Gene annotation
Transcriptome id Sobic.001G529800.1
Synonym PLDBETA, Sb01g049290, PLDBETA1
Functional annotation phospholipase D, putative, expressed
UniProt A0A1B6QQY3
Pfam PF00614 PF00168 PF12357
Panther DB PTHR18896 PTHR18896:SF61
NCBI CDD -
KEGG Orthology K01115; phospholipase D1/2
Gene Ontology GO:0003824; catalytic activity GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT2G42010 : phospholipase D beta 1
RAP-DB (Rice) LOC_Os03g02740.1 : phospholipase D, putative, expressed
MaizeGDB (Corn) Zm00025a018971 , Zm00025a031217 , Zm00025a019624 , Zm00025a000257
Brachypodium KQK23957
Barley HORVU3Hr1G024530.7 , HORVU3Hr1G024530.6 , HORVU3Hr1G024530.5 , HORVU3Hr1G024530.3 , HORVU3Hr1G024530.2 , HORVU3Hr1G024530.1 , HORVU3Hr1G024530.9 , HORVU3Hr1G024530.8 , HORVU3Hr1G024530.11 , HORVU3Hr1G024530.10 , HORVU4Hr1G085550.4 , HORVU4Hr1G085550.3 , HORVU4Hr1G085550.2 , HORVU4Hr1G085550.1
Wheat TraesCS5A02G520900 , TraesCS4D02G346700 , TraesCS3B02G149100
Populus PNT53921 , PNT53922


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G525600 fringe-related protein, putative, expressed -
2 Sobic.003G313200 expressed protein -
3 Sobic.006G022700 OsFBD9 - F-box and FBD domain containing protein, expressed -
4 Sobic.002G279900 beta-galactosidase precursor, putative, expressed -
5 Sobic.006G215500 OsFBX114 - F-box domain containing protein, expressed -
6 Sobic.004G099200 kinesin motor domain containing protein, expressed K10406: kinesin family member C2/C3
7 Sobic.004G071900 expressed protein -
8 Sobic.001G135950 - -
9 Sobic.002G125100 - -
10 Sobic.003G405800 CBS domain containing membrane protein, putative, expressed -
11 Sobic.009G105100 expressed protein -
12 Sobic.010G230200 myb-like DNA-binding domain containing protein, expressed K09422: transcription factor MYB, plant
13 Sobic.006G071096 - -
14 Sobic.001G220800 AGC_AGC_other_NDRh_TRCd.3 - ACG kinases include homologs to PKA, PKG and PKC, expressed K08790: STK38, serine/threonine kinase 38
15 Sobic.010G001200 CCT/B-box zinc finger protein, putative, expressed -
16 Sobic.009G177300 monocopper oxidase, putative, expressed -
17 Sobic.009G216400 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
18 Sobic.003G027300 RALFL17 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
19 Sobic.009G087200 AGC_PVPK_like_kin82y.12 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
20 Sobic.002G197900 - -


