Gene annotation
Transcriptome id Sobic.001G540000.2
Synonym Sb01g050240, EXPB2, ATHEXPBETA1.4, ATEXPB2
Functional annotation expansin precursor, putative, expressed
UniProt A0A1Z5SC75
Pfam PF03330 PF01357
Panther DB PTHR31692 PTHR31692:SF21
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65680 : expansin B2
RAP-DB (Rice) LOC_Os03g01650.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a021677 , Zm00025a021679 , Zm00025a021678 , Zm00025a003332 , Zm00025a024285 , Zm00025a024287 , Zm00025a021682 , Zm00025a021683 , Zm00025a021680 , Zm00025a021681
Brachypodium -
Barley HORVU0Hr1G005490.1
Wheat TraesCS3A02G011100
Populus -


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cDNA sequences
Sobic.001G540000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G025600 - -
2 Sobic.002G091200 pectinesterase inhibitor domain containing protein, expressed -
3 Sobic.010G056500 - -
4 Sobic.004G131400 DEF7 - Defensin and Defensin-like DEFL family, expressed -
5 Sobic.004G350400 pectinesterase, putative, expressed K01051: pectinesterase
6 Sobic.002G106800 expressed protein -
7 Sobic.004G137200 fasciclin-like arabinogalactan precursor protein, putative, expressed -
8 Sobic.003G173800 polygalacturonase, putative, expressed -
9 Sobic.005G010000 expressed protein -
10 Sobic.004G025500 - -
11 Sobic.009G098900 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor
12 Sobic.001G220800 AGC_AGC_other_NDRh_TRCd.3 - ACG kinases include homologs to PKA, PKG and PKC, expressed K08790: STK38, serine/threonine kinase 38
13 Sobic.002G282600 copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
14 Sobic.002G283000 transferase family protein, putative, expressed -
15 Sobic.010G161400 polygalacturonase, putative, expressed K01213: galacturan 1,4-alpha-galacturonidase
16 Sobic.003G438500 THION25 - Plant thionin family protein precursor, expressed -
17 Sobic.001G332200 cysteine proteinase EP-B 1 precursor, putative, expressed -
18 Sobic.004G251900 tetraspanin family protein, putative, expressed -
19 Sobic.008G186900 SCP-like extracellular protein, expressed -
20 Sobic.009G089532 - -


Gene co-expression network
sample Sobic001G540000 Sobic001G540000 Sobic004G025600 Sobic004G025600 Sobic001G540000--Sobic004G025600 Sobic002G091200 Sobic002G091200 Sobic001G540000--Sobic002G091200 Sobic010G056500 Sobic010G056500 Sobic001G540000--Sobic010G056500 Sobic004G131400 Sobic004G131400 Sobic001G540000--Sobic004G131400 Sobic004G350400 Sobic004G350400 Sobic001G540000--Sobic004G350400 Sobic002G106800 Sobic002G106800 Sobic001G540000--Sobic002G106800 Sobic004G137200 Sobic004G137200 Sobic001G540000--Sobic004G137200 Sobic003G173800 Sobic003G173800 Sobic001G540000--Sobic003G173800 Sobic005G010000 Sobic005G010000 Sobic001G540000--Sobic005G010000 Sobic004G025600--Sobic001G540000 Sobic004G025600--Sobic004G131400 Sobic004G025600--Sobic010G056500 Sobic004G025600--Sobic002G091200 Sobic004G025600--Sobic004G350400 Sobic004G025600--Sobic004G137200 Sobic004G025600--Sobic002G106800 Sobic004G025600--Sobic003G173800 Sobic001G332200 Sobic001G332200 Sobic004G025600--Sobic001G332200 Sobic002G091200--Sobic001G540000 Sobic002G091200--Sobic004G025600 Sobic002G091200--Sobic002G106800 Sobic002G091200--Sobic003G173800 Sobic002G091200--Sobic004G350400 Sobic002G091200--Sobic010G056500 Sobic002G091200--Sobic004G137200 Sobic002G091200--Sobic004G131400 Sobic002G091200--Sobic005G010000 Sobic010G056500--Sobic004G131400 Sobic010G056500--Sobic004G025600 Sobic010G056500--Sobic001G540000 Sobic010G056500--Sobic004G350400 Sobic010G056500--Sobic002G091200 Sobic010G056500--Sobic001G332200 Sobic002G282600 Sobic002G282600 Sobic010G056500--Sobic002G282600 Sobic010G056500--Sobic002G106800 Sobic010G056500--Sobic004G137200 Sobic004G131400--Sobic010G056500 Sobic004G131400--Sobic004G025600 Sobic004G131400--Sobic001G540000 Sobic004G131400--Sobic004G350400 Sobic004G131400--Sobic002G091200 Sobic004G131400--Sobic001G332200 Sobic004G131400--Sobic002G282600 Sobic006G136700 Sobic006G136700 Sobic004G131400--Sobic006G136700 Sobic004G131400--Sobic004G137200 Sobic004G350400--Sobic001G540000 Sobic004G350400--Sobic010G056500 Sobic004G350400--Sobic004G131400 Sobic004G350400--Sobic002G091200 Sobic004G350400--Sobic004G025600 Sobic001G220800 Sobic001G220800 Sobic004G350400--Sobic001G220800 Sobic004G350400--Sobic002G282600 Sobic004G350400--Sobic002G106800 Sobic004G350400--Sobic003G173800 Sobic002G106800--Sobic003G173800 Sobic002G106800--Sobic005G010000 Sobic009G098900 Sobic009G098900 Sobic002G106800--Sobic009G098900 Sobic002G106800--Sobic002G091200 Sobic002G106800--Sobic004G137200 Sobic002G106800--Sobic001G540000 Sobic010G161400 Sobic010G161400 Sobic002G106800--Sobic010G161400 Sobic004G025500 Sobic004G025500 Sobic002G106800--Sobic004G025500 Sobic008G186900 Sobic008G186900 Sobic002G106800--Sobic008G186900 Sobic004G137200--Sobic009G098900 Sobic004G137200--Sobic003G173800 Sobic004G137200--Sobic002G106800 Sobic004G137200--Sobic004G025500 Sobic004G137200--Sobic005G010000 Sobic009G089532 Sobic009G089532 Sobic004G137200--Sobic009G089532 Sobic004G137200--Sobic001G540000 Sobic004G137200--Sobic002G091200 Sobic002G283000 Sobic002G283000 Sobic004G137200--Sobic002G283000 Sobic003G173800--Sobic005G010000 Sobic003G173800--Sobic002G106800 Sobic003G173800--Sobic009G098900 Sobic003G173800--Sobic010G161400 Sobic003G173800--Sobic008G186900 Sobic003G173800--Sobic004G137200 Sobic003G173800--Sobic002G091200 Sobic007G100800 Sobic007G100800 Sobic003G173800--Sobic007G100800 Sobic003G061700 Sobic003G061700 Sobic003G173800--Sobic003G061700 Sobic005G010000--Sobic003G173800 Sobic005G010000--Sobic002G106800 Sobic005G010000--Sobic007G100800 Sobic005G010000--Sobic003G061700 Sobic005G010000--Sobic008G186900 Sobic005G010000--Sobic010G161400 Sobic005G010000--Sobic009G098900 Sobic005G010000--Sobic004G137200 Sobic005G010000--Sobic002G091200
Octagon: transcription factors


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