Gene annotation
Transcriptome id Sobic.009G177300.1
Synonym Sb09g023770, sks11
Functional annotation monocopper oxidase, putative, expressed
UniProt C5YZW1
Pfam PF07731 PF07732 PF00394
Panther DB PTHR11709 PTHR11709:SF76
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity GO:0005507copper ion binding


Orthologs (automatic annotation)
TAIR AT3G13400 : SKU5 similar 13
RAP-DB (Rice) LOC_Os05g40740.1 : monocopper oxidase, putative, expressed
MaizeGDB (Corn) Zm00025a037803 , Zm00025a044043 , Zm00025a006379 , Zm00025a027087 , Zm00025a039788
Brachypodium KQK10313 , KQJ94623 , KQK05703
Barley HORVU1Hr1G069130.3 , HORVU1Hr1G069130.1 , HORVU3Hr1G080360.4 , HORVU3Hr1G080360.1 , HORVU3Hr1G080360.2 , HORVU3Hr1G080360.3 , HORVU2Hr1G062590.3 , HORVU2Hr1G062590.1 , HORVU2Hr1G062590.6 , HORVU2Hr1G062590.4 , HORVU2Hr1G062590.5 , HORVU2Hr1G062590.8 , HORVU2Hr1G062590.9 , HORVU2Hr1G062590.10 , HORVU1Hr1G046690.10 , HORVU1Hr1G046690.8 , HORVU1Hr1G046690.9 , HORVU1Hr1G046690.4 , HORVU1Hr1G046690.5 , HORVU1Hr1G046690.6 , HORVU1Hr1G046690.7 , HORVU1Hr1G046690.1 , HORVU1Hr1G046690.2 , HORVU1Hr1G046690.3 , HORVU3Hr1G033220.3 , HORVU3Hr1G033220.2 , HORVU3Hr1G033220.1
Wheat TraesCS3B02G371800 , TraesCS1A02G176000 , TraesCS3B02G195700 , TraesCS2D02G259100 , TraesCS3D02G333700 , TraesCS1A02G304100 , TraesCS1B02G314600 , TraesCS3A02G340200 , TraesCS1B02G204100 , TraesCS3D02G171100 , TraesCS1D02G162800 , TraesCS1D02G303600
Populus -


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cDNA sequences
Sobic.009G177300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G351500 pollen allergen Cyn d 23, putative, expressed -
2 Sobic.009G216400 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
3 Sobic.006G071096 - -
4 Sobic.004G294200 ZOS2-13 - C2H2 zinc finger protein, expressed -
5 Sobic.003G178000 pectinesterase, putative, expressed -
6 Sobic.002G066100 - -
7 Sobic.003G061700 - -
8 Sobic.007G100800 CSLD3 - cellulose synthase-like family D, expressed -
9 Sobic.008G186900 SCP-like extracellular protein, expressed -
10 Sobic.001G473700 OsSCP11 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
11 Sobic.003G438500 THION25 - Plant thionin family protein precursor, expressed -
12 Sobic.002G197900 - -
13 Sobic.005G010000 expressed protein -
14 Sobic.009G087200 AGC_PVPK_like_kin82y.12 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
15 Sobic.003G164700 C2 domain containing protein, putative, expressed -
16 Sobic.003G127200 phosphatidylinositol kinase, putative, expressed -
17 Sobic.010G161400 polygalacturonase, putative, expressed K01213: galacturan 1,4-alpha-galacturonidase
18 Sobic.004G147700 pectinesterase inhibitor domain containing protein, putative, expressed -
19 Sobic.003G027300 RALFL17 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
20 Sobic.003G173800 polygalacturonase, putative, expressed -


