Gene annotation
Transcriptome id Sobic.002G279900.1
Synonym BGAL11, Sb02g031260
Functional annotation beta-galactosidase precursor, putative, expressed
UniProt A0A1B6QDU8
Pfam PF02140 PF01301
Panther DB PTHR23421 PTHR23421:SF76
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT2G16730 : glycosyl hydrolase family 35 protein
RAP-DB (Rice) LOC_Os09g36810.1 : beta-galactosidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a006663 , Zm00025a014464 , Zm00025a049321 , Zm00025a019011 , Zm00025a019010 , Zm00025a019012
Brachypodium KQJ91244 , KQK23472
Barley HORVU7Hr1G009630.9 , HORVU7Hr1G009630.8 , HORVU7Hr1G009630.5 , HORVU7Hr1G009630.4 , HORVU7Hr1G009630.7 , HORVU7Hr1G009630.6 , HORVU7Hr1G009630.3 , HORVU7Hr1G009630.2
Wheat TraesCS5B02G331300 , TraesCS5D02G336700 , TraesCS5D02G336700 , TraesCS5A02G330900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G135950 - -
2 Sobic.002G125100 - -
3 Sobic.004G071900 expressed protein -
4 Sobic.006G215500 OsFBX114 - F-box domain containing protein, expressed -
5 Sobic.010G001200 CCT/B-box zinc finger protein, putative, expressed -
6 Sobic.004G099200 kinesin motor domain containing protein, expressed K10406: kinesin family member C2/C3
7 Sobic.001G525600 fringe-related protein, putative, expressed -
8 Sobic.003G313200 expressed protein -
9 Sobic.006G022700 OsFBD9 - F-box and FBD domain containing protein, expressed -
10 Sobic.002G384500 expressed protein -
11 Sobic.009G105100 expressed protein -
12 Sobic.005G145400 RNA recognition motif containing protein, putative, expressed -
13 Sobic.001G529800 phospholipase D, putative, expressed K01115: phospholipase D1/2
14 Sobic.009G098400 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor
15 Sobic.003G420500 Ca ATPase 3(PubMedID : 22196357)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
16 Sobic.004G187400 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
17 Sobic.004G273600 RNA recognition motif containing protein, putative, expressed -
18 Sobic.001G220800 AGC_AGC_other_NDRh_TRCd.3 - ACG kinases include homologs to PKA, PKG and PKC, expressed K08790: STK38, serine/threonine kinase 38
19 Sobic.009G102700 glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1
20 Sobic.005G037700 OsFBX378 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic002G279900 Sobic002G279900 Sobic001G135950 Sobic001G135950 Sobic002G279900--Sobic001G135950 Sobic002G125100 Sobic002G125100 Sobic002G279900--Sobic002G125100 Sobic004G071900 Sobic004G071900 Sobic002G279900--Sobic004G071900 Sobic006G215500 Sobic006G215500 Sobic002G279900--Sobic006G215500 Sobic010G001200 Sobic010G001200 Sobic002G279900--Sobic010G001200 Sobic004G099200 Sobic004G099200 Sobic002G279900--Sobic004G099200 Sobic001G525600 Sobic001G525600 Sobic002G279900--Sobic001G525600 Sobic003G313200 Sobic003G313200 Sobic002G279900--Sobic003G313200 Sobic006G022700 Sobic006G022700 Sobic002G279900--Sobic006G022700 Sobic001G135950--Sobic004G071900 Sobic001G135950--Sobic002G125100 Sobic001G135950--Sobic006G215500 Sobic001G135950--Sobic004G099200 Sobic001G135950--Sobic002G279900 Sobic001G135950--Sobic010G001200 Sobic001G135950--Sobic001G525600 Sobic005G145400 Sobic005G145400 Sobic001G135950--Sobic005G145400 Sobic001G135950--Sobic003G313200 Sobic002G125100--Sobic001G135950 Sobic002G125100--Sobic004G071900 Sobic002G125100--Sobic006G215500 Sobic002G125100--Sobic004G099200 Sobic002G125100--Sobic002G279900 Sobic009G105100 Sobic009G105100 Sobic002G125100--Sobic009G105100 Sobic002G125100--Sobic010G001200 Sobic002G125100--Sobic001G525600 Sobic002G125100--Sobic003G313200 Sobic004G071900--Sobic006G215500 Sobic004G071900--Sobic001G135950 Sobic004G071900--Sobic002G125100 Sobic004G071900--Sobic004G099200 Sobic004G071900--Sobic009G105100 Sobic009G102700 Sobic009G102700 Sobic004G071900--Sobic009G102700 Sobic004G071900--Sobic003G313200 Sobic004G071900--Sobic006G022700 Sobic004G071900--Sobic002G279900 Sobic006G215500--Sobic004G071900 Sobic006G215500--Sobic001G135950 Sobic006G215500--Sobic006G022700 Sobic006G215500--Sobic002G125100 Sobic006G215500--Sobic003G313200 Sobic001G220800 Sobic001G220800 Sobic006G215500--Sobic001G220800 Sobic004G025500 Sobic004G025500 Sobic006G215500--Sobic004G025500 Sobic006G215500--Sobic009G102700 Sobic006G215500--Sobic004G099200 Sobic010G001200--Sobic001G135950 Sobic010G001200--Sobic002G279900 Sobic010G001200--Sobic004G099200 Sobic010G001200--Sobic004G071900 Sobic010G001200--Sobic002G125100 Sobic010G001200--Sobic001G525600 Sobic010G001200--Sobic005G145400 Sobic010G001200--Sobic006G215500 Sobic003G420500 Sobic003G420500 Sobic010G001200--Sobic003G420500 Sobic004G099200--Sobic001G135950 Sobic004G099200--Sobic001G525600 Sobic004G099200--Sobic004G071900 Sobic004G099200--Sobic005G145400 Sobic004G099200--Sobic002G125100 Sobic004G099200--Sobic006G215500 Sobic004G099200--Sobic003G313200 Sobic010G276100 Sobic010G276100 Sobic004G099200--Sobic010G276100 Sobic004G099200--Sobic002G279900 Sobic001G525600--Sobic004G099200 Sobic001G525600--Sobic001G135950 Sobic001G525600--Sobic005G145400 Sobic001G525600--Sobic003G313200 Sobic001G525600--Sobic003G420500 Sobic001G525600--Sobic004G071900 Sobic001G525600--Sobic002G279900 Sobic001G525600--Sobic002G125100 Sobic001G525600--Sobic006G215500 Sobic003G313200--Sobic006G215500 Sobic003G313200--Sobic004G071900 Sobic003G313200--Sobic004G099200 Sobic003G313200--Sobic001G135950 Sobic003G313200--Sobic001G525600 Sobic003G313200--Sobic006G022700 Sobic003G313200--Sobic002G279900 Sobic003G313200--Sobic002G125100 Sobic003G313200--Sobic009G105100 Sobic006G022700--Sobic006G215500 Sobic006G022700--Sobic001G220800 Sobic006G022700--Sobic004G071900 Sobic009G098400 Sobic009G098400 Sobic006G022700--Sobic009G098400 Sobic006G022700--Sobic003G313200 Sobic004G350400 Sobic004G350400 Sobic006G022700--Sobic004G350400 Sobic006G022700--Sobic002G279900 Sobic004G187400 Sobic004G187400 Sobic006G022700--Sobic004G187400 Sobic006G022700--Sobic001G135950
Octagon: transcription factors


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