Gene annotation
Transcriptome id Sobic.003G197500.1
Synonym Sb03g026030
Functional annotation protein kinase domain containing protein, putative, expressed
UniProt A0A1B6Q4G6
Pfam PF00582 PF00069
Panther DB PTHR27003 PTHR27003:SF48
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006950; response to stress GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G12000 : Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
RAP-DB (Rice) LOC_Os01g39970.1 : protein kinase domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a038392 , Zm00025a032979 , Zm00025a034564 , Zm00025a049715 , Zm00025a028496 , Zm00025a034880
Brachypodium KQK01066 , KQK19920 , KQK19921 , PNT76303 , PNT72256
Barley HORVU7Hr1G031830.4 , HORVU7Hr1G031830.5 , HORVU7Hr1G031830.6 , HORVU7Hr1G031830.7 , HORVU7Hr1G031830.1 , HORVU7Hr1G031830.2 , HORVU7Hr1G031830.3 , HORVU7Hr1G031830.8 , HORVU7Hr1G031830.9 , HORVU6Hr1G083440.11 , HORVU6Hr1G083440.10 , HORVU3Hr1G050430.11 , HORVU7Hr1G018700.1 , HORVU6Hr1G083440.9 , HORVU6Hr1G083440.8 , HORVU6Hr1G083440.1 , HORVU6Hr1G083440.2 , HORVU6Hr1G083440.4 , HORVU6Hr1G083440.7 , HORVU6Hr1G083440.6 , HORVU7Hr1G018750.1 , HORVU7Hr1G018750.2 , HORVU3Hr1G050430.9 , HORVU3Hr1G050430.8 , HORVU3Hr1G050430.1 , HORVU3Hr1G050430.3 , HORVU3Hr1G050430.2 , HORVU3Hr1G050430.5 , HORVU3Hr1G050430.4 , HORVU3Hr1G050430.7 , HORVU3Hr1G050430.6 , HORVU7Hr1G031830.10
Wheat TraesCS4A02G382700 , TraesCS6B02G379600 , TraesCS3D02G211800 , TraesCS3D02G211800 , TraesCS4A02G382700 , TraesCS4A02G382700 , TraesCS4A02G382700 , TraesCS7D02G079400 , TraesCS7D02G079400 , TraesCS7B02G059300 , TraesCS3A02G208900 , TraesCS3A02G208900 , TraesCS7A02G155200 , TraesCS6A02G346100 , TraesCS6A02G346100 , TraesCS4A02G382900 , TraesCS6B02G379600 , TraesCS3B02G239200 , TraesCS3B02G239200 , TraesCS6D02G329000 , TraesCS7D02G155500 , TraesCS6D02G329000
Populus -


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cDNA sequences
Sobic.003G197500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G043400 - -
2 Sobic.003G114900 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
3 Sobic.001G511100 expressed protein -
4 Sobic.002G427500 pectinesterase, putative, expressed K01051: pectinesterase
5 Sobic.006G127800 armadillo/beta-catenin repeat family protein, putative, expressed -
6 Sobic.002G395100 DEF8 - Defensin and Defensin-like DEFL family, expressed -
7 Sobic.010G230200 myb-like DNA-binding domain containing protein, expressed K09422: transcription factor MYB, plant
8 Sobic.006G270800 EF hand family protein, putative, expressed -
9 Sobic.005G031700 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
10 Sobic.004G318300 endoglucanase, putative, expressed K01179: endoglucanase
11 Sobic.006G219700 nitrate-induced NOI protein, expressed -
12 Sobic.003G009600 POEI21 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
13 Sobic.009G089000 ATCHX, putative, expressed -
14 Sobic.001G400400 pectinesterase, putative, expressed K01051: pectinesterase
15 Sobic.009G259600 aspartyl protease family protein, putative, expressed -
16 Sobic.005G044600 pyridine nucleotide-disulphide oxidoreductase family protein, putative, expressed -
17 Sobic.003G027300 RALFL17 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
18 Sobic.003G147700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
19 Sobic.002G304300 integral membrane protein DUF6 domain containing protein, expressed -
20 Sobic.009G116100 conserved hypothetical protein -


