Gene annotation
Transcriptome id Sobic.006G127800.1
Synonym Sb06g020800
Functional annotation armadillo/beta-catenin repeat family protein, putative, expressed
UniProt C5YAY5
Pfam PF04564
Panther DB PTHR22849 PTHR22849:SF22
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016567; protein ubiquitination GO:0004842ubiquitin-protein transferase activity


Orthologs (automatic annotation)
TAIR AT1G24330 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os04g41250.1 : armadillo/beta-catenin repeat family protein, putative, expressed
MaizeGDB (Corn) Zm00025a056339 , Zm00025a010925
Brachypodium KQJ83284 , PNT61348
Barley HORVU2Hr1G084670.6 , HORVU2Hr1G084670.4 , HORVU2Hr1G084670.3 , HORVU2Hr1G084670.5 , HORVU2Hr1G084670.2 , HORVU2Hr1G084670.1
Wheat TraesCS2D02G346100 , TraesCS2A02G347800 , TraesCS2B02G366200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G427500 pectinesterase, putative, expressed K01051: pectinesterase
2 Sobic.006G270800 EF hand family protein, putative, expressed -
3 Sobic.003G114900 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
4 Sobic.003G009600 POEI21 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
5 Sobic.009G089000 ATCHX, putative, expressed -
6 Sobic.003G147700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
7 Sobic.005G122100 expressed protein -
8 Sobic.003G232100 - -
9 Sobic.001G024300 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
10 Sobic.003G197500 protein kinase domain containing protein, putative, expressed -
11 Sobic.009G090400 - -
12 Sobic.003G114800 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
13 Sobic.007G222200 - -
14 Sobic.009G116100 conserved hypothetical protein -
15 Sobic.007G103000 FGGY family of carbohydrate kinases, putative, expressed K00864: glpK, glycerol kinase
16 Sobic.007G134260 - -
17 Sobic.001G511100 expressed protein -
18 Sobic.002G157900 - -
19 Sobic.001G278100 serine/threonine-protein kinase, putative, expressed -
20 Sobic.004G091000 pectate lyase precursor, putative, expressed K01728: pectate lyase


Gene co-expression network
sample Sobic006G127800 Sobic006G127800 Sobic002G427500 Sobic002G427500 Sobic006G127800--Sobic002G427500 Sobic006G270800 Sobic006G270800 Sobic006G127800--Sobic006G270800 Sobic003G114900 Sobic003G114900 Sobic006G127800--Sobic003G114900 Sobic003G009600 Sobic003G009600 Sobic006G127800--Sobic003G009600 Sobic009G089000 Sobic009G089000 Sobic006G127800--Sobic009G089000 Sobic003G147700 Sobic003G147700 Sobic006G127800--Sobic003G147700 Sobic005G122100 Sobic005G122100 Sobic006G127800--Sobic005G122100 Sobic003G232100 Sobic003G232100 Sobic006G127800--Sobic003G232100 Sobic001G024300 Sobic001G024300 Sobic006G127800--Sobic001G024300 Sobic002G427500--Sobic006G270800 Sobic002G427500--Sobic006G127800 Sobic002G427500--Sobic003G009600 Sobic002G427500--Sobic009G089000 Sobic002G427500--Sobic003G114900 Sobic002G427500--Sobic003G147700 Sobic002G427500--Sobic001G024300 Sobic002G427500--Sobic005G122100 Sobic009G090400 Sobic009G090400 Sobic002G427500--Sobic009G090400 Sobic006G270800--Sobic002G427500 Sobic006G270800--Sobic006G127800 Sobic006G270800--Sobic003G147700 Sobic006G270800--Sobic003G232100 Sobic006G270800--Sobic003G009600 Sobic006G270800--Sobic005G122100 Sobic006G270800--Sobic009G089000 Sobic003G114800 Sobic003G114800 Sobic006G270800--Sobic003G114800 Sobic006G270800--Sobic009G090400 Sobic003G114900--Sobic006G127800 Sobic003G114900--Sobic002G427500 Sobic003G197500 Sobic003G197500 Sobic003G114900--Sobic003G197500 Sobic003G114900--Sobic006G270800 Sobic003G114900--Sobic003G009600 Sobic008G043400 Sobic008G043400 Sobic003G114900--Sobic008G043400 Sobic003G114900--Sobic009G089000 Sobic001G511100 Sobic001G511100 Sobic003G114900--Sobic001G511100 Sobic009G116100 Sobic009G116100 Sobic003G114900--Sobic009G116100 Sobic003G009600--Sobic001G024300 Sobic003G009600--Sobic002G427500 Sobic003G009600--Sobic009G116100 Sobic003G009600--Sobic009G089000 Sobic007G222200 Sobic007G222200 Sobic003G009600--Sobic007G222200 Sobic003G009600--Sobic006G270800 Sobic003G009600--Sobic006G127800 Sobic003G009600--Sobic009G090400 Sobic006G136700 Sobic006G136700 Sobic003G009600--Sobic006G136700 Sobic009G089000--Sobic002G427500 Sobic009G089000--Sobic003G009600 Sobic009G089000--Sobic001G024300 Sobic009G089000--Sobic009G116100 Sobic009G089000--Sobic006G127800 Sobic009G089000--Sobic006G270800 Sobic009G089000--Sobic009G090400 Sobic009G089000--Sobic006G136700 Sobic009G089000--Sobic007G222200 Sobic003G147700--Sobic003G114800 Sobic003G147700--Sobic006G270800 Sobic007G103000 Sobic007G103000 Sobic003G147700--Sobic007G103000 Sobic007G134260 Sobic007G134260 Sobic003G147700--Sobic007G134260 Sobic003G147700--Sobic002G427500 Sobic004G091000 Sobic004G091000 Sobic003G147700--Sobic004G091000 Sobic003G147700--Sobic006G127800 Sobic003G147700--Sobic005G122100 Sobic003G147700--Sobic003G232100 Sobic005G122100--Sobic009G090400 Sobic005G122100--Sobic007G103000 Sobic005G122100--Sobic007G134260 Sobic005G122100--Sobic007G222200 Sobic005G122100--Sobic006G270800 Sobic005G122100--Sobic003G232100 Sobic002G157900 Sobic002G157900 Sobic005G122100--Sobic002G157900 Sobic005G122100--Sobic003G147700 Sobic005G122100--Sobic002G427500 Sobic003G232100--Sobic007G134260 Sobic003G232100--Sobic006G270800 Sobic003G232100--Sobic007G103000 Sobic003G232100--Sobic005G122100 Sobic003G232100--Sobic004G091000 Sobic003G232100--Sobic003G114800 Sobic003G232100--Sobic003G147700 Sobic003G232100--Sobic002G427500 Sobic003G232100--Sobic006G127800 Sobic001G024300--Sobic009G116100 Sobic001G024300--Sobic006G136700 Sobic001G024300--Sobic003G009600 Sobic001G024300--Sobic002G157900 Sobic001G024300--Sobic007G222200 Sobic002G417401 Sobic002G417401 Sobic001G024300--Sobic002G417401 Sobic001G024300--Sobic009G090400 Sobic001G332200 Sobic001G332200 Sobic001G024300--Sobic001G332200 Sobic001G024300--Sobic009G089000
Octagon: transcription factors


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