Gene annotation
Transcriptome id Sobic.006G022700.1
Synonym
Functional annotation OsFBD9 - F-box and FBD domain containing protein, expressed
UniProt A0A1B6PJL7
Pfam -
Panther DB PTHR32212 PTHR32212:SF76
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G59200 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os04g13160.1 : OsFBD9 - F-box and FBD domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQK07175 , KQK07176 , KQK07177
Barley HORVU7Hr1G090550.2 , HORVU7Hr1G090550.1 , HORVU2Hr1G009570.1
Wheat TraesCS4D02G113200 , TraesCS4A02G199900 , TraesCS2A02G096100 , TraesCS3B02G086300 , TraesCS3B02G086300 , TraesCS4B02G119100 , TraesCS4D02G059800 , TraesCS3D02G071900 , TraesCS4D02G117300 , TraesCS2D02G019000 , TraesCS3A02G072000 , TraesCS6D02G271700 , TraesCS4B02G115500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G215500 OsFBX114 - F-box domain containing protein, expressed -
2 Sobic.001G220800 AGC_AGC_other_NDRh_TRCd.3 - ACG kinases include homologs to PKA, PKG and PKC, expressed K08790: STK38, serine/threonine kinase 38
3 Sobic.004G071900 expressed protein -
4 Sobic.009G098400 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor
5 Sobic.003G313200 expressed protein -
6 Sobic.004G350400 pectinesterase, putative, expressed K01051: pectinesterase
7 Sobic.002G279900 beta-galactosidase precursor, putative, expressed -
8 Sobic.004G187400 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
9 Sobic.001G135950 - -
10 Sobic.002G282600 copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
11 Sobic.002G125100 - -
12 Sobic.004G025500 - -
13 Sobic.002G091300 pectinesterase inhibitor domain containing protein, expressed -
14 Sobic.004G131400 DEF7 - Defensin and Defensin-like DEFL family, expressed -
15 Sobic.005G214700 - -
16 Sobic.010G230200 myb-like DNA-binding domain containing protein, expressed K09422: transcription factor MYB, plant
17 Sobic.009G116100 conserved hypothetical protein -
18 Sobic.010G056500 - -
19 Sobic.004G147700 pectinesterase inhibitor domain containing protein, putative, expressed -
20 Sobic.001G540000 expansin precursor, putative, expressed -


Gene co-expression network
sample Sobic006G022700 Sobic006G022700 Sobic006G215500 Sobic006G215500 Sobic006G022700--Sobic006G215500 Sobic001G220800 Sobic001G220800 Sobic006G022700--Sobic001G220800 Sobic004G071900 Sobic004G071900 Sobic006G022700--Sobic004G071900 Sobic009G098400 Sobic009G098400 Sobic006G022700--Sobic009G098400 Sobic003G313200 Sobic003G313200 Sobic006G022700--Sobic003G313200 Sobic004G350400 Sobic004G350400 Sobic006G022700--Sobic004G350400 Sobic002G279900 Sobic002G279900 Sobic006G022700--Sobic002G279900 Sobic004G187400 Sobic004G187400 Sobic006G022700--Sobic004G187400 Sobic001G135950 Sobic001G135950 Sobic006G022700--Sobic001G135950 Sobic006G215500--Sobic004G071900 Sobic006G215500--Sobic001G135950 Sobic006G215500--Sobic006G022700 Sobic002G125100 Sobic002G125100 Sobic006G215500--Sobic002G125100 Sobic006G215500--Sobic003G313200 Sobic006G215500--Sobic001G220800 Sobic004G025500 Sobic004G025500 Sobic006G215500--Sobic004G025500 Sobic009G102700 Sobic009G102700 Sobic006G215500--Sobic009G102700 Sobic004G099200 Sobic004G099200 