Gene co-expression network
sample Sobic009G177300 Sobic009G177300 Sobic002G351500 Sobic002G351500 Sobic009G177300--Sobic002G351500 Sobic009G216400 Sobic009G216400 Sobic009G177300--Sobic009G216400 Sobic006G071096 Sobic006G071096 Sobic009G177300--Sobic006G071096 Sobic004G294200 Sobic004G294200 Sobic009G177300--Sobic004G294200 Sobic003G178000 Sobic003G178000 Sobic009G177300--Sobic003G178000 Sobic002G066100 Sobic002G066100 Sobic009G177300--Sobic002G066100 Sobic003G061700 Sobic003G061700 Sobic009G177300--Sobic003G061700 Sobic007G100800 Sobic007G100800 Sobic009G177300--Sobic007G100800 Sobic008G186900 Sobic008G186900 Sobic009G177300--Sobic008G186900 Sobic002G351500--Sobic009G177300 Sobic002G351500--Sobic003G061700 Sobic002G351500--Sobic007G100800 Sobic002G351500--Sobic009G216400 Sobic002G351500--Sobic008G186900 Sobic002G351500--Sobic003G178000 Sobic005G010000 Sobic005G010000 Sobic002G351500--Sobic005G010000 Sobic002G351500--Sobic004G294200 Sobic003G438500 Sobic003G438500 Sobic002G351500--Sobic003G438500 Sobic009G216400--Sobic009G177300 Sobic009G216400--Sobic002G351500 Sobic009G216400--Sobic008G186900 Sobic009G216400--Sobic003G061700 Sobic009G216400--Sobic007G100800 Sobic009G216400--Sobic003G438500 Sobic009G216400--Sobic005G010000 Sobic009G216400--Sobic003G178000 Sobic010G161400 Sobic010G161400 Sobic009G216400--Sobic010G161400 Sobic001G473700 Sobic001G473700 Sobic006G071096--Sobic001G473700 Sobic006G071096--Sobic009G177300 Sobic003G027300 Sobic003G027300 Sobic006G071096--Sobic003G027300 Sobic009G087200 Sobic009G087200 Sobic006G071096--Sobic009G087200 Sobic006G071096--Sobic009G216400 Sobic004G318300 Sobic004G318300 Sobic006G071096--Sobic004G318300 Sobic006G071096--Sobic002G351500 Sobic010G230200 Sobic010G230200 Sobic006G071096--Sobic010G230200 Sobic006G071096--Sobic002G066100 Sobic003G164700 Sobic003G164700 Sobic004G294200--Sobic003G164700 Sobic002G197900 Sobic002G197900 Sobic004G294200--Sobic002G197900 Sobic004G294200--Sobic002G066100 Sobic004G294200--Sobic002G351500 Sobic004G294200--Sobic003G178000 Sobic004G294200--Sobic009G177300 Sobic001G228000 Sobic001G228000 Sobic004G294200--Sobic001G228000 Sobic008G124301 Sobic008G124301 Sobic004G294200--Sobic008G124301 Sobic006G237700 Sobic006G237700 Sobic004G294200--Sobic006G237700 Sobic003G178000--Sobic002G351500 Sobic003G178000--Sobic003G061700 Sobic003G178000--Sobic008G186900 Sobic003G178000--Sobic007G100800 Sobic003G127200 Sobic003G127200 Sobic003G178000--Sobic003G127200 Sobic003G178000--Sobic004G294200 Sobic003G178000--Sobic003G164700 Sobic003G178000--Sobic009G216400 Sobic003G178000--Sobic009G177300 Sobic002G066100--Sobic004G294200 Sobic002G066100--Sobic009G177300 Sobic002G066100--Sobic003G164700 Sobic002G066100--Sobic008G124301 Sobic002G066100--Sobic002G351500 Sobic002G066100--Sobic002G197900 Sobic002G066100--Sobic009G216400 Sobic002G066100--Sobic003G178000 Sobic002G066100--Sobic006G071096 Sobic003G061700--Sobic007G100800 Sobic003G061700--Sobic008G186900 Sobic003G061700--Sobic005G010000 Sobic003G061700--Sobic010G161400 Sobic003G173800 Sobic003G173800 Sobic003G061700--Sobic003G173800 Sobic003G061700--Sobic003G127200 Sobic002G002600 Sobic002G002600 Sobic003G061700--Sobic002G002600 Sobic003G061700--Sobic002G351500 Sobic009G098900 Sobic009G098900 Sobic003G061700--Sobic009G098900 Sobic007G100800--Sobic003G061700 Sobic007G100800--Sobic008G186900 Sobic007G100800--Sobic005G010000 Sobic007G100800--Sobic010G161400 Sobic007G100800--Sobic003G127200 Sobic007G100800--Sobic003G173800 Sobic007G100800--Sobic002G002600 Sobic007G100800--Sobic009G098900 Sobic008G028300 Sobic008G028300 Sobic007G100800--Sobic008G028300 Sobic008G186900--Sobic007G100800 Sobic008G186900--Sobic010G161400 Sobic008G186900--Sobic003G061700 Sobic008G186900--Sobic005G010000 Sobic008G186900--Sobic003G173800 Sobic008G186900--Sobic002G002600 Sobic008G186900--Sobic003G127200 Sobic008G186900--Sobic009G098900 Sobic008G186900--Sobic008G028300
Octagon: transcription factors


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