Gene annotation
Transcriptome id Sobic.009G089000.1
Synonym Sb09g008200, CHX19, ATCHX19
Functional annotation ATCHX, putative, expressed
UniProt C5YVA3
Pfam PF00999
Panther DB PTHR32468 PTHR32468:SF24
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0015299solute:proton antiporter activity GO:0006812cation transport


Orthologs (automatic annotation)
TAIR AT3G17630 : cation/H+ exchanger 19
RAP-DB (Rice) LOC_Os05g19500.1 : ATCHX, putative, expressed
MaizeGDB (Corn) Zm00025a044040 , Zm00025a036954 , Zm00025a037802
Brachypodium KQJ85768 , KQJ85769 , KQK10316 , PNT73109 , KQK12360
Barley HORVU1Hr1G069170.2 , HORVU1Hr1G069170.3 , HORVU1Hr1G069170.6 , HORVU1Hr1G069170.4 , HORVU1Hr1G069170.5 , HORVU1Hr1G069170.8 , HORVU1Hr1G069170.9 , HORVU1Hr1G069170.10 , HORVU5Hr1G115390.2 , HORVU5Hr1G115390.3 , HORVU5Hr1G115390.1
Wheat TraesCS5A02G031600 , TraesCS5D02G039800 , TraesCS5D02G505000 , TraesCS6B02G340700 , TraesCS5A02G031700 , TraesCS1D02G303200 , TraesCS1D02G303200 , TraesCS1B02G314100 , TraesCS5B02G031800 , TraesCS6A02G310700 , TraesCS6D02G290000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G427500 pectinesterase, putative, expressed K01051: pectinesterase
2 Sobic.003G009600 POEI21 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
3 Sobic.001G024300 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
4 Sobic.009G116100 conserved hypothetical protein -
5 Sobic.006G127800 armadillo/beta-catenin repeat family protein, putative, expressed -
6 Sobic.006G270800 EF hand family protein, putative, expressed -
7 Sobic.009G090400 - -
8 Sobic.006G136700 GPI-anchored protein, putative, expressed -
9 Sobic.007G222200 - -
10 Sobic.002G157900 - -
11 Sobic.003G114900 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
12 Sobic.005G122100 expressed protein -
13 Sobic.001G511100 expressed protein -
14 Sobic.003G147700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
15 Sobic.002G417401 - -
16 Sobic.001G332200 cysteine proteinase EP-B 1 precursor, putative, expressed -
17 Sobic.002G091300 pectinesterase inhibitor domain containing protein, expressed -
18 Sobic.003G232100 - -
19 Sobic.005G031700 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
20 Sobic.003G197500 protein kinase domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic009G089000 Sobic009G089000 Sobic002G427500 Sobic002G427500 Sobic009G089000--Sobic002G427500 Sobic003G009600 Sobic003G009600 Sobic009G089000--Sobic003G009600 Sobic001G024300 Sobic001G024300 Sobic009G089000--Sobic001G024300 Sobic009G116100 Sobic009G116100 Sobic009G089000--Sobic009G116100 Sobic006G127800 Sobic006G127800 Sobic009G089000--Sobic006G127800 Sobic006G270800 Sobic006G270800 Sobic009G089000--Sobic006G270800 Sobic009G090400 Sobic009G090400 Sobic009G089000--Sobic009G090400 Sobic006G136700 Sobic006G136700 Sobic009G089000--Sobic006G136700 Sobic007G222200 Sobic007G222200 Sobic009G089000--Sobic007G222200 Sobic002G427500--Sobic006G270800 Sobic002G427500--Sobic006G127800 Sobic002G427500--Sobic003G009600 Sobic002G427500--Sobic009G089000 Sobic003G114900 Sobic003G114900 Sobic002G427500--Sobic003G114900 Sobic003G147700 Sobic003G147700 Sobic002G427500--Sobic003G147700 Sobic002G427500--Sobic001G024300 Sobic005G122100 Sobic005G122100 Sobic002G427500--Sobic005G122100 Sobic002G427500--Sobic009G090400 Sobic003G009600--Sobic001G024300 Sobic003G009600--Sobic002G427500 Sobic003G009600--Sobic009G116100 Sobic003G009600--Sobic009G089000 Sobic003G009600--Sobic007G222200 Sobic003G009600--Sobic006G270800 Sobic003G009600--Sobic006G127800 Sobic003G009600--Sobic009G090400 Sobic003G009600--Sobic006G136700 Sobic001G024300--Sobic009G116100 Sobic001G024300--Sobic006G136700 Sobic001G024300--Sobic003G009600 Sobic002G157900 Sobic002G157900 Sobic001G024300--Sobic002G157900 Sobic001G024300--Sobic007G222200 Sobic002G417401 Sobic002G417401 Sobic001G024300--Sobic002G417401 Sobic001G024300--Sobic009G090400 Sobic001G332200 Sobic001G332200 Sobic001G024300--Sobic001G332200 Sobic001G024300--Sobic009G089000 Sobic009G116100--Sobic001G024300 Sobic009G116100--Sobic006G136700 Sobic009G116100--Sobic003G009600 Sobic009G116100--Sobic001G332200 Sobic002G091300 Sobic002G091300 Sobic009G116100--Sobic002G091300 Sobic009G116100--Sobic002G157900 Sobic009G116100--Sobic002G417401 Sobic002G282600 Sobic002G282600 Sobic009G116100--Sobic002G282600 Sobic009G116100--Sobic009G089000 Sobic006G127800--Sobic002G427500 Sobic006G127800--Sobic006G270800 Sobic006G127800--Sobic003G114900 Sobic006G127800--Sobic003G009600 Sobic006G127800--Sobic009G089000 Sobic006G127800--Sobic003G147700 Sobic006G127800--Sobic005G122100 Sobic003G232100 Sobic003G232100 Sobic006G127800--Sobic003G232100 Sobic006G127800--Sobic001G024300 Sobic006G270800--Sobic002G427500 Sobic006G270800--Sobic006G127800 Sobic006G270800--Sobic003G147700 Sobic006G270800--Sobic003G232100 Sobic006G270800--Sobic003G009600 Sobic006G270800--Sobic005G122100 Sobic006G270800--Sobic009G089000 Sobic003G114800 Sobic003G114800 Sobic006G270800--Sobic003G114800 Sobic006G270800--Sobic009G090400 Sobic009G090400--Sobic002G157900 Sobic009G090400--Sobic007G222200 Sobic009G090400--Sobic005G122100 Sobic009G090400--Sobic001G024300 Sobic009G090400--Sobic002G417401 Sobic009G090400--Sobic003G009600 Sobic009G090400--Sobic006G136700 Sobic009G090400--Sobic001G332200 Sobic009G090400--Sobic009G116100 Sobic006G136700--Sobic001G332200 Sobic006G136700--Sobic001G024300 Sobic006G136700--Sobic009G116100 Sobic006G136700--Sobic002G157900 Sobic006G136700--Sobic002G417401 Sobic006G136700--Sobic009G090400 Sobic004G131400 Sobic004G131400 Sobic006G136700--Sobic004G131400 Sobic006G136700--Sobic003G009600 Sobic006G136700--Sobic007G222200 Sobic007G222200--Sobic009G090400 Sobic007G222200--Sobic002G417401 Sobic007G222200--Sobic001G024300 Sobic007G222200--Sobic002G157900 Sobic007G222200--Sobic005G122100 Sobic007G222200--Sobic003G009600 Sobic007G222200--Sobic006G136700 Sobic007G222200--Sobic009G116100 Sobic007G222200--Sobic001G332200
Octagon: transcription factors


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