Gene annotation
Transcriptome id Sobic.004G131400.1
Synonym Sb04g012170, PDF2.2, LCR69
Functional annotation DEF7 - Defensin and Defensin-like DEFL family, expressed
UniProt C5Y0J0
Pfam PF00304
Panther DB PTHR33147 PTHR33147:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G02100 : low-molecular-weight cysteine-rich 69
RAP-DB (Rice) LOC_Os02g41904.1 : DEF7 - Defensin and Defensin-like DEFL family, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G056500 - -
2 Sobic.004G025600 - -
3 Sobic.001G540000 expansin precursor, putative, expressed -
4 Sobic.004G350400 pectinesterase, putative, expressed K01051: pectinesterase
5 Sobic.002G091200 pectinesterase inhibitor domain containing protein, expressed -
6 Sobic.001G332200 cysteine proteinase EP-B 1 precursor, putative, expressed -
7 Sobic.002G282600 copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
8 Sobic.006G136700 GPI-anchored protein, putative, expressed -
9 Sobic.004G137200 fasciclin-like arabinogalactan precursor protein, putative, expressed -
10 Sobic.002G106800 expressed protein -
11 Sobic.001G220800 AGC_AGC_other_NDRh_TRCd.3 - ACG kinases include homologs to PKA, PKG and PKC, expressed K08790: STK38, serine/threonine kinase 38
12 Sobic.003G173800 polygalacturonase, putative, expressed -
13 Sobic.005G010000 expressed protein -
14 Sobic.009G116100 conserved hypothetical protein -
15 Sobic.004G025500 - -
16 Sobic.002G091300 pectinesterase inhibitor domain containing protein, expressed -
17 Sobic.009G098900 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor
18 Sobic.002G417401 - -
19 Sobic.001G024300 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
20 Sobic.003G438500 THION25 - Plant thionin family protein precursor, expressed -


Gene co-expression network
sample Sobic004G131400 Sobic004G131400 Sobic010G056500 Sobic010G056500 Sobic004G131400--Sobic010G056500 Sobic004G025600 Sobic004G025600 Sobic004G131400--Sobic004G025600 Sobic001G540000 Sobic001G540000 Sobic004G131400--Sobic001G540000 Sobic004G350400 Sobic004G350400 Sobic004G131400--Sobic004G350400 Sobic002G091200 Sobic002G091200 Sobic004G131400--Sobic002G091200 Sobic001G332200 Sobic001G332200 Sobic004G131400--Sobic001G332200 Sobic002G282600 Sobic002G282600 Sobic004G131400--Sobic002G282600 Sobic006G136700 Sobic006G136700 Sobic004G131400--Sobic006G136700 Sobic004G137200 Sobic004G137200 Sobic004G131400--Sobic004G137200 Sobic010G056500--Sobic004G131400 Sobic010G056500--Sobic004G025600 Sobic010G056500--Sobic001G540000 Sobic010G056500--Sobic004G350400 Sobic010G056500--Sobic002G091200 Sobic010G056500--Sobic001G332200 Sobic010G056500--Sobic002G282600 Sobic002G106800 Sobic002G106800 Sobic010G056500--Sobic002G106800 Sobic010G056500--Sobic004G137200 Sobic004G025600--Sobic001G540000 Sobic004G025600--Sobic004G131400 Sobic004G025600--Sobic010G056500 Sobic004G025600--Sobic002G091200 Sobic004G025600--Sobic004G350400 Sobic004G025600--Sobic004G137200 Sobic004G025600--Sobic002G106800 Sobic003G173800 Sobic003G173800 Sobic004G025600--Sobic003G173800 Sobic004G025600--Sobic001G332200 Sobic001G540000--Sobic004G025600 Sobic001G540000--Sobic002G091200 Sobic001G540000--Sobic010G056500 Sobic001G540000--Sobic004G131400 Sobic001G540000--Sobic004G350400 Sobic001G540000--Sobic002G106800 Sobic001G540000--Sobic004G137200 Sobic001G540000--Sobic003G173800 Sobic005G010000 Sobic005G010000 Sobic001G540000--Sobic005G010000 Sobic004G350400--Sobic001G540000 Sobic004G350400--Sobic010G056500 Sobic004G350400--Sobic004G131400 Sobic004G350400--Sobic002G091200 Sobic004G350400--Sobic004G025600 Sobic001G220800 Sobic001G220800 Sobic004G350400--Sobic001G220800 Sobic004G350400--Sobic002G282600 Sobic004G350400--Sobic002G106800 Sobic004G350400--Sobic003G173800 Sobic002G091200--Sobic001G540000 Sobic002G091200--Sobic004G025600 Sobic002G091200--Sobic002G106800 Sobic002G091200--Sobic003G173800 Sobic002G091200--Sobic004G350400 Sobic002G091200--Sobic010G056500 Sobic002G091200--Sobic004G137200 Sobic002G091200--Sobic004G131400 Sobic002G091200--Sobic005G010000 Sobic001G332200--Sobic006G136700 Sobic002G157900 Sobic002G157900 Sobic001G332200--Sobic002G157900 Sobic001G024300 Sobic001G024300 Sobic001G332200--Sobic001G024300 Sobic001G332200--Sobic004G131400 Sobic001G332200--Sobic010G056500 Sobic002G417401 Sobic002G417401 Sobic001G332200--Sobic002G417401 Sobic009G116100 Sobic009G116100 Sobic001G332200--Sobic009G116100 Sobic001G332200--Sobic004G025600 Sobic009G090400 Sobic009G090400 Sobic001G332200--Sobic009G090400 Sobic002G282600--Sobic004G350400 Sobic002G091300 Sobic002G091300 Sobic002G282600--Sobic002G091300 Sobic004G147700 Sobic004G147700 Sobic002G282600--Sobic004G147700 Sobic002G282600--Sobic004G131400 Sobic002G282600--Sobic010G056500 Sobic002G282600--Sobic009G116100 Sobic002G282600--Sobic002G091200 Sobic002G282600--Sobic001G540000 Sobic002G282600--Sobic004G025600 Sobic006G136700--Sobic001G332200 Sobic006G136700--Sobic001G024300 Sobic006G136700--Sobic009G116100 Sobic006G136700--Sobic002G157900 Sobic006G136700--Sobic002G417401 Sobic006G136700--Sobic009G090400 Sobic006G136700--Sobic004G131400 Sobic003G009600 Sobic003G009600 Sobic006G136700--Sobic003G009600 Sobic007G222200 Sobic007G222200 Sobic006G136700--Sobic007G222200 Sobic009G098900 Sobic009G098900 Sobic004G137200--Sobic009G098900 Sobic004G137200--Sobic003G173800 Sobic004G137200--Sobic002G106800 Sobic004G025500 Sobic004G025500 Sobic004G137200--Sobic004G025500 Sobic004G137200--Sobic005G010000 Sobic009G089532 Sobic009G089532 Sobic004G137200--Sobic009G089532 Sobic004G137200--Sobic001G540000 Sobic004G137200--Sobic002G091200 Sobic002G283000 Sobic002G283000 Sobic004G137200--Sobic002G283000
Octagon: transcription factors


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