Gene annotation
Transcriptome id Sobic.001G473700.1
Synonym scpl40, Sb01g044390
Functional annotation OsSCP11 - Putative Serine Carboxypeptidase homologue, expressed
UniProt C5WUS1
Pfam PF00450
Panther DB PTHR11802 PTHR11802:SF83
NCBI CDD KOG1282; Serine carboxypeptidases (lysosomal cathepsin A)
KEGG Orthology K16297; serine carboxypeptidase-like clade II
Gene Ontology GO:0006508; proteolysis GO:0004185serine-type carboxypeptidase activity


Orthologs (automatic annotation)
TAIR AT3G63470 : serine carboxypeptidase-like 40
RAP-DB (Rice) LOC_Os03g09190.1 : OsSCP11 - Putative Serine Carboxypeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a001074
Brachypodium KQJ90550
Barley -
Wheat TraesCS1D02G087600 , TraesCS4A02G035200 , TraesCS3B02G155800 , TraesCS1A02G086100 , TraesCS1A02G086100
Populus -


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cDNA sequences
Sobic.001G473700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G071096 - -
2 Sobic.009G087200 AGC_PVPK_like_kin82y.12 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
3 Sobic.003G027300 RALFL17 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
4 Sobic.009G177300 monocopper oxidase, putative, expressed -
5 Sobic.004G318300 endoglucanase, putative, expressed K01179: endoglucanase
6 Sobic.009G216400 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
7 Sobic.010G230200 myb-like DNA-binding domain containing protein, expressed K09422: transcription factor MYB, plant
8 Sobic.002G351500 pollen allergen Cyn d 23, putative, expressed -
9 Sobic.006G219700 nitrate-induced NOI protein, expressed -
10 Sobic.009G259600 aspartyl protease family protein, putative, expressed -
11 Sobic.002G066100 - -
12 Sobic.005G031700 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
13 Sobic.004G147700 pectinesterase inhibitor domain containing protein, putative, expressed -
14 Sobic.008G043400 - -
15 Sobic.004G294200 ZOS2-13 - C2H2 zinc finger protein, expressed -
16 Sobic.010G187700 GRAM and C2 domains containing protein, putative, expressed -
17 Sobic.001G511100 expressed protein -
18 Sobic.003G178000 pectinesterase, putative, expressed -
19 Sobic.003G145300 expressed protein -
20 Sobic.002G282600 copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase


