Gene annotation
Transcriptome id Sobic.002G282600.5,Sobic.002G282600.1,Sobic.002G282600.2,Sobic.002G282600.3,Sobic.002G282600.6,Sobic.002G282600.4
Synonym Sb02g031550
Functional annotation copper methylamine oxidase precursor, putative, expressed
UniProt A0A1W0W676 , A0A1W0W643 , A0A1W0W617 , A0A1W0W650 , A0A1W0W629
Pfam PF01179 PF02728 PF01179
Panther DB PTHR10638 PTHR10638:SF34
NCBI CDD -
KEGG Orthology K00276; AOC3, AOC2, primary-amine oxidase
Gene Ontology GO:0009308; amine metabolic process GO:0008131primary amine oxidase activity GO:0005507copper ion binding


Orthologs (automatic annotation)
TAIR AT2G42490 : Copper amine oxidase family protein
RAP-DB (Rice) LOC_Os04g40040.1 : copper methylamine oxidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a011011
Brachypodium KQJ83144 , KQK00069
Barley HORVU2Hr1G082420.8 , HORVU2Hr1G082420.4 , HORVU2Hr1G082420.5 , HORVU2Hr1G082420.6 , HORVU2Hr1G082420.1 , HORVU2Hr1G082420.2 , HORVU2Hr1G082420.3 , HORVU2Hr1G082420.10 , HORVU6Hr1G053060.2 , HORVU6Hr1G053060.3 , HORVU6Hr1G053060.1 , HORVU6Hr1G053060.6 , HORVU6Hr1G053060.7 , HORVU6Hr1G053060.4 , HORVU6Hr1G053060.5 , HORVU6Hr1G053060.8 , HORVU6Hr1G053060.9 , HORVU2Hr1G082420.7 , HORVU6Hr1G053060.13 , HORVU6Hr1G053060.14 , HORVU6Hr1G053060.10 , HORVU6Hr1G053060.11
Wheat TraesCS2D02G335300 , TraesCS2D02G335300 , TraesCS2D02G335300 , TraesCS6D02G191300 , TraesCS6D02G191300 , TraesCS2B02G354400 , TraesCS2B02G354400 , TraesCS2B02G354400 , TraesCS2B02G354400 , TraesCS6A02G207600 , TraesCS6A02G207600 , TraesCS6A02G207600 , TraesCS2A02G327600 , TraesCS2A02G327600 , TraesCS6B02G236300 , TraesCS6B02G236300 , TraesCS6B02G236300 , TraesCS6B02G236300
Populus PNT14713 , PNT14712 , PNT14711 , PNT14710 , PNT14715 , PNT14714


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G350400 pectinesterase, putative, expressed K01051: pectinesterase
2 Sobic.002G091300 pectinesterase inhibitor domain containing protein, expressed -
3 Sobic.004G147700 pectinesterase inhibitor domain containing protein, putative, expressed -
4 Sobic.004G131400 DEF7 - Defensin and Defensin-like DEFL family, expressed -
5 Sobic.010G056500 - -
6 Sobic.009G116100 conserved hypothetical protein -
7 Sobic.002G091200 pectinesterase inhibitor domain containing protein, expressed -
8 Sobic.001G540000 expansin precursor, putative, expressed -
9 Sobic.004G025600 - -
10 Sobic.001G220800 AGC_AGC_other_NDRh_TRCd.3 - ACG kinases include homologs to PKA, PKG and PKC, expressed K08790: STK38, serine/threonine kinase 38
11 Sobic.006G136700 GPI-anchored protein, putative, expressed -
12 Sobic.005G010000 expressed protein -
13 Sobic.001G332200 cysteine proteinase EP-B 1 precursor, putative, expressed -
14 Sobic.002G106800 expressed protein -
15 Sobic.003G173800 polygalacturonase, putative, expressed -
16 Sobic.003G438500 THION25 - Plant thionin family protein precursor, expressed -
17 Sobic.001G024300 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
18 Sobic.005G031700 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
19 Sobic.009G216400 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
20 Sobic.004G137200 fasciclin-like arabinogalactan precursor protein, putative, expressed -


