Gene annotation
Transcriptome id Sobic.001G511100.1
Synonym Sb01g047700
Functional annotation expressed protein
UniProt C5WYX9
Pfam PF05664
Panther DB PTHR31280 PTHR31280:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G33420 : Protein of unknown function (DUF810)
RAP-DB (Rice) LOC_Os03g04560.1 : expressed protein
MaizeGDB (Corn) Zm00025a040561 , Zm00025a006656 , Zm00025a000540
Brachypodium KQJ97036 , PNT78247
Barley HORVU1Hr1G039810.1 , HORVU4Hr1G083660.3 , HORVU4Hr1G083660.2
Wheat TraesCS4D02G334500 , TraesCS5A02G507900 , TraesCS1A02G150700 , TraesCS1B02G168300 , TraesCS1B02G168300 , TraesCS1D02G147700 , TraesCS4B02G338200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G043400 - -
2 Sobic.010G230200 myb-like DNA-binding domain containing protein, expressed K09422: transcription factor MYB, plant
3 Sobic.005G031700 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
4 Sobic.003G197500 protein kinase domain containing protein, putative, expressed -
5 Sobic.003G114900 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
6 Sobic.009G116100 conserved hypothetical protein -
7 Sobic.003G009600 POEI21 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
8 Sobic.002G427500 pectinesterase, putative, expressed K01051: pectinesterase
9 Sobic.004G318300 endoglucanase, putative, expressed K01179: endoglucanase
10 Sobic.009G089000 ATCHX, putative, expressed -
11 Sobic.003G027300 RALFL17 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
12 Sobic.002G091300 pectinesterase inhibitor domain containing protein, expressed -
13 Sobic.006G127800 armadillo/beta-catenin repeat family protein, putative, expressed -
14 Sobic.001G024300 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
15 Sobic.004G147700 pectinesterase inhibitor domain containing protein, putative, expressed -
16 Sobic.005G044600 pyridine nucleotide-disulphide oxidoreductase family protein, putative, expressed -
17 Sobic.006G270800 EF hand family protein, putative, expressed -
18 Sobic.002G282600 copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
19 Sobic.006G136700 GPI-anchored protein, putative, expressed -
20 Sobic.002G304300 integral membrane protein DUF6 domain containing protein, expressed -


Gene co-expression network
sample Sobic001G511100 Sobic001G511100 Sobic008G043400 Sobic008G043400 Sobic001G511100--Sobic008G043400 Sobic010G230200 Sobic010G230200 Sobic001G511100--Sobic010G230200 Sobic005G031700 Sobic005G031700 Sobic001G511100--Sobic005G031700 Sobic003G197500 Sobic003G197500 Sobic001G511100--Sobic003G197500 Sobic003G114900 Sobic003G114900 Sobic001G511100--Sobic003G114900 Sobic009G116100 Sobic009G116100 Sobic001G511100--Sobic009G116100 Sobic003G009600 Sobic003G009600 Sobic001G511100--Sobic003G009600 Sobic002G427500 Sobic002G427500 Sobic001G511100--Sobic002G427500 Sobic004G318300 Sobic004G318300 Sobic001G511100--Sobic004G318300 Sobic008G043400--Sobic003G197500 Sobic008G043400--Sobic001G511100 Sobic008G043400--Sobic010G230200 Sobic008G043400--Sobic004G318300 Sobic008G043400--Sobic005G031700 Sobic008G043400--Sobic003G114900 Sobic003G027300 Sobic003G027300 Sobic008G043400--Sobic003G027300 