Gene co-expression network
sample Sobic003G197500 Sobic003G197500 Sobic008G043400 Sobic008G043400 Sobic003G197500--Sobic008G043400 Sobic003G114900 Sobic003G114900 Sobic003G197500--Sobic003G114900 Sobic001G511100 Sobic001G511100 Sobic003G197500--Sobic001G511100 Sobic002G427500 Sobic002G427500 Sobic003G197500--Sobic002G427500 Sobic006G127800 Sobic006G127800 Sobic003G197500--Sobic006G127800 Sobic002G395100 Sobic002G395100 Sobic003G197500--Sobic002G395100 Sobic010G230200 Sobic010G230200 Sobic003G197500--Sobic010G230200 Sobic006G270800 Sobic006G270800 Sobic003G197500--Sobic006G270800 Sobic005G031700 Sobic005G031700 Sobic003G197500--Sobic005G031700 Sobic008G043400--Sobic003G197500 Sobic008G043400--Sobic001G511100 Sobic008G043400--Sobic010G230200 Sobic004G318300 Sobic004G318300 Sobic008G043400--Sobic004G318300 Sobic008G043400--Sobic005G031700 Sobic008G043400--Sobic003G114900 Sobic003G027300 Sobic003G027300 Sobic008G043400--Sobic003G027300 Sobic008G043400--Sobic002G395100 Sobic006G219700 Sobic006G219700 Sobic008G043400--Sobic006G219700 Sobic003G114900--Sobic006G127800 Sobic003G114900--Sobic002G427500 Sobic003G114900--Sobic003G197500 Sobic003G114900--Sobic006G270800 Sobic003G009600 Sobic003G009600 Sobic003G114900--Sobic003G009600 Sobic003G114900--Sobic008G043400 Sobic009G089000 Sobic009G089000 Sobic003G114900--Sobic009G089000 Sobic003G114900--Sobic001G511100 Sobic009G116100 Sobic009G116100 Sobic003G114900--Sobic009G116100 Sobic001G511100--Sobic008G043400 Sobic001G511100--Sobic010G230200 Sobic001G511100--Sobic005G031700 Sobic001G511100--Sobic003G197500 Sobic001G511100--Sobic003G114900 Sobic001G511100--Sobic009G116100 Sobic001G511100--Sobic003G009600 Sobic001G511100--Sobic002G427500 Sobic001G511100--Sobic004G318300 Sobic002G427500--Sobic006G270800 Sobic002G427500--Sobic006G127800 Sobic002G427500--Sobic003G009600 Sobic002G427500--Sobic009G089000 Sobic002G427500--Sobic003G114900 Sobic003G147700 Sobic003G147700 Sobic002G427500--Sobic003G147700 Sobic001G024300 Sobic001G024300 Sobic002G427500--Sobic001G024300 Sobic005G122100 Sobic005G122100 Sobic002G427500--Sobic005G122100 Sobic009G090400 Sobic009G090400 Sobic002G427500--Sobic009G090400 Sobic006G127800--Sobic002G427500 Sobic006G127800--Sobic006G270800 Sobic006G127800--Sobic003G114900 Sobic006G127800--Sobic003G009600 Sobic006G127800--Sobic009G089000 Sobic006G127800--Sobic003G147700 Sobic006G127800--Sobic005G122100 Sobic003G232100 Sobic003G232100 Sobic006G127800--Sobic003G232100 Sobic006G127800--Sobic001G024300 Sobic002G395100--Sobic006G219700 Sobic001G400400 Sobic001G400400 Sobic002G395100--Sobic001G400400 Sobic002G395100--Sobic003G197500 Sobic002G395100--Sobic008G043400 Sobic009G259600 Sobic009G259600 Sobic002G395100--Sobic009G259600 Sobic010G034200 Sobic010G034200 Sobic002G395100--Sobic010G034200 Sobic002G395100--Sobic004G318300 Sobic002G395100--Sobic003G027300 Sobic002G395100--Sobic010G230200 Sobic010G230200--Sobic003G027300 Sobic010G230200--Sobic005G031700 Sobic010G230200--Sobic004G318300 Sobic010G230200--Sobic008G043400 Sobic010G230200--Sobic001G511100 Sobic009G087200 Sobic009G087200 Sobic010G230200--Sobic009G087200 Sobic004G147700 Sobic004G147700 Sobic010G230200--Sobic004G147700 Sobic010G230200--Sobic003G197500 Sobic010G230200--Sobic003G114900 Sobic006G270800--Sobic002G427500 Sobic006G270800--Sobic006G127800 Sobic006G270800--Sobic003G147700 Sobic006G270800--Sobic003G232100 Sobic006G270800--Sobic003G009600 Sobic006G270800--Sobic005G122100 Sobic006G270800--Sobic009G089000 Sobic003G114800 Sobic003G114800 Sobic006G270800--Sobic003G114800 Sobic006G270800--Sobic009G090400 Sobic005G031700--Sobic010G230200 Sobic005G031700--Sobic001G511100 Sobic005G031700--Sobic008G043400 Sobic005G031700--Sobic003G027300 Sobic005G031700--Sobic004G147700 Sobic005G031700--Sobic009G116100 Sobic005G031700--Sobic004G318300 Sobic002G091300 Sobic002G091300 Sobic005G031700--Sobic002G091300 Sobic002G282600 Sobic002G282600 Sobic005G031700--Sobic002G282600
Octagon: transcription factors


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