Gene annotation
Transcriptome id Sobic.001G220800.1,Sobic.001G220800.2
Synonym Sb01g019410
Functional annotation AGC_AGC_other_NDRh_TRCd.3 - ACG kinases include homologs to PKA, PKG and PKC, expressed
UniProt A0A1Z5S738 , A0A1B6QKB0
Pfam PF07714 PF00069 PF00433 PF07714
Panther DB PTHR24356 PTHR24356:SF183
NCBI CDD -
KEGG Orthology K08790; STK38, serine/threonine kinase 38
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004674protein serine/threonine kinase activity GO:0004672protein kinase activity GO:0006468protein phosphorylation GO:0004672protein kinase activity GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT2G20470 : AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
RAP-DB (Rice) LOC_Os10g33640.1 : AGC_AGC_other_NDRh_TRCd.3 - ACG kinases include homologs to PKA, PKG and PKC, expressed
MaizeGDB (Corn) Zm00025a006621
Brachypodium KQJ97079
Barley HORVU1Hr1G040850.41 , HORVU1Hr1G040850.40 , HORVU1Hr1G040850.45 , HORVU1Hr1G040850.47 , HORVU1Hr1G040850.46 , HORVU1Hr1G040850.3 , HORVU1Hr1G040850.5 , HORVU1Hr1G040850.6 , HORVU1Hr1G040850.7 , HORVU1Hr1G040850.29 , HORVU1Hr1G040850.28 , HORVU1Hr1G040850.26 , HORVU1Hr1G040850.38 , HORVU1Hr1G040850.39 , HORVU1Hr1G040850.30 , HORVU1Hr1G040850.31 , HORVU1Hr1G040850.33 , HORVU1Hr1G040850.34 , HORVU1Hr1G040850.35 , HORVU1Hr1G040850.36 , HORVU1Hr1G040850.37 , HORVU1Hr1G040850.11 , HORVU1Hr1G040850.14 , HORVU1Hr1G040850.19
Wheat TraesCS3A02G110400 , TraesCS1B02G171500 , TraesCS1D02G151900 , TraesCS1A02G153400 , TraesCS1B02G171500 , TraesCS1B02G171500 , TraesCS3B02G129500 , TraesCS3D02G112400
Populus PNT25094 , PNT25091 , PNT25092 , PNT25093


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G350400 pectinesterase, putative, expressed K01051: pectinesterase
2 Sobic.001G540000 expansin precursor, putative, expressed -
3 Sobic.002G282600 copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
4 Sobic.002G091200 pectinesterase inhibitor domain containing protein, expressed -
5 Sobic.004G131400 DEF7 - Defensin and Defensin-like DEFL family, expressed -
6 Sobic.004G025500 - -
7 Sobic.004G025600 - -
8 Sobic.005G010000 expressed protein -
9 Sobic.003G173800 polygalacturonase, putative, expressed -
10 Sobic.002G106800 expressed protein -
11 Sobic.010G056500 - -
12 Sobic.003G438500 THION25 - Plant thionin family protein precursor, expressed -
13 Sobic.009G098900 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor
14 Sobic.004G137200 fasciclin-like arabinogalactan precursor protein, putative, expressed -
15 Sobic.004G147700 pectinesterase inhibitor domain containing protein, putative, expressed -
16 Sobic.007G100800 CSLD3 - cellulose synthase-like family D, expressed -
17 Sobic.008G186900 SCP-like extracellular protein, expressed -
18 Sobic.002G091300 pectinesterase inhibitor domain containing protein, expressed -
19 Sobic.003G061700 - -
20 Sobic.010G161400 polygalacturonase, putative, expressed K01213: galacturan 1,4-alpha-galacturonidase


