Gene annotation
Transcriptome id Sobic.002G395100.2
Synonym LCR66, PDF2.4
Functional annotation DEF8 - Defensin and Defensin-like DEFL family, expressed
UniProt A0A1W0W7P4
Pfam PF00304
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G61070 : low-molecular-weight cysteine-rich 66
RAP-DB (Rice) LOC_Os02g41904.1 : DEF7 - Defensin and Defensin-like DEFL family, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G219700 nitrate-induced NOI protein, expressed -
2 Sobic.001G400400 pectinesterase, putative, expressed K01051: pectinesterase
3 Sobic.003G197500 protein kinase domain containing protein, putative, expressed -
4 Sobic.008G043400 - -
5 Sobic.009G259600 aspartyl protease family protein, putative, expressed -
6 Sobic.010G034200 pectate lyase precursor, putative, expressed K01728: pectate lyase
7 Sobic.004G318300 endoglucanase, putative, expressed K01179: endoglucanase
8 Sobic.003G027300 RALFL17 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
9 Sobic.010G230200 myb-like DNA-binding domain containing protein, expressed K09422: transcription factor MYB, plant
10 Sobic.001G511100 expressed protein -
11 Sobic.003G114900 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
12 Sobic.009G227500 aspartyl protease family protein, putative, expressed -
13 Sobic.005G031700 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
14 Sobic.005G044600 pyridine nucleotide-disulphide oxidoreductase family protein, putative, expressed -
15 Sobic.002G427500 pectinesterase, putative, expressed K01051: pectinesterase
16 Sobic.009G253700 phosphatidylinositol 3- and 4-kinase family protein, putative, expressed -
17 Sobic.009G087200 AGC_PVPK_like_kin82y.12 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
18 Sobic.006G127800 armadillo/beta-catenin repeat family protein, putative, expressed -
19 Sobic.006G234400 DUF617 domain containing protein, expressed -
20 Sobic.009G089000 ATCHX, putative, expressed -


Gene co-expression network
sample Sobic002G395100 Sobic002G395100 Sobic006G219700 Sobic006G219700 Sobic002G395100--Sobic006G219700 Sobic001G400400 Sobic001G400400 Sobic002G395100--Sobic001G400400 Sobic003G197500 Sobic003G197500 Sobic002G395100--Sobic003G197500 Sobic008G043400 Sobic008G043400 Sobic002G395100--Sobic008G043400 Sobic009G259600 Sobic009G259600 Sobic002G395100--Sobic009G259600 Sobic010G034200 Sobic010G034200 Sobic002G395100--Sobic010G034200 Sobic004G318300 Sobic004G318300 Sobic002G395100--Sobic004G318300 Sobic003G027300 Sobic003G027300 Sobic002G395100--Sobic003G027300 Sobic010G230200 Sobic010G230200 Sobic002G395100--Sobic010G230200 Sobic006G219700--Sobic009G259600 Sobic006G219700--Sobic002G395100 Sobic006G219700--Sobic004G318300 Sobic006G219700--Sobic008G043400 Sobic006G219700--Sobic003G027300 Sobic006G219700--Sobic001G400400 Sobic006G219700--Sobic003G197500 Sobic006G219700--Sobic010G230200 Sobic009G087200 Sobic009G087200 Sobic006G219700--Sobic009G087200 Sobic001G400400--Sobic010G034200 Sobic009G227500 Sobic009G227500 Sobic001G400400--Sobic009G227500 Sobic001G400400--Sobic002G395100 Sobic001G400400--Sobic006G219700 Sobic001G400400--Sobic003G197500 Sobic001G400400--Sobic009G259600 Sobic001G400400--Sobic008G043400 Sobic006G234400 Sobic006G234400 Sobic001G400400--Sobic006G234400 Sobic007G061800 Sobic007G061800 Sobic001G400400--Sobic007G061800 Sobic003G197500--Sobic008G043400 Sobic003G114900 Sobic003G114900 Sobic003G197500--Sobic003G114900 Sobic001G511100 Sobic001G511100 Sobic003G197500--Sobic001G511100 Sobic002G427500 Sobic002G427500 Sobic003G197500--Sobic002G427500 Sobic006G127800 Sobic006G127800 Sobic003G197500--Sobic006G127800 Sobic003G197500--Sobic002G395100 Sobic003G197500--Sobic010G230200 Sobic006G270800 Sobic006G270800 Sobic003G197500--Sobic006G270800 Sobic005G031700 Sobic005G031700 Sobic003G197500--Sobic005G031700 Sobic008G043400--Sobic003G197500 Sobic008G043400--Sobic001G511100 Sobic008G043400--Sobic010G230200 Sobic008G043400--Sobic004G318300 Sobic008G043400--Sobic005G031700 Sobic008G043400--Sobic003G114900 Sobic008G043400--Sobic003G027300 Sobic008G043400--Sobic002G395100 Sobic008G043400--Sobic006G219700 Sobic009G259600--Sobic006G219700 Sobic009G259600--Sobic004G318300 Sobic009G259600--Sobic008G043400 Sobic009G259600--Sobic003G027300 Sobic009G259600--Sobic002G395100 Sobic009G259600--Sobic003G197500 Sobic009G259600--Sobic001G400400 Sobic009G259600--Sobic010G230200 Sobic009G259600--Sobic009G087200 Sobic010G034200--Sobic001G400400 Sobic010G034200--Sobic009G227500 Sobic010G034200--Sobic002G395100 Sobic010G034200--Sobic006G219700 Sobic010G034200--Sobic007G061800 Sobic008G075800 Sobic008G075800 Sobic010G034200--Sobic008G075800 Sobic010G034200--Sobic006G234400 Sobic010G034200--Sobic009G259600 Sobic001G222800 Sobic001G222800 Sobic010G034200--Sobic001G222800 Sobic004G318300--Sobic003G027300 Sobic004G318300--Sobic010G230200 Sobic004G318300--Sobic009G087200 Sobic004G318300--Sobic008G043400 Sobic004G318300--Sobic009G259600 Sobic004G318300--Sobic006G219700 Sobic004G318300--Sobic005G031700 Sobic004G318300--Sobic001G511100 Sobic004G318300--Sobic003G197500 Sobic003G027300--Sobic004G318300 Sobic003G027300--Sobic010G230200 Sobic003G027300--Sobic009G087200 Sobic003G027300--Sobic008G043400 Sobic003G027300--Sobic005G031700 Sobic006G071096 Sobic006G071096 Sobic003G027300--Sobic006G071096 Sobic003G027300--Sobic001G511100 Sobic003G027300--Sobic009G259600 Sobic003G027300--Sobic006G219700 Sobic010G230200--Sobic003G027300 Sobic010G230200--Sobic005G031700 Sobic010G230200--Sobic004G318300 Sobic010G230200--Sobic008G043400 Sobic010G230200--Sobic001G511100 Sobic010G230200--Sobic009G087200 Sobic004G147700 Sobic004G147700 Sobic010G230200--Sobic004G147700 Sobic010G230200--Sobic003G197500 Sobic010G230200--Sobic003G114900
Octagon: transcription factors


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