Gene co-expression network
sample Sobic001G473700 Sobic001G473700 Sobic006G071096 Sobic006G071096 Sobic001G473700--Sobic006G071096 Sobic009G087200 Sobic009G087200 Sobic001G473700--Sobic009G087200 Sobic003G027300 Sobic003G027300 Sobic001G473700--Sobic003G027300 Sobic009G177300 Sobic009G177300 Sobic001G473700--Sobic009G177300 Sobic004G318300 Sobic004G318300 Sobic001G473700--Sobic004G318300 Sobic009G216400 Sobic009G216400 Sobic001G473700--Sobic009G216400 Sobic010G230200 Sobic010G230200 Sobic001G473700--Sobic010G230200 Sobic002G351500 Sobic002G351500 Sobic001G473700--Sobic002G351500 Sobic006G219700 Sobic006G219700 Sobic001G473700--Sobic006G219700 Sobic006G071096--Sobic001G473700 Sobic006G071096--Sobic009G177300 Sobic006G071096--Sobic003G027300 Sobic006G071096--Sobic009G087200 Sobic006G071096--Sobic009G216400 Sobic006G071096--Sobic004G318300 Sobic006G071096--Sobic002G351500 Sobic006G071096--Sobic010G230200 Sobic002G066100 Sobic002G066100 Sobic006G071096--Sobic002G066100 Sobic009G087200--Sobic003G027300 Sobic009G087200--Sobic004G318300 Sobic009G087200--Sobic001G473700 Sobic009G087200--Sobic010G230200 Sobic009G087200--Sobic006G071096 Sobic005G031700 Sobic005G031700 Sobic009G087200--Sobic005G031700 Sobic009G087200--Sobic009G177300 Sobic008G043400 Sobic008G043400 Sobic009G087200--Sobic008G043400 Sobic009G087200--Sobic009G216400 Sobic003G027300--Sobic004G318300 Sobic003G027300--Sobic010G230200 Sobic003G027300--Sobic009G087200 Sobic003G027300--Sobic008G043400 Sobic003G027300--Sobic005G031700 Sobic003G027300--Sobic006G071096 Sobic001G511100 Sobic001G511100 Sobic003G027300--Sobic001G511100 Sobic009G259600 Sobic009G259600 Sobic003G027300--Sobic009G259600 Sobic003G027300--Sobic006G219700 Sobic009G177300--Sobic002G351500 Sobic009G177300--Sobic009G216400 Sobic009G177300--Sobic006G071096 Sobic004G294200 Sobic004G294200 Sobic009G177300--Sobic004G294200 Sobic003G178000 Sobic003G178000 Sobic009G177300--Sobic003G178000 Sobic009G177300--Sobic002G066100 Sobic003G061700 Sobic003G061700 Sobic009G177300--Sobic003G061700 Sobic007G100800 Sobic007G100800 Sobic009G177300--Sobic007G100800 Sobic008G186900 Sobic008G186900 Sobic009G177300--Sobic008G186900 Sobic004G318300--Sobic003G027300 Sobic004G318300--Sobic010G230200 Sobic004G318300--Sobic009G087200 Sobic004G318300--Sobic008G043400 Sobic004G318300--Sobic009G259600 Sobic004G318300--Sobic006G219700 Sobic004G318300--Sobic005G031700 Sobic004G318300--Sobic001G511100 Sobic003G197500 Sobic003G197500 Sobic004G318300--Sobic003G197500 Sobic009G216400--Sobic009G177300 Sobic009G216400--Sobic002G351500 Sobic009G216400--Sobic008G186900 Sobic009G216400--Sobic003G061700 Sobic009G216400--Sobic007G100800 Sobic003G438500 Sobic003G438500 Sobic009G216400--Sobic003G438500 Sobic005G010000 Sobic005G010000 Sobic009G216400--Sobic005G010000 Sobic009G216400--Sobic003G178000 Sobic010G161400 Sobic010G161400 Sobic009G216400--Sobic010G161400 Sobic010G230200--Sobic003G027300 Sobic010G230200--Sobic005G031700 Sobic010G230200--Sobic004G318300 Sobic010G230200--Sobic008G043400 Sobic010G230200--Sobic001G511100 Sobic010G230200--Sobic009G087200 Sobic004G147700 Sobic004G147700 Sobic010G230200--Sobic004G147700 Sobic010G230200--Sobic003G197500 Sobic003G114900 Sobic003G114900 Sobic010G230200--Sobic003G114900 Sobic002G351500--Sobic009G177300 Sobic002G351500--Sobic003G061700 Sobic002G351500--Sobic007G100800 Sobic002G351500--Sobic009G216400 Sobic002G351500--Sobic008G186900 Sobic002G351500--Sobic003G178000 Sobic002G351500--Sobic005G010000 Sobic002G351500--Sobic004G294200 Sobic002G351500--Sobic003G438500 Sobic006G219700--Sobic009G259600 Sobic002G395100 Sobic002G395100 Sobic006G219700--Sobic002G395100 Sobic006G219700--Sobic004G318300 Sobic006G219700--Sobic008G043400 Sobic006G219700--Sobic003G027300 Sobic001G400400 Sobic001G400400 Sobic006G219700--Sobic001G400400 Sobic006G219700--Sobic003G197500 Sobic006G219700--Sobic010G230200 Sobic006G219700--Sobic009G087200
Octagon: transcription factors


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