Gene annotation
Transcriptome id Sobic.007G100800.1
Synonym ATCSLD4, CSLD4, Sb07g011890
Functional annotation CSLD3 - cellulose synthase-like family D, expressed
UniProt C5YK15
Pfam PF03552 PF14570
Panther DB PTHR13301:SF32 PTHR13301
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0016760cellulose synthase (UDP-forming) activity


Orthologs (automatic annotation)
TAIR AT4G38190 : cellulose synthase like D4
RAP-DB (Rice) LOC_Os08g25710.1 : CSLD3 - cellulose synthase-like family D, expressed
MaizeGDB (Corn) Zm00025a048344 , Zm00025a027595 , Zm00025a054306 , Zm00025a050769 , Zm00025a006226 , Zm00025a050280 , Zm00025a006680
Brachypodium KQK09742 , KQK15829 , KQK02740 , KQJ97023 , KQJ96300 , KQK19741
Barley HORVU7Hr1G005270.1 , HORVU7Hr1G005270.3 , HORVU7Hr1G005270.2 , HORVU7Hr1G005270.5 , HORVU7Hr1G005270.4 , HORVU0Hr1G011610.1 , HORVU2Hr1G021410.1 , HORVU7Hr1G081850.1 , HORVU7Hr1G081850.3 , HORVU7Hr1G081850.2 , HORVU7Hr1G081850.5 , HORVU7Hr1G081850.4 , HORVU7Hr1G081850.7 , HORVU7Hr1G081850.6 , HORVU2Hr1G021450.2 , HORVU2Hr1G021450.3 , HORVU2Hr1G021450.1 , HORVU2Hr1G021450.6 , HORVU2Hr1G021450.4 , HORVU2Hr1G021450.5 , HORVU3Hr1G071770.22 , HORVU3Hr1G071770.23 , HORVU3Hr1G071770.20 , HORVU3Hr1G071770.21 , HORVU5Hr1G023640.2 , HORVU5Hr1G023640.3 , HORVU5Hr1G023640.8 , HORVU5Hr1G023640.9 , HORVU3Hr1G071770.19 , HORVU3Hr1G071770.18 , HORVU3Hr1G071770.17 , HORVU3Hr1G071770.16 , HORVU3Hr1G071770.15 , HORVU3Hr1G071770.14 , HORVU3Hr1G071770.13 , HORVU3Hr1G071770.12 , HORVU3Hr1G071770.11 , HORVU3Hr1G071770.10 , HORVU5Hr1G023640.6 , HORVU5Hr1G023640.7 , HORVU5Hr1G023640.4 , HORVU5Hr1G023640.5 , HORVU2Hr1G042240.4 , HORVU2Hr1G042240.5 , HORVU2Hr1G042240.1 , HORVU2Hr1G042240.2 , HORVU2Hr1G042240.3 , HORVU5Hr1G023640.1 , HORVU3Hr1G071770.7 , HORVU3Hr1G071770.6 , HORVU3Hr1G071770.5 , HORVU3Hr1G071770.4 , HORVU3Hr1G071770.3 , HORVU3Hr1G071770.2 , HORVU3Hr1G071770.1 , HORVU3Hr1G071770.9 , HORVU3Hr1G071770.8
Wheat TraesCS2D02G126100 , TraesCS2A02G210000 , TraesCS2A02G210400 , TraesCS2D02G216800 , TraesCS7D02G339800 , TraesCS2B02G236200 , TraesCS2B02G236200 , TraesCS2B02G236500 , TraesCS3B02G324500 , TraesCS2B02G144900 , TraesCS7A02G033100 , TraesCS7A02G331500 , TraesCS4A02G456300 , TraesCS5A02G090500 , TraesCS2A02G122600 , TraesCS7B02G243200 , TraesCS5D02G102600 , TraesCS7D02G029700 , TraesCS5B02G096200 , TraesCS3A02G289900 , TraesCS3D02G289600 , TraesCS3D02G289600 , TraesCS3D02G289600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G061700 - -
2 Sobic.008G186900 SCP-like extracellular protein, expressed -
3 Sobic.005G010000 expressed protein -
4 Sobic.010G161400 polygalacturonase, putative, expressed K01213: galacturan 1,4-alpha-galacturonidase
5 Sobic.003G127200 phosphatidylinositol kinase, putative, expressed -
6 Sobic.003G173800 polygalacturonase, putative, expressed -
7 Sobic.002G002600 la domain containing protein, expressed -
8 Sobic.009G098900 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor
9 Sobic.008G028300 pollen allergen, putative, expressed -
10 Sobic.003G438500 THION25 - Plant thionin family protein precursor, expressed -
11 Sobic.002G106800 expressed protein -
12 Sobic.009G089532 - -
13 Sobic.002G351500 pollen allergen Cyn d 23, putative, expressed -
14 Sobic.001G539700 expansin precursor, putative, expressed -
15 Sobic.008G028100 pollen allergen, putative, expressed -
16 Sobic.004G137200 fasciclin-like arabinogalactan precursor protein, putative, expressed -
17 Sobic.009G260900 expressed protein -
18 Sobic.004G025500 - -
19 Sobic.001G002200 myosin, putative, expressed K10357: myosin V
20 Sobic.009G096700 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.20 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -


Gene co-expression network
sample Sobic007G100800 Sobic007G100800 Sobic003G061700 Sobic003G061700 Sobic007G100800--Sobic003G061700 Sobic008G186900 Sobic008G186900 Sobic007G100800--Sobic008G186900 Sobic005G010000 Sobic005G010000 Sobic007G100800--Sobic005G010000 Sobic010G161400 Sobic010G161400 Sobic007G100800--Sobic010G161400 Sobic003G127200 Sobic003G127200 Sobic007G100800--Sobic003G127200 Sobic003G173800 Sobic003G173800 Sobic007G100800--Sobic003G173800 Sobic002G002600 Sobic002G002600 Sobic007G100800--Sobic002G002600 Sobic009G098900 Sobic009G098900 Sobic007G100800--Sobic009G098900 Sobic008G028300 Sobic008G028300 Sobic007G100800--Sobic008G028300 Sobic003G061700--Sobic007G100800 Sobic003G061700--Sobic008G186900 Sobic003G061700--Sobic005G010000 Sobic003G061700--Sobic010G161400 Sobic003G061700--Sobic003G173800 Sobic003G061700--Sobic003G127200 Sobic003G061700--Sobic002G002600 Sobic002G351500 Sobic002G351500 Sobic003G061700--Sobic002G351500 Sobic003G061700--Sobic009G098900 Sobic008G186900--Sobic007G100800 Sobic008G186900--Sobic010G161400 Sobic008G186900--Sobic003G061700 Sobic008G186900--Sobic005G010000 Sobic008G186900--Sobic003G173800 Sobic008G186900--Sobic002G002600 Sobic008G186900--Sobic003G127200 Sobic008G186900--Sobic009G098900 Sobic008G186900--Sobic008G028300 Sobic005G010000--Sobic003G173800 Sobic002G106800 Sobic002G106800 Sobic005G010000--Sobic002G106800 Sobic005G010000--Sobic007G100800 Sobic005G010000--Sobic003G061700 Sobic005G010000--Sobic008G186900 Sobic005G010000--Sobic010G161400 Sobic005G010000--Sobic009G098900 Sobic004G137200 Sobic004G137200 Sobic005G010000--Sobic004G137200 Sobic002G091200 Sobic002G091200 Sobic005G010000--Sobic002G091200 Sobic010G161400--Sobic008G186900 Sobic010G161400--Sobic009G098900 Sobic010G161400--Sobic003G173800 Sobic010G161400--Sobic002G002600 Sobic010G161400--Sobic007G100800 Sobic010G161400--Sobic005G010000 Sobic010G161400--Sobic008G028300 Sobic010G161400--Sobic003G061700 Sobic010G161400--Sobic002G106800 Sobic003G127200--Sobic002G002600 Sobic003G127200--Sobic007G100800 Sobic003G127200--Sobic008G028300 Sobic009G260900 Sobic009G260900 Sobic003G127200--Sobic009G260900 Sobic003G127200--Sobic008G186900 Sobic003G127200--Sobic010G161400 Sobic003G127200--Sobic003G061700 Sobic001G002200 Sobic001G002200 Sobic003G127200--Sobic001G002200 Sobic001G539700 Sobic001G539700 Sobic003G127200--Sobic001G539700 Sobic003G173800--Sobic005G010000 Sobic003G173800--Sobic002G106800 Sobic003G173800--Sobic009G098900 Sobic003G173800--Sobic010G161400 Sobic003G173800--Sobic008G186900 Sobic003G173800--Sobic004G137200 Sobic003G173800--Sobic002G091200 Sobic003G173800--Sobic007G100800 Sobic003G173800--Sobic003G061700 Sobic002G002600--Sobic008G028300 Sobic002G002600--Sobic001G539700 Sobic008G028100 Sobic008G028100 Sobic002G002600--Sobic008G028100 Sobic009G089532 Sobic009G089532 Sobic002G002600--Sobic009G089532 Sobic002G002600--Sobic010G161400 Sobic009G016700 Sobic009G016700 Sobic002G002600--Sobic009G016700 Sobic010G093600 Sobic010G093600 Sobic002G002600--Sobic010G093600 Sobic009G096700 Sobic009G096700 Sobic002G002600--Sobic009G096700 Sobic002G002600--Sobic003G127200 Sobic009G098900--Sobic003G173800 Sobic004G025500 Sobic004G025500 Sobic009G098900--Sobic004G025500 Sobic009G098900--Sobic010G161400 Sobic009G098900--Sobic002G106800 Sobic009G098900--Sobic009G089532 Sobic009G098900--Sobic004G137200 Sobic009G098900--Sobic005G010000 Sobic009G098900--Sobic001G539700 Sobic009G098900--Sobic002G002600 Sobic008G028300--Sobic002G002600 Sobic008G028300--Sobic008G028100 Sobic008G028300--Sobic001G539700 Sobic008G028300--Sobic001G002200 Sobic008G028300--Sobic010G161400 Sobic008G028300--Sobic009G016700 Sobic008G028300--Sobic010G093600 Sobic008G028300--Sobic003G127200 Sobic004G166100 Sobic004G166100 Sobic008G028300--Sobic004G166100
Octagon: transcription factors


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