Gene annotation
Transcriptome id Sobic.004G318300.1
Synonym Sb04g034920, GH9A4, AtGH9A4
Functional annotation endoglucanase, putative, expressed
UniProt C5XTL8
Pfam PF00759
Panther DB PTHR22298 PTHR22298:SF31
NCBI CDD -
KEGG Orthology K01179; endoglucanase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT3G43860 : glycosyl hydrolase 9A4
RAP-DB (Rice) LOC_Os02g53820.2 : endoglucanase, putative, expressed
MaizeGDB (Corn) Zm00025a040249 , Zm00025a057514 , Zm00025a022345 , Zm00025a047771 , Zm00025a035938
Brachypodium KQK03329 , KQK01627 , KQJ98076 , PNT65007 , KQJ98077 , KQK20451 , PNT64837 , KQJ98284
Barley HORVU5Hr1G060140.5 , HORVU5Hr1G060140.1 , HORVU3Hr1G029470.1 , HORVU3Hr1G029470.3 , HORVU3Hr1G029470.2 , HORVU3Hr1G029470.5 , HORVU3Hr1G029470.4 , HORVU3Hr1G029470.7 , HORVU3Hr1G029470.6 , HORVU3Hr1G029470.9 , HORVU3Hr1G029470.8 , HORVU6Hr1G081500.1 , HORVU6Hr1G081500.2 , HORVU1Hr1G019520.6 , HORVU1Hr1G019520.4 , HORVU1Hr1G019520.5 , HORVU1Hr1G019520.2 , HORVU1Hr1G019520.3 , HORVU1Hr1G019520.1 , HORVU5Hr1G081200.5 , HORVU5Hr1G081200.2 , HORVU5Hr1G081200.3 , HORVU5Hr1G081200.9
Wheat TraesCS5A02G317400 , TraesCS3D02G153400 , TraesCS1B02G107700 , TraesCS2D02G351300 , TraesCS2D02G351300 , TraesCS2D02G351300 , TraesCS6B02G368000 , TraesCS7D02G146000 , TraesCS1A02G360700 , TraesCS2B02G370600 , TraesCS2B02G370600 , TraesCS5B02G169500 , TraesCS7A02G144700 , TraesCS1B02G377100 , TraesCS5A02G202600 , TraesCS1A02G088700 , TraesCS3A02G144600 , TraesCS7B02G046900 , TraesCS6A02G337300 , TraesCS5B02G318000 , TraesCS1D02G090100 , TraesCS1A02G360700 , TraesCS1A02G360700 , TraesCS1D02G365100 , TraesCS6D02G318100 , TraesCS5D02G323700 , TraesCS5D02G323700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G027300 RALFL17 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
2 Sobic.010G230200 myb-like DNA-binding domain containing protein, expressed K09422: transcription factor MYB, plant
3 Sobic.009G087200 AGC_PVPK_like_kin82y.12 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
4 Sobic.008G043400 - -
5 Sobic.009G259600 aspartyl protease family protein, putative, expressed -
6 Sobic.006G219700 nitrate-induced NOI protein, expressed -
7 Sobic.005G031700 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
8 Sobic.001G511100 expressed protein -
9 Sobic.003G197500 protein kinase domain containing protein, putative, expressed -
10 Sobic.006G071096 - -
11 Sobic.001G473700 OsSCP11 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
12 Sobic.002G395100 DEF8 - Defensin and Defensin-like DEFL family, expressed -
13 Sobic.005G044600 pyridine nucleotide-disulphide oxidoreductase family protein, putative, expressed -
14 Sobic.004G147700 pectinesterase inhibitor domain containing protein, putative, expressed -
15 Sobic.003G114900 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
16 Sobic.002G091300 pectinesterase inhibitor domain containing protein, expressed -
17 Sobic.002G282600 copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
18 Sobic.009G216400 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
19 Sobic.009G116100 conserved hypothetical protein -
20 Sobic.009G177300 monocopper oxidase, putative, expressed -


Gene co-expression network