Sobic002G395100 Sobic002G395100 Sobic008G043400--Sobic002G395100 Sobic006G219700 Sobic006G219700 Sobic008G043400--Sobic006G219700 Sobic010G230200--Sobic003G027300 Sobic010G230200--Sobic005G031700 Sobic010G230200--Sobic004G318300 Sobic010G230200--Sobic008G043400 Sobic010G230200--Sobic001G511100 Sobic009G087200 Sobic009G087200 Sobic010G230200--Sobic009G087200 Sobic004G147700 Sobic004G147700 Sobic010G230200--Sobic004G147700 Sobic010G230200--Sobic003G197500 Sobic010G230200--Sobic003G114900 Sobic005G031700--Sobic010G230200 Sobic005G031700--Sobic001G511100 Sobic005G031700--Sobic008G043400 Sobic005G031700--Sobic003G027300 Sobic005G031700--Sobic004G147700 Sobic005G031700--Sobic009G116100 Sobic005G031700--Sobic004G318300 Sobic002G091300 Sobic002G091300 Sobic005G031700--Sobic002G091300 Sobic002G282600 Sobic002G282600 Sobic005G031700--Sobic002G282600 Sobic003G197500--Sobic008G043400 Sobic003G197500--Sobic003G114900 Sobic003G197500--Sobic001G511100 Sobic003G197500--Sobic002G427500 Sobic006G127800 Sobic006G127800 Sobic003G197500--Sobic006G127800 Sobic003G197500--Sobic002G395100 Sobic003G197500--Sobic010G230200 Sobic006G270800 Sobic006G270800 Sobic003G197500--Sobic006G270800 Sobic003G197500--Sobic005G031700 Sobic003G114900--Sobic006G127800 Sobic003G114900--Sobic002G427500 Sobic003G114900--Sobic003G197500 Sobic003G114900--Sobic006G270800 Sobic003G114900--Sobic003G009600 Sobic003G114900--Sobic008G043400 Sobic009G089000 Sobic009G089000 Sobic003G114900--Sobic009G089000 Sobic003G114900--Sobic001G511100 Sobic003G114900--Sobic009G116100 Sobic001G024300 Sobic001G024300 Sobic009G116100--Sobic001G024300 Sobic006G136700 Sobic006G136700 Sobic009G116100--Sobic006G136700 Sobic009G116100--Sobic003G009600 Sobic001G332200 Sobic001G332200 Sobic009G116100--Sobic001G332200 Sobic009G116100--Sobic002G091300 Sobic002G157900 Sobic002G157900 Sobic009G116100--Sobic002G157900 Sobic002G417401 Sobic002G417401 Sobic009G116100--Sobic002G417401 Sobic009G116100--Sobic002G282600 Sobic009G116100--Sobic009G089000 Sobic003G009600--Sobic001G024300 Sobic003G009600--Sobic002G427500 Sobic003G009600--Sobic009G116100 Sobic003G009600--Sobic009G089000 Sobic007G222200 Sobic007G222200 Sobic003G009600--Sobic007G222200 Sobic003G009600--Sobic006G270800 Sobic003G009600--Sobic006G127800 Sobic009G090400 Sobic009G090400 Sobic003G009600--Sobic009G090400 Sobic003G009600--Sobic006G136700 Sobic002G427500--Sobic006G270800 Sobic002G427500--Sobic006G127800 Sobic002G427500--Sobic003G009600 Sobic002G427500--Sobic009G089000 Sobic002G427500--Sobic003G114900 Sobic003G147700 Sobic003G147700 Sobic002G427500--Sobic003G147700 Sobic002G427500--Sobic001G024300 Sobic005G122100 Sobic005G122100 Sobic002G427500--Sobic005G122100 Sobic002G427500--Sobic009G090400 Sobic004G318300--Sobic003G027300 Sobic004G318300--Sobic010G230200 Sobic004G318300--Sobic009G087200 Sobic004G318300--Sobic008G043400 Sobic009G259600 Sobic009G259600 Sobic004G318300--Sobic009G259600 Sobic004G318300--Sobic006G219700 Sobic004G318300--Sobic005G031700 Sobic004G318300--Sobic001G511100 Sobic004G318300--Sobic003G197500
Octagon: transcription factors


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