Gene annotation
Transcriptome id Sobic.010G056500.1
Synonym
Functional annotation -
UniProt A0A194YIJ7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G131400 DEF7 - Defensin and Defensin-like DEFL family, expressed -
2 Sobic.004G025600 - -
3 Sobic.001G540000 expansin precursor, putative, expressed -
4 Sobic.004G350400 pectinesterase, putative, expressed K01051: pectinesterase
5 Sobic.002G091200 pectinesterase inhibitor domain containing protein, expressed -
6 Sobic.001G332200 cysteine proteinase EP-B 1 precursor, putative, expressed -
7 Sobic.002G282600 copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
8 Sobic.002G106800 expressed protein -
9 Sobic.004G137200 fasciclin-like arabinogalactan precursor protein, putative, expressed -
10 Sobic.006G136700 GPI-anchored protein, putative, expressed -
11 Sobic.001G220800 AGC_AGC_other_NDRh_TRCd.3 - ACG kinases include homologs to PKA, PKG and PKC, expressed K08790: STK38, serine/threonine kinase 38
12 Sobic.003G173800 polygalacturonase, putative, expressed -
13 Sobic.002G417401 - -
14 Sobic.005G010000 expressed protein -
15 Sobic.002G091300 pectinesterase inhibitor domain containing protein, expressed -
16 Sobic.004G025500 - -
17 Sobic.009G116100 conserved hypothetical protein -
18 Sobic.009G098900 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor
19 Sobic.001G024300 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
20 Sobic.002G157900 - -


Gene co-expression network
sample Sobic010G056500 Sobic010G056500 Sobic004G131400 Sobic004G131400 Sobic010G056500--Sobic004G131400 Sobic004G025600 Sobic004G025600 Sobic010G056500--Sobic004G025600 Sobic001G540000 Sobic001G540000 Sobic010G056500--Sobic001G540000 Sobic004G350400 Sobic004G350400 Sobic010G056500--Sobic004G350400 Sobic002G091200 Sobic002G091200 Sobic010G056500--Sobic002G091200 Sobic001G332200 Sobic001G332200 Sobic010G056500--Sobic001G332200 Sobic002G282600 Sobic002G282600 Sobic010G056500--Sobic002G282600 Sobic002G106800 Sobic002G106800 Sobic010G056500--Sobic002G106800 Sobic004G137200 Sobic004G137200 Sobic010G056500--Sobic004G137200 Sobic004G131400--Sobic010G056500 Sobic004G131400--Sobic004G025600 Sobic004G131400--Sobic001G540000 Sobic004G131400--Sobic004G350400 Sobic004G131400--Sobic002G091200 Sobic004G131400--Sobic001G332200 Sobic004G131400--Sobic002G282600 Sobic006G136700 Sobic006G136700 Sobic004G131400--Sobic006G136700 Sobic004G131400--Sobic004G137200 Sobic004G025600--Sobic001G540000 Sobic004G025600--Sobic004G131400 Sobic004G025600--Sobic010G056500 Sobic004G025600--Sobic002G091200 Sobic004G025600--Sobic004G350400 Sobic004G025600--Sobic004G137200 Sobic004G025600--Sobic002G106800 Sobic003G173800 Sobic003G173800 Sobic004G025600--Sobic003G173800 Sobic004G025600--Sobic001G332200 Sobic001G540000--Sobic004G025600 Sobic001G540000--Sobic002G091200 Sobic001G540000--Sobic010G056500 Sobic001G540000--Sobic004G131400 Sobic001G540000--Sobic004G350400 Sobic001G540000--Sobic002G106800 Sobic001G540000--Sobic004G137200 Sobic001G540000--Sobic003G173800 Sobic005G010000 Sobic005G010000 Sobic001G540000--Sobic005G010000 Sobic004G350400--Sobic001G540000 Sobic004G350400--Sobic010G056500 Sobic004G350400--Sobic004G131400 Sobic004G350400--Sobic002G091200 Sobic004G350400--Sobic004G025600 Sobic001G220800 Sobic001G220800 Sobic004G350400--Sobic001G220800 Sobic004G350400--Sobic002G282600 Sobic004G350400--Sobic002G106800 Sobic004G350400--Sobic003G173800 Sobic002G091200--Sobic001G540000 Sobic002G091200--Sobic004G025600 Sobic002G091200--Sobic002G106800 Sobic002G091200--Sobic003G173800 Sobic002G091200--Sobic004G350400 Sobic002G091200--Sobic010G056500 Sobic002G091200--Sobic004G137200 Sobic002G091200--Sobic004G131400 Sobic002G091200--Sobic005G010000 Sobic001G332200--Sobic006G136700 Sobic002G157900 Sobic002G157900 Sobic001G332200--Sobic002G157900 Sobic001G024300 Sobic001G024300 Sobic001G332200--Sobic001G024300 Sobic001G332200--Sobic004G131400 Sobic001G332200--Sobic010G056500 Sobic002G417401 Sobic002G417401 Sobic001G332200--Sobic002G417401 Sobic009G116100 Sobic009G116100 Sobic001G332200--Sobic009G116100 Sobic001G332200--Sobic004G025600 Sobic009G090400 Sobic009G090400 Sobic001G332200--Sobic009G090400 Sobic002G282600--Sobic004G350400 Sobic002G091300 Sobic002G091300 Sobic002G282600--Sobic002G091300 Sobic004G147700 Sobic004G147700 Sobic002G282600--Sobic004G147700 Sobic002G282600--Sobic004G131400 Sobic002G282600--Sobic010G056500 Sobic002G282600--Sobic009G116100 Sobic002G282600--Sobic002G091200 Sobic002G282600--Sobic001G540000 Sobic002G282600--Sobic004G025600 Sobic002G106800--Sobic003G173800 Sobic002G106800--Sobic005G010000 Sobic009G098900 Sobic009G098900 Sobic002G106800--Sobic009G098900 Sobic002G106800--Sobic002G091200 Sobic002G106800--Sobic004G137200 Sobic002G106800--Sobic001G540000 Sobic010G161400 Sobic010G161400 Sobic002G106800--Sobic010G161400 Sobic004G025500 Sobic004G025500 Sobic002G106800--Sobic004G025500 Sobic008G186900 Sobic008G186900 Sobic002G106800--Sobic008G186900 Sobic004G137200--Sobic009G098900 Sobic004G137200--Sobic003G173800 Sobic004G137200--Sobic002G106800 Sobic004G137200--Sobic004G025500 Sobic004G137200--Sobic005G010000 Sobic009G089532 Sobic009G089532 Sobic004G137200--Sobic009G089532 Sobic004G137200--Sobic001G540000 Sobic004G137200--Sobic002G091200 Sobic002G283000 Sobic002G283000 Sobic004G137200--Sobic002G283000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.