Gene co-expression network
sample Sobic001G220800 Sobic001G220800 Sobic004G350400 Sobic004G350400 Sobic001G220800--Sobic004G350400 Sobic001G540000 Sobic001G540000 Sobic001G220800--Sobic001G540000 Sobic002G282600 Sobic002G282600 Sobic001G220800--Sobic002G282600 Sobic002G091200 Sobic002G091200 Sobic001G220800--Sobic002G091200 Sobic004G131400 Sobic004G131400 Sobic001G220800--Sobic004G131400 Sobic004G025500 Sobic004G025500 Sobic001G220800--Sobic004G025500 Sobic004G025600 Sobic004G025600 Sobic001G220800--Sobic004G025600 Sobic005G010000 Sobic005G010000 Sobic001G220800--Sobic005G010000 Sobic003G173800 Sobic003G173800 Sobic001G220800--Sobic003G173800 Sobic004G350400--Sobic001G540000 Sobic010G056500 Sobic010G056500 Sobic004G350400--Sobic010G056500 Sobic004G350400--Sobic004G131400 Sobic004G350400--Sobic002G091200 Sobic004G350400--Sobic004G025600 Sobic004G350400--Sobic001G220800 Sobic004G350400--Sobic002G282600 Sobic002G106800 Sobic002G106800 Sobic004G350400--Sobic002G106800 Sobic004G350400--Sobic003G173800 Sobic001G540000--Sobic004G025600 Sobic001G540000--Sobic002G091200 Sobic001G540000--Sobic010G056500 Sobic001G540000--Sobic004G131400 Sobic001G540000--Sobic004G350400 Sobic001G540000--Sobic002G106800 Sobic004G137200 Sobic004G137200 Sobic001G540000--Sobic004G137200 Sobic001G540000--Sobic003G173800 Sobic001G540000--Sobic005G010000 Sobic002G282600--Sobic004G350400 Sobic002G091300 Sobic002G091300 Sobic002G282600--Sobic002G091300 Sobic004G147700 Sobic004G147700 Sobic002G282600--Sobic004G147700 Sobic002G282600--Sobic004G131400 Sobic002G282600--Sobic010G056500 Sobic009G116100 Sobic009G116100 Sobic002G282600--Sobic009G116100 Sobic002G282600--Sobic002G091200 Sobic002G282600--Sobic001G540000 Sobic002G282600--Sobic004G025600 Sobic002G091200--Sobic001G540000 Sobic002G091200--Sobic004G025600 Sobic002G091200--Sobic002G106800 Sobic002G091200--Sobic003G173800 Sobic002G091200--Sobic004G350400 Sobic002G091200--Sobic010G056500 Sobic002G091200--Sobic004G137200 Sobic002G091200--Sobic004G131400 Sobic002G091200--Sobic005G010000 Sobic004G131400--Sobic010G056500 Sobic004G131400--Sobic004G025600 Sobic004G131400--Sobic001G540000 Sobic004G131400--Sobic004G350400 Sobic004G131400--Sobic002G091200 Sobic001G332200 Sobic001G332200 Sobic004G131400--Sobic001G332200 Sobic004G131400--Sobic002G282600 Sobic006G136700 Sobic006G136700 Sobic004G131400--Sobic006G136700 Sobic004G131400--Sobic004G137200 Sobic009G098900 Sobic009G098900 Sobic004G025500--Sobic009G098900 Sobic004G025500--Sobic004G137200 Sobic004G025500--Sobic003G173800 Sobic004G025500--Sobic002G106800 Sobic004G251900 Sobic004G251900 Sobic004G025500--Sobic004G251900 Sobic004G025500--Sobic005G010000 Sobic002G283000 Sobic002G283000 Sobic004G025500--Sobic002G283000 Sobic009G089532 Sobic009G089532 Sobic004G025500--Sobic009G089532 Sobic010G161400 Sobic010G161400 Sobic004G025500--Sobic010G161400 Sobic004G025600--Sobic001G540000 Sobic004G025600--Sobic004G131400 Sobic004G025600--Sobic010G056500 Sobic004G025600--Sobic002G091200 Sobic004G025600--Sobic004G350400 Sobic004G025600--Sobic004G137200 Sobic004G025600--Sobic002G106800 Sobic004G025600--Sobic003G173800 Sobic004G025600--Sobic001G332200 Sobic005G010000--Sobic003G173800 Sobic005G010000--Sobic002G106800 Sobic007G100800 Sobic007G100800 Sobic005G010000--Sobic007G100800 Sobic003G061700 Sobic003G061700 Sobic005G010000--Sobic003G061700 Sobic008G186900 Sobic008G186900 Sobic005G010000--Sobic008G186900 Sobic005G010000--Sobic010G161400 Sobic005G010000--Sobic009G098900 Sobic005G010000--Sobic004G137200 Sobic005G010000--Sobic002G091200 Sobic003G173800--Sobic005G010000 Sobic003G173800--Sobic002G106800 Sobic003G173800--Sobic009G098900 Sobic003G173800--Sobic010G161400 Sobic003G173800--Sobic008G186900 Sobic003G173800--Sobic004G137200 Sobic003G173800--Sobic002G091200 Sobic003G173800--Sobic007G100800 Sobic003G173800--Sobic003G061700
Octagon: transcription factors


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