Gene annotation
Transcriptome id Sobic.005G044600.1
Synonym Sb05g003680
Functional annotation pyridine nucleotide-disulphide oxidoreductase family protein, putative, expressed
UniProt C5Y543
Pfam PF00070
Panther DB PTHR22912 PTHR22912:SF180
NCBI CDD KOG2495; NADH-dehydrogenase (ubiquinone)
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT3G44190 : FAD/NAD(P)-binding oxidoreductase family protein
RAP-DB (Rice) LOC_Os11g05970.1 : pyridine nucleotide-disulphide oxidoreductase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a033686
Brachypodium KQJ89344
Barley HORVU4Hr1G020790.1 , HORVU4Hr1G020790.2
Wheat TraesCS4A02G200400 , TraesCS4D02G112400 , TraesCS4B02G114900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G043400 - -
2 Sobic.005G031700 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
3 Sobic.010G230200 myb-like DNA-binding domain containing protein, expressed K09422: transcription factor MYB, plant
4 Sobic.001G511100 expressed protein -
5 Sobic.003G197500 protein kinase domain containing protein, putative, expressed -
6 Sobic.003G114900 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
7 Sobic.009G116100 conserved hypothetical protein -
8 Sobic.002G427500 pectinesterase, putative, expressed K01051: pectinesterase
9 Sobic.009G089000 ATCHX, putative, expressed -
10 Sobic.003G009600 POEI21 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
11 Sobic.004G147700 pectinesterase inhibitor domain containing protein, putative, expressed -
12 Sobic.003G027300 RALFL17 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
13 Sobic.004G318300 endoglucanase, putative, expressed K01179: endoglucanase
14 Sobic.001G024300 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
15 Sobic.006G127800 armadillo/beta-catenin repeat family protein, putative, expressed -
16 Sobic.002G091300 pectinesterase inhibitor domain containing protein, expressed -
17 Sobic.006G136700 GPI-anchored protein, putative, expressed -
18 Sobic.002G282600 copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
19 Sobic.006G270800 EF hand family protein, putative, expressed -
20 Sobic.002G395100 DEF8 - Defensin and Defensin-like DEFL family, expressed -


Gene co-expression network
sample Sobic005G044600 Sobic005G044600 Sobic008G043400 Sobic008G043400 Sobic005G044600--Sobic008G043400 Sobic005G031700 Sobic005G031700 Sobic005G044600--Sobic005G031700 Sobic010G230200 Sobic010G230200 Sobic005G044600--Sobic010G230200 Sobic001G511100 Sobic001G511100 Sobic005G044600--Sobic001G511100 Sobic003G197500 Sobic003G197500 Sobic005G044600--Sobic003G197500 Sobic003G114900 Sobic003G114900 Sobic005G044600--Sobic003G114900 Sobic009G116100 Sobic009G116100 Sobic005G044600--Sobic009G116100 Sobic002G427500 Sobic002G427500 Sobic005G044600--Sobic002G427500 Sobic009G089000 Sobic009G089000 Sobic005G044600--Sobic009G089000 Sobic008G043400--Sobic003G197500 Sobic008G043400--Sobic001G511100 Sobic008G043400--Sobic010G230200 Sobic004G318300 Sobic004G318300 Sobic008G043400--Sobic004G318300 Sobic008G043400--Sobic005G031700 Sobic008G043400--Sobic003G114900 Sobic003G027300 Sobic003G027300 Sobic008G043400--Sobic003G027300 Sobic002G395100 Sobic002G395100 Sobic008G043400--Sobic002G395100 Sobic006G219700 Sobic006G219700 Sobic008G043400--Sobic006G219700 Sobic005G031700--Sobic010G230200 Sobic005G031700--Sobic001G511100 Sobic005G031700--Sobic008G043400 Sobic005G031700--Sobic003G027300 Sobic004G147700 Sobic004G147700 Sobic005G031700--Sobic004G147700 Sobic005G031700--Sobic009G116100 Sobic005G031700--Sobic004G318300 Sobic002G091300 Sobic002G091300 Sobic005G031700--Sobic002G091300 Sobic002G282600 Sobic002G282600 Sobic005G031700--Sobic002G282600 Sobic010G230200--Sobic003G027300 Sobic010G230200--Sobic005G031700 Sobic010G230200--Sobic004G318300 Sobic010G230200--Sobic008G043400 Sobic010G230200--Sobic001G511100 Sobic009G087200 Sobic009G087200 Sobic010G230200--Sobic009G087200 Sobic010G230200--Sobic004G147700 Sobic010G230200--Sobic003G197500 Sobic010G230200--Sobic003G114900 Sobic001G511100--Sobic008G043400 Sobic001G511100--Sobic010G230200 Sobic001G511100--Sobic005G031700 Sobic001G511100--Sobic003G197500 Sobic001G511100--Sobic003G114900 Sobic001G511100--Sobic009G116100 Sobic003G009600 Sobic003G009600 Sobic001G511100--Sobic003G009600 Sobic001G511100--Sobic002G427500 Sobic001G511100--Sobic004G318300 Sobic003G197500--Sobic008G043400 Sobic003G197500--Sobic003G114900 Sobic003G197500--Sobic001G511100 Sobic003G197500--Sobic002G427500 Sobic006G127800 Sobic006G127800 Sobic003G197500--Sobic006G127800 Sobic003G197500--Sobic002G395100 Sobic003G197500--Sobic010G230200 Sobic006G270800 Sobic006G270800 Sobic003G197500--Sobic006G270800 Sobic003G197500--Sobic005G031700 Sobic003G114900--Sobic006G127800 Sobic003G114900--Sobic002G427500 Sobic003G114900--Sobic003G197500 Sobic003G114900--Sobic006G270800 Sobic003G114900--Sobic003G009600 Sobic003G114900--Sobic008G043400 Sobic003G114900--Sobic009G089000 Sobic003G114900--Sobic001G511100 Sobic003G114900--Sobic009G116100 Sobic001G024300 Sobic001G024300 Sobic009G116100--Sobic001G024300 Sobic006G136700 Sobic006G136700 Sobic009G116100--Sobic006G136700 Sobic009G116100--Sobic003G009600 Sobic001G332200 Sobic001G332200 Sobic009G116100--Sobic001G332200 Sobic009G116100--Sobic002G091300 Sobic002G157900 Sobic002G157900 Sobic009G116100--Sobic002G157900 Sobic002G417401 Sobic002G417401 Sobic009G116100--Sobic002G417401 Sobic009G116100--Sobic002G282600 Sobic009G116100--Sobic009G089000 Sobic002G427500--Sobic006G270800 Sobic002G427500--Sobic006G127800 Sobic002G427500--Sobic003G009600 Sobic002G427500--Sobic009G089000 Sobic002G427500--Sobic003G114900 Sobic003G147700 Sobic003G147700 Sobic002G427500--Sobic003G147700 Sobic002G427500--Sobic001G024300 Sobic005G122100 Sobic005G122100 Sobic002G427500--Sobic005G122100 Sobic009G090400 Sobic009G090400 Sobic002G427500--Sobic009G090400 Sobic009G089000--Sobic002G427500 Sobic009G089000--Sobic003G009600 Sobic009G089000--Sobic001G024300 Sobic009G089000--Sobic009G116100 Sobic009G089000--Sobic006G127800 Sobic009G089000--Sobic006G270800 Sobic009G089000--Sobic009G090400 Sobic009G089000--Sobic006G136700 Sobic007G222200 Sobic007G222200 Sobic009G089000--Sobic007G222200
Octagon: transcription factors


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