Gene annotation
Transcriptome id Sobic.002G091200.1
Synonym Sb02g007550
Functional annotation pectinesterase inhibitor domain containing protein, expressed
UniProt C5X227
Pfam PF04043
Panther DB PTHR31080 PTHR31080:SF21
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0004857; enzyme inhibitor activity


Orthologs (automatic annotation)
TAIR AT3G47380 : Plant invertase/pectin methylesterase inhibitor superfamily protein
RAP-DB (Rice) LOC_Os07g14340.1 : retrotransposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a045508 , Zm00025a045507 , Zm00025a013610 , Zm00025a013611
Brachypodium KQK20256
Barley HORVU5Hr1G107840.1 , HORVU5Hr1G107840.3 , HORVU5Hr1G107840.2 , HORVU5Hr1G107840.4 , HORVU5Hr1G108200.2 , HORVU5Hr1G108200.3 , HORVU5Hr1G108200.1
Wheat TraesCS5B02G458500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G540000 expansin precursor, putative, expressed -
2 Sobic.004G025600 - -
3 Sobic.002G106800 expressed protein -
4 Sobic.003G173800 polygalacturonase, putative, expressed -
5 Sobic.004G350400 pectinesterase, putative, expressed K01051: pectinesterase
6 Sobic.010G056500 - -
7 Sobic.004G137200 fasciclin-like arabinogalactan precursor protein, putative, expressed -
8 Sobic.004G131400 DEF7 - Defensin and Defensin-like DEFL family, expressed -
9 Sobic.005G010000 expressed protein -
10 Sobic.009G098900 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor
11 Sobic.004G025500 - -
12 Sobic.010G161400 polygalacturonase, putative, expressed K01213: galacturan 1,4-alpha-galacturonidase
13 Sobic.002G282600 copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
14 Sobic.001G220800 AGC_AGC_other_NDRh_TRCd.3 - ACG kinases include homologs to PKA, PKG and PKC, expressed K08790: STK38, serine/threonine kinase 38
15 Sobic.003G438500 THION25 - Plant thionin family protein precursor, expressed -
16 Sobic.008G186900 SCP-like extracellular protein, expressed -
17 Sobic.002G283000 transferase family protein, putative, expressed -
18 Sobic.007G100800 CSLD3 - cellulose synthase-like family D, expressed -
19 Sobic.004G251900 tetraspanin family protein, putative, expressed -
20 Sobic.009G089532 - -


Gene co-expression network
sample Sobic002G091200 Sobic002G091200 Sobic001G540000 Sobic001G540000 Sobic002G091200--Sobic001G540000 Sobic004G025600 Sobic004G025600 Sobic002G091200--Sobic004G025600 Sobic002G106800 Sobic002G106800 Sobic002G091200--Sobic002G106800 Sobic003G173800 Sobic003G173800 Sobic002G091200--Sobic003G173800 Sobic004G350400 Sobic004G350400 Sobic002G091200--Sobic004G350400 Sobic010G056500 Sobic010G056500 Sobic002G091200--Sobic010G056500 Sobic004G137200 Sobic004G137200 Sobic002G091200--Sobic004G137200 Sobic004G131400 Sobic004G131400 Sobic002G091200--Sobic004G131400 Sobic005G010000 Sobic005G010000 Sobic002G091200--Sobic005G010000 Sobic001G540000--Sobic004G025600 Sobic001G540000--Sobic002G091200 Sobic001G540000--Sobic010G056500 Sobic001G540000--Sobic004G131400 Sobic001G540000--Sobic004G350400 Sobic001G540000--Sobic002G106800 Sobic001G540000--Sobic004G137200 Sobic001G540000--Sobic003G173800 Sobic001G540000--Sobic005G010000 Sobic004G025600--Sobic001G540000 Sobic004G025600--Sobic004G131400 Sobic004G025600--Sobic010G056500 Sobic004G025600--Sobic002G091200 Sobic004G025600--Sobic004G350400 Sobic004G025600--Sobic004G137200 Sobic004G025600--Sobic002G106800 Sobic004G025600--Sobic003G173800 Sobic001G332200 Sobic001G332200 Sobic004G025600--Sobic001G332200 Sobic002G106800--Sobic003G173800 Sobic002G106800--Sobic005G010000 Sobic009G098900 Sobic009G098900 Sobic002G106800--Sobic009G098900 Sobic002G106800--Sobic002G091200 Sobic002G106800--Sobic004G137200 Sobic002G106800--Sobic001G540000 Sobic010G161400 Sobic010G161400 Sobic002G106800--Sobic010G161400 Sobic004G025500 Sobic004G025500 Sobic002G106800--Sobic004G025500 Sobic008G186900 Sobic008G186900 Sobic002G106800--Sobic008G186900 Sobic003G173800--Sobic005G010000 Sobic003G173800--Sobic002G106800 Sobic003G173800--Sobic009G098900 Sobic003G173800--Sobic010G161400 Sobic003G173800--Sobic008G186900 Sobic003G173800--Sobic004G137200 Sobic003G173800--Sobic002G091200 Sobic007G100800 Sobic007G100800 Sobic003G173800--Sobic007G100800 Sobic003G061700 Sobic003G061700 Sobic003G173800--Sobic003G061700 Sobic004G350400--Sobic001G540000 Sobic004G350400--Sobic010G056500 Sobic004G350400--Sobic004G131400 Sobic004G350400--Sobic002G091200 Sobic004G350400--Sobic004G025600 Sobic001G220800 Sobic001G220800 Sobic004G350400--Sobic001G220800 Sobic002G282600 Sobic002G282600 Sobic004G350400--Sobic002G282600 Sobic004G350400--Sobic002G106800 Sobic004G350400--Sobic003G173800 Sobic010G056500--Sobic004G131400 Sobic010G056500--Sobic004G025600 Sobic010G056500--Sobic001G540000 Sobic010G056500--Sobic004G350400 Sobic010G056500--Sobic002G091200 Sobic010G056500--Sobic001G332200 Sobic010G056500--Sobic002G282600 Sobic010G056500--Sobic002G106800 Sobic010G056500--Sobic004G137200 Sobic004G137200--Sobic009G098900 Sobic004G137200--Sobic003G173800 Sobic004G137200--Sobic002G106800 Sobic004G137200--Sobic004G025500 Sobic004G137200--Sobic005G010000 Sobic009G089532 Sobic009G089532 Sobic004G137200--Sobic009G089532 Sobic004G137200--Sobic001G540000 Sobic004G137200--Sobic002G091200 Sobic002G283000 Sobic002G283000 Sobic004G137200--Sobic002G283000 Sobic004G131400--Sobic010G056500 Sobic004G131400--Sobic004G025600 Sobic004G131400--Sobic001G540000 Sobic004G131400--Sobic004G350400 Sobic004G131400--Sobic002G091200 Sobic004G131400--Sobic001G332200 Sobic004G131400--Sobic002G282600 Sobic006G136700 Sobic006G136700 Sobic004G131400--Sobic006G136700 Sobic004G131400--Sobic004G137200 Sobic005G010000--Sobic003G173800 Sobic005G010000--Sobic002G106800 Sobic005G010000--Sobic007G100800 Sobic005G010000--Sobic003G061700 Sobic005G010000--Sobic008G186900 Sobic005G010000--Sobic010G161400 Sobic005G010000--Sobic009G098900 Sobic005G010000--Sobic004G137200 Sobic005G010000--Sobic002G091200
Octagon: transcription factors


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