Gene co-expression network
sample Sobic002G282600 Sobic002G282600 Sobic004G350400 Sobic004G350400 Sobic002G282600--Sobic004G350400 Sobic002G091300 Sobic002G091300 Sobic002G282600--Sobic002G091300 Sobic004G147700 Sobic004G147700 Sobic002G282600--Sobic004G147700 Sobic004G131400 Sobic004G131400 Sobic002G282600--Sobic004G131400 Sobic010G056500 Sobic010G056500 Sobic002G282600--Sobic010G056500 Sobic009G116100 Sobic009G116100 Sobic002G282600--Sobic009G116100 Sobic002G091200 Sobic002G091200 Sobic002G282600--Sobic002G091200 Sobic001G540000 Sobic001G540000 Sobic002G282600--Sobic001G540000 Sobic004G025600 Sobic004G025600 Sobic002G282600--Sobic004G025600 Sobic004G350400--Sobic001G540000 Sobic004G350400--Sobic010G056500 Sobic004G350400--Sobic004G131400 Sobic004G350400--Sobic002G091200 Sobic004G350400--Sobic004G025600 Sobic001G220800 Sobic001G220800 Sobic004G350400--Sobic001G220800 Sobic004G350400--Sobic002G282600 Sobic002G106800 Sobic002G106800 Sobic004G350400--Sobic002G106800 Sobic003G173800 Sobic003G173800 Sobic004G350400--Sobic003G173800 Sobic002G091300--Sobic002G282600 Sobic002G091300--Sobic009G116100 Sobic002G091300--Sobic004G350400 Sobic001G024300 Sobic001G024300 Sobic002G091300--Sobic001G024300 Sobic006G136700 Sobic006G136700 Sobic002G091300--Sobic006G136700 Sobic002G091300--Sobic004G147700 Sobic003G009600 Sobic003G009600 Sobic002G091300--Sobic003G009600 Sobic002G417401 Sobic002G417401 Sobic002G091300--Sobic002G417401 Sobic002G091300--Sobic010G056500 Sobic004G147700--Sobic002G282600 Sobic004G147700--Sobic002G091300 Sobic004G147700--Sobic009G116100 Sobic005G031700 Sobic005G031700 Sobic004G147700--Sobic005G031700 Sobic004G147700--Sobic004G350400 Sobic004G147700--Sobic006G136700 Sobic010G230200 Sobic010G230200 Sobic004G147700--Sobic010G230200 Sobic004G147700--Sobic004G131400 Sobic004G147700--Sobic001G220800 Sobic004G131400--Sobic010G056500 Sobic004G131400--Sobic004G025600 Sobic004G131400--Sobic001G540000 Sobic004G131400--Sobic004G350400 Sobic004G131400--Sobic002G091200 Sobic001G332200 Sobic001G332200 Sobic004G131400--Sobic001G332200 Sobic004G131400--Sobic002G282600 Sobic004G131400--Sobic006G136700 Sobic004G137200 Sobic004G137200 Sobic004G131400--Sobic004G137200 Sobic010G056500--Sobic004G131400 Sobic010G056500--Sobic004G025600 Sobic010G056500--Sobic001G540000 Sobic010G056500--Sobic004G350400 Sobic010G056500--Sobic002G091200 Sobic010G056500--Sobic001G332200 Sobic010G056500--Sobic002G282600 Sobic010G056500--Sobic002G106800 Sobic010G056500--Sobic004G137200 Sobic009G116100--Sobic001G024300 Sobic009G116100--Sobic006G136700 Sobic009G116100--Sobic003G009600 Sobic009G116100--Sobic001G332200 Sobic009G116100--Sobic002G091300 Sobic002G157900 Sobic002G157900 Sobic009G116100--Sobic002G157900 Sobic009G116100--Sobic002G417401 Sobic009G116100--Sobic002G282600 Sobic009G089000 Sobic009G089000 Sobic009G116100--Sobic009G089000 Sobic002G091200--Sobic001G540000 Sobic002G091200--Sobic004G025600 Sobic002G091200--Sobic002G106800 Sobic002G091200--Sobic003G173800 Sobic002G091200--Sobic004G350400 Sobic002G091200--Sobic010G056500 Sobic002G091200--Sobic004G137200 Sobic002G091200--Sobic004G131400 Sobic005G010000 Sobic005G010000 Sobic002G091200--Sobic005G010000 Sobic001G540000--Sobic004G025600 Sobic001G540000--Sobic002G091200 Sobic001G540000--Sobic010G056500 Sobic001G540000--Sobic004G131400 Sobic001G540000--Sobic004G350400 Sobic001G540000--Sobic002G106800 Sobic001G540000--Sobic004G137200 Sobic001G540000--Sobic003G173800 Sobic001G540000--Sobic005G010000 Sobic004G025600--Sobic001G540000 Sobic004G025600--Sobic004G131400 Sobic004G025600--Sobic010G056500 Sobic004G025600--Sobic002G091200 Sobic004G025600--Sobic004G350400 Sobic004G025600--Sobic004G137200 Sobic004G025600--Sobic002G106800 Sobic004G025600--Sobic003G173800 Sobic004G025600--Sobic001G332200
Octagon: transcription factors


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