006G022700 Sobic003G313200--Sobic006G022700 Sobic003G313200--Sobic002G279900 Sobic003G313200--Sobic002G125100 Sobic009G105100 Sobic009G105100 Sobic003G313200--Sobic009G105100 Sobic003G420500--Sobic005G145400 Sobic003G420500--Sobic005G037700 Sobic003G420500--Sobic008G043200 Sobic003G420500--Sobic001G525600 Sobic001G089400 Sobic001G089400 Sobic003G420500--Sobic001G089400 Sobic004G192600 Sobic004G192600 Sobic003G420500--Sobic004G192600 Sobic003G420500--Sobic004G099200 Sobic010G016200 Sobic010G016200 Sobic003G420500--Sobic010G016200 Sobic007G197000 Sobic007G197000 Sobic003G420500--Sobic007G197000 Sobic004G071900--Sobic006G215500 Sobic004G071900--Sobic001G135950 Sobic004G071900--Sobic002G125100 Sobic004G071900--Sobic004G099200 Sobic004G071900--Sobic009G105100 Sobic009G102700 Sobic009G102700 Sobic004G071900--Sobic009G102700 Sobic004G071900--Sobic003G313200 Sobic004G071900--Sobic006G022700 Sobic004G071900--Sobic002G279900 Sobic002G279900--Sobic001G135950 Sobic002G279900--Sobic002G125100 Sobic002G279900--Sobic004G071900 Sobic002G279900--Sobic006G215500 Sobic002G279900--Sobic010G001200 Sobic002G279900--Sobic004G099200 Sobic002G279900--Sobic001G525600 Sobic002G279900--Sobic003G313200 Sobic002G279900--Sobic006G022700 Sobic002G125100--Sobic001G135950 Sobic002G125100--Sobic004G071900 Sobic002G125100--Sobic006G215500 Sobic002G125100--Sobic004G099200 Sobic002G125100--Sobic002G279900 Sobic002G125100--Sobic009G105100 Sobic002G125100--Sobic010G001200 Sobic002G125100--Sobic001G525600 Sobic002G125100--Sobic003G313200 Sobic006G215500--Sobic004G071900 Sobic006G215500--Sobic001G135950 Sobic006G215500--Sobic006G022700 Sobic006G215500--Sobic002G125100 Sobic006G215500--Sobic003G313200 Sobic001G220800 Sobic001G220800 Sobic006G215500--Sobic001G220800 Sobic004G025500 Sobic004G025500 Sobic006G215500--Sobic004G025500 Sobic006G215500--Sobic009G102700 Sobic006G215500--Sobic004G099200
Octagon: transcription factors


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