Gene co-expression network
sample Sobic001G529800 Sobic001G529800 Sobic001G525600 Sobic001G525600 Sobic001G529800--Sobic001G525600 Sobic003G313200 Sobic003G313200 Sobic001G529800--Sobic003G313200 Sobic006G022700 Sobic006G022700 Sobic001G529800--Sobic006G022700 Sobic002G279900 Sobic002G279900 Sobic001G529800--Sobic002G279900 Sobic006G215500 Sobic006G215500 Sobic001G529800--Sobic006G215500 Sobic004G099200 Sobic004G099200 Sobic001G529800--Sobic004G099200 Sobic004G071900 Sobic004G071900 Sobic001G529800--Sobic004G071900 Sobic001G135950 Sobic001G135950 Sobic001G529800--Sobic001G135950 Sobic002G125100 Sobic002G125100 Sobic001G529800--Sobic002G125100 Sobic001G525600--Sobic004G099200 Sobic001G525600--Sobic001G135950 Sobic005G145400 Sobic005G145400 Sobic001G525600--Sobic005G145400 Sobic001G525600--Sobic003G313200 Sobic003G420500 Sobic003G420500 Sobic001G525600--Sobic003G420500 Sobic001G525600--Sobic004G071900 Sobic001G525600--Sobic002G279900 Sobic001G525600--Sobic002G125100 Sobic001G525600--Sobic006G215500 Sobic003G313200--Sobic006G215500 Sobic003G313200--Sobic004G071900 Sobic003G313200--Sobic004G099200 Sobic003G313200--Sobic001G135950 Sobic003G313200--Sobic001G525600 Sobic003G313200--Sobic006G022700 Sobic003G313200--Sobic002G279900 Sobic003G313200--Sobic002G125100 Sobic009G105100 Sobic009G105100 Sobic003G313200--Sobic009G105100 Sobic006G022700--Sobic006G215500 Sobic001G220800 Sobic001G220800 Sobic006G022700--Sobic001G220800 Sobic006G022700--Sobic004G071900 Sobic009G098400 Sobic009G098400 Sobic006G022700--Sobic009G098400 Sobic006G022700--Sobic003G313200 Sobic004G350400 Sobic004G350400 Sobic006G022700--Sobic004G350400 Sobic006G022700--Sobic002G279900 Sobic004G187400 Sobic004G187400 Sobic006G022700--Sobic004G187400 Sobic006G022700--Sobic001G135950 Sobic002G279900--Sobic001G135950 Sobic002G279900--Sobic002G125100 Sobic002G279900--Sobic004G071900 Sobic002G279900--Sobic006G215500 Sobic010G001200 Sobic010G001200 Sobic002G279900--Sobic010G001200 Sobic002G279900--Sobic004G099200 Sobic002G279900--Sobic001G525600 Sobic002G279900--Sobic003G313200 Sobic002G279900--Sobic006G022700 Sobic006G215500--Sobic004G071900 Sobic006G215500--Sobic001G135950 Sobic006G215500--Sobic006G022700 Sobic006G215500--Sobic002G125100 Sobic006G215500--Sobic003G313200 Sobic006G215500--Sobic001G220800 Sobic004G025500 Sobic004G025500 Sobic006G215500--Sobic004G025500 Sobic009G102700 Sobic009G102700 Sobic006G215500--Sobic009G102700 Sobic006G215500--Sobic004G099200 Sobic004G099200--Sobic001G135950 Sobic004G099200--Sobic001G525600 Sobic004G099200--Sobic004G071900 Sobic004G099200--Sobic005G145400 Sobic004G099200--Sobic002G125100 Sobic004G099200--Sobic006G215500 Sobic004G099200--Sobic003G313200 Sobic010G276100 Sobic010G276100 Sobic004G099200--Sobic010G276100 Sobic004G099200--Sobic002G279900 Sobic004G071900--Sobic006G215500 Sobic004G071900--Sobic001G135950 Sobic004G071900--Sobic002G125100 Sobic004G071900--Sobic004G099200 Sobic004G071900--Sobic009G105100 Sobic004G071900--Sobic009G102700 Sobic004G071900--Sobic003G313200 Sobic004G071900--Sobic006G022700 Sobic004G071900--Sobic002G279900 Sobic001G135950--Sobic004G071900 Sobic001G135950--Sobic002G125100 Sobic001G135950--Sobic006G215500 Sobic001G135950--Sobic004G099200 Sobic001G135950--Sobic002G279900 Sobic001G135950--Sobic010G001200 Sobic001G135950--Sobic001G525600 Sobic001G135950--Sobic005G145400 Sobic001G135950--Sobic003G313200 Sobic002G125100--Sobic001G135950 Sobic002G125100--Sobic004G071900 Sobic002G125100--Sobic006G215500 Sobic002G125100--Sobic004G099200 Sobic002G125100--Sobic002G279900 Sobic002G125100--Sobic009G105100 Sobic002G125100--Sobic010G001200 Sobic002G125100--Sobic001G525600 Sobic002G125100--Sobic003G313200
Octagon: transcription factors


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