sample Sobic004G318300 Sobic004G318300 Sobic003G027300 Sobic003G027300 Sobic004G318300--Sobic003G027300 Sobic010G230200 Sobic010G230200 Sobic004G318300--Sobic010G230200 Sobic009G087200 Sobic009G087200 Sobic004G318300--Sobic009G087200 Sobic008G043400 Sobic008G043400 Sobic004G318300--Sobic008G043400 Sobic009G259600 Sobic009G259600 Sobic004G318300--Sobic009G259600 Sobic006G219700 Sobic006G219700 Sobic004G318300--Sobic006G219700 Sobic005G031700 Sobic005G031700 Sobic004G318300--Sobic005G031700 Sobic001G511100 Sobic001G511100 Sobic004G318300--Sobic001G511100 Sobic003G197500 Sobic003G197500 Sobic004G318300--Sobic003G197500 Sobic003G027300--Sobic004G318300 Sobic003G027300--Sobic010G230200 Sobic003G027300--Sobic009G087200 Sobic003G027300--Sobic008G043400 Sobic003G027300--Sobic005G031700 Sobic006G071096 Sobic006G071096 Sobic003G027300--Sobic006G071096 Sobic003G027300--Sobic001G511100 Sobic003G027300--Sobic009G259600 Sobic003G027300--Sobic006G219700 Sobic010G230200--Sobic003G027300 Sobic010G230200--Sobic005G031700 Sobic010G230200--Sobic004G318300 Sobic010G230200--Sobic008G043400 Sobic010G230200--Sobic001G511100 Sobic010G230200--Sobic009G087200 Sobic004G147700 Sobic004G147700 Sobic010G230200--Sobic004G147700 Sobic010G230200--Sobic003G197500 Sobic003G114900 Sobic003G114900 Sobic010G230200--Sobic003G114900 Sobic009G087200--Sobic003G027300 Sobic009G087200--Sobic004G318300 Sobic001G473700 Sobic001G473700 Sobic009G087200--Sobic001G473700 Sobic009G087200--Sobic010G230200 Sobic009G087200--Sobic006G071096 Sobic009G087200--Sobic005G031700 Sobic009G177300 Sobic009G177300 Sobic009G087200--Sobic009G177300 Sobic009G087200--Sobic008G043400 Sobic009G216400 Sobic009G216400 Sobic009G087200--Sobic009G216400 Sobic008G043400--Sobic003G197500 Sobic008G043400--Sobic001G511100 Sobic008G043400--Sobic010G230200 Sobic008G043400--Sobic004G318300 Sobic008G043400--Sobic005G031700 Sobic008G043400--Sobic003G114900 Sobic008G043400--Sobic003G027300 Sobic002G395100 Sobic002G395100 Sobic008G043400--Sobic002G395100 Sobic008G043400--Sobic006G219700 Sobic009G259600--Sobic006G219700 Sobic009G259600--Sobic004G318300 Sobic009G259600--Sobic008G043400 Sobic009G259600--Sobic003G027300 Sobic009G259600--Sobic002G395100 Sobic009G259600--Sobic003G197500 Sobic001G400400 Sobic001G400400 Sobic009G259600--Sobic001G400400 Sobic009G259600--Sobic010G230200 Sobic009G259600--Sobic009G087200 Sobic006G219700--Sobic009G259600 Sobic006G219700--Sobic002G395100 Sobic006G219700--Sobic004G318300 Sobic006G219700--Sobic008G043400 Sobic006G219700--Sobic003G027300 Sobic006G219700--Sobic001G400400 Sobic006G219700--Sobic003G197500 Sobic006G219700--Sobic010G230200 Sobic006G219700--Sobic009G087200 Sobic005G031700--Sobic010G230200 Sobic005G031700--Sobic001G511100 Sobic005G031700--Sobic008G043400 Sobic005G031700--Sobic003G027300 Sobic005G031700--Sobic004G147700 Sobic009G116100 Sobic009G116100 Sobic005G031700--Sobic009G116100 Sobic005G031700--Sobic004G318300 Sobic002G091300 Sobic002G091300 Sobic005G031700--Sobic002G091300 Sobic002G282600 Sobic002G282600 Sobic005G031700--Sobic002G282600 Sobic001G511100--Sobic008G043400 Sobic001G511100--Sobic010G230200 Sobic001G511100--Sobic005G031700 Sobic001G511100--Sobic003G197500 Sobic001G511100--Sobic003G114900 Sobic001G511100--Sobic009G116100 Sobic003G009600 Sobic003G009600 Sobic001G511100--Sobic003G009600 Sobic002G427500 Sobic002G427500 Sobic001G511100--Sobic002G427500 Sobic001G511100--Sobic004G318300 Sobic003G197500--Sobic008G043400 Sobic003G197500--Sobic003G114900 Sobic003G197500--Sobic001G511100 Sobic003G197500--Sobic002G427500 Sobic006G127800 Sobic006G127800 Sobic003G197500--Sobic006G127800 Sobic003G197500--Sobic002G395100 Sobic003G197500--Sobic010G230200 Sobic006G270800 Sobic006G270800 Sobic003G197500--Sobic006G270800 Sobic003G197500--Sobic005G031700
Octagon: transcription factors


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