Sobic006G215500--Sobic004G099200 Sobic001G220800--Sobic004G350400 Sobic001G540000 Sobic001G540000 Sobic001G220800--Sobic001G540000 Sobic002G282600 Sobic002G282600 Sobic001G220800--Sobic002G282600 Sobic002G091200 Sobic002G091200 Sobic001G220800--Sobic002G091200 Sobic004G131400 Sobic004G131400 Sobic001G220800--Sobic004G131400 Sobic001G220800--Sobic004G025500 Sobic004G025600 Sobic004G025600 Sobic001G220800--Sobic004G025600 Sobic005G010000 Sobic005G010000 Sobic001G220800--Sobic005G010000 Sobic003G173800 Sobic003G173800 Sobic001G220800--Sobic003G173800 Sobic004G071900--Sobic006G215500 Sobic004G071900--Sobic001G135950 Sobic004G071900--Sobic002G125100 Sobic004G071900--Sobic004G099200 Sobic009G105100 Sobic009G105100 Sobic004G071900--Sobic009G105100 Sobic004G071900--Sobic009G102700 Sobic004G071900--Sobic003G313200 Sobic004G071900--Sobic006G022700 Sobic004G071900--Sobic002G279900 Sobic009G098400--Sobic004G187400 Sobic010G271600 Sobic010G271600 Sobic009G098400--Sobic010G271600 Sobic005G214700 Sobic005G214700 Sobic009G098400--Sobic005G214700 Sobic010G190500 Sobic010G190500 Sobic009G098400--Sobic010G190500 Sobic009G098400--Sobic006G022700 Sobic008G102850 Sobic008G102850 Sobic009G098400--Sobic008G102850 Sobic002G304300 Sobic002G304300 Sobic009G098400--Sobic002G304300 Sobic003G009600 Sobic003G009600 Sobic009G098400--Sobic003G009600 Sobic009G098400--Sobic006G215500 Sobic003G313200--Sobic006G215500 Sobic003G313200--Sobic004G071900 Sobic003G313200--Sobic004G099200 Sobic003G313200--Sobic001G135950 Sobic001G525600 Sobic001G525600 Sobic003G313200--Sobic001G525600 Sobic003G313200--Sobic006G022700 Sobic003G313200--Sobic002G279900 Sobic003G313200--Sobic002G125100 Sobic003G313200--Sobic009G105100 Sobic004G350400--Sobic001G540000 Sobic010G056500 Sobic010G056500 Sobic004G350400--Sobic010G056500 Sobic004G350400--Sobic004G131400 Sobic004G350400--Sobic002G091200 Sobic004G350400--Sobic004G025600 Sobic004G350400--Sobic001G220800 Sobic004G350400--Sobic002G282600 Sobic002G106800 Sobic002G106800 Sobic004G350400--Sobic002G106800 Sobic004G350400--Sobic003G173800 Sobic002G279900--Sobic001G135950 Sobic002G279900--Sobic002G125100 Sobic002G279900--Sobic004G071900 Sobic002G279900--Sobic006G215500 Sobic010G001200 Sobic010G001200 Sobic002G279900--Sobic010G001200 Sobic002G279900--Sobic004G099200 Sobic002G279900--Sobic001G525600 Sobic002G279900--Sobic003G313200 Sobic002G279900--Sobic006G022700 Sobic004G187400--Sobic009G098400 Sobic004G187400--Sobic010G271600 Sobic004G187400--Sobic005G214700 Sobic004G187400--Sobic006G022700 Sobic004G187400--Sobic010G190500 Sobic004G187400--Sobic008G102850 Sobic004G187400--Sobic002G304300 Sobic003G405800 Sobic003G405800 Sobic004G187400--Sobic003G405800 Sobic006G173400 Sobic006G173400 Sobic004G187400--Sobic006G173400 Sobic001G135950--Sobic004G071900 Sobic001G135950--Sobic002G125100 Sobic001G135950--Sobic006G215500 Sobic001G135950--Sobic004G099200 Sobic001G135950--Sobic002G279900 Sobic001G135950--Sobic010G001200 Sobic001G135950--Sobic001G525600 Sobic005G145400 Sobic005G145400 Sobic001G135950--Sobic005G145400 Sobic001G135950--Sobic003G313200
Octagon: transcription factors


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