Gene annotation
Transcriptome id Sobic.006G234400.1
Synonym Sb06g030190
Functional annotation DUF617 domain containing protein, expressed
UniProt C5Y8X2
Pfam PF04759
Panther DB PTHR31696 PTHR31696:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G39610 : Protein of unknown function, DUF617
RAP-DB (Rice) LOC_Os04g54600.1 : DUF617 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a009602
Brachypodium PNT61959 , KQJ95214
Barley HORVU1Hr1G090350.2 , HORVU1Hr1G090350.3 , HORVU1Hr1G090350.1 , HORVU0Hr1G005690.1 , HORVU0Hr1G014500.4 , HORVU0Hr1G014500.2 , HORVU0Hr1G014500.3 , HORVU0Hr1G014500.1
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.006G234400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G061800 transporter family protein, putative, expressed -
2 Sobic.001G400400 pectinesterase, putative, expressed K01051: pectinesterase
3 Sobic.001G222800 expressed protein -
4 Sobic.010G034200 pectate lyase precursor, putative, expressed K01728: pectate lyase
5 Sobic.003G197500 protein kinase domain containing protein, putative, expressed -
6 Sobic.009G253700 phosphatidylinositol 3- and 4-kinase family protein, putative, expressed -
7 Sobic.009G227500 aspartyl protease family protein, putative, expressed -
8 Sobic.006G173400 actin-depolymerizing factor, putative, expressed K05765: cofilin
9 Sobic.010G177600 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
10 Sobic.010G118800 - -
11 Sobic.008G075800 - -
12 Sobic.008G079200 OsCML28 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
13 Sobic.002G395100 DEF8 - Defensin and Defensin-like DEFL family, expressed -
14 Sobic.001G364700 glycosyl transferase 8 domain containing protein, putative, expressed -
15 Sobic.003G114800 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
16 Sobic.006G127800 armadillo/beta-catenin repeat family protein, putative, expressed -
17 Sobic.003G114900 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
18 Sobic.005G000200 lipase, putative, expressed -
19 Sobic.008G043400 - -
20 Sobic.007G222700 - -


Gene co-expression network
sample Sobic006G234400 Sobic006G234400 Sobic007G061800 Sobic007G061800 Sobic006G234400--Sobic007G061800 Sobic001G400400 Sobic001G400400 Sobic006G234400--Sobic001G400400 Sobic001G222800 Sobic001G222800 Sobic006G234400--Sobic001G222800 Sobic010G034200 Sobic010G034200 Sobic006G234400--Sobic010G034200 Sobic003G197500 Sobic003G197500 Sobic006G234400--Sobic003G197500 Sobic009G253700 Sobic009G253700 Sobic006G234400--Sobic009G253700 Sobic009G227500 Sobic009G227500 Sobic006G234400--Sobic009G227500 Sobic006G173400 Sobic006G173400 Sobic006G234400--Sobic006G173400 Sobic010G177600 Sobic010G177600 Sobic006G234400--Sobic010G177600 Sobic008G075800 Sobic008G075800 Sobic007G061800--Sobic008G075800 Sobic010G118800 Sobic010G118800 Sobic007G061800--Sobic010G118800 Sobic007G061800--Sobic001G222800 Sobic007G061800--Sobic010G177600 Sobic001G364700 Sobic001G364700 Sobic007G061800--Sobic001G364700 Sobic007G222700 Sobic007G222700 Sobic007G061800--Sobic007G222700 Sobic007G061800--Sobic006G234400 Sobic007G061800--Sobic009G227500 Sobic007G061800--Sobic010G034200 Sobic001G400400--Sobic010G034200 Sobic001G400400--Sobic009G227500 Sobic002G395100 Sobic002G395100 Sobic001G400400--Sobic002G395100 Sobic006G219700 Sobic006G219700 Sobic001G400400--Sobic006G219700 Sobic001G400400--Sobic003G197500 Sobic009G259600 Sobic009G259600 Sobic001G400400--Sobic009G259600 Sobic008G043400 Sobic008G043400 Sobic001G400400--Sobic008G043400 Sobic001G400400--Sobic006G234400 Sobic001G400400--Sobic007G061800 Sobic001G222800--Sobic008G075800 Sobic001G222800--Sobic007G061800 Sobic001G222800--Sobic010G118800 Sobic001G222800--Sobic010G177600 Sobic004G287200 Sobic004G287200 Sobic001G222800--Sobic004G287200 Sobic001G222800--Sobic007G222700 Sobic001G222800--Sobic001G364700 Sobic004G331500 Sobic004G331500 Sobic001G222800--Sobic004G331500 Sobic001G222800--Sobic006G234400 Sobic010G034200--Sobic001G400400 Sobic010G034200--Sobic009G227500 Sobic010G034200--Sobic002G395100 Sobic010G034200--Sobic006G219700 Sobic010G034200--Sobic007G061800 Sobic010G034200--Sobic008G075800 Sobic010G034200--Sobic006G234400 Sobic010G034200--Sobic009G259600 Sobic010G034200--Sobic001G222800 Sobic003G197500--Sobic008G043400 Sobic003G114900 Sobic003G114900 Sobic003G197500--Sobic003G114900 Sobic001G511100 Sobic001G511100 Sobic003G197500--Sobic001G511100 Sobic002G427500 Sobic002G427500 Sobic003G197500--Sobic002G427500 Sobic006G127800 Sobic006G127800 Sobic003G197500--Sobic006G127800 Sobic003G197500--Sobic002G395100 Sobic010G230200 Sobic010G230200 Sobic003G197500--Sobic010G230200 Sobic006G270800 Sobic006G270800 Sobic003G197500--Sobic006G270800 Sobic005G031700 Sobic005G031700 Sobic003G197500--Sobic005G031700 Sobic009G253700--Sobic006G234400 Sobic009G253700--Sobic001G400400 Sobic009G253700--Sobic002G395100 Sobic009G253700--Sobic006G219700 Sobic009G253700--Sobic003G197500 Sobic009G253700--Sobic010G034200 Sobic009G253700--Sobic008G043400 Sobic009G253700--Sobic006G173400 Sobic009G253700--Sobic009G259600 Sobic009G227500--Sobic001G400400 Sobic009G227500--Sobic010G034200 Sobic009G227500--Sobic007G061800 Sobic009G227500--Sobic002G395100 Sobic009G227500--Sobic008G075800 Sobic009G227500--Sobic001G222800 Sobic009G227500--Sobic006G234400 Sobic009G227500--Sobic010G177600 Sobic009G227500--Sobic006G219700 Sobic003G114800 Sobic003G114800 Sobic006G173400--Sobic003G114800 Sobic004G091000 Sobic004G091000 Sobic006G173400--Sobic004G091000 Sobic005G000200 Sobic005G000200 Sobic006G173400--Sobic005G000200 Sobic002G128700 Sobic002G128700 Sobic006G173400--Sobic002G128700 Sobic008G102850 Sobic008G102850 Sobic006G173400--Sobic008G102850 Sobic008G079200 Sobic008G079200 Sobic006G173400--Sobic008G079200 Sobic003G147700 Sobic003G147700 Sobic006G173400--Sobic003G147700 Sobic007G103000 Sobic007G103000 Sobic006G173400--Sobic007G103000 Sobic005G065300 Sobic005G065300 Sobic006G173400--Sobic005G065300 Sobic010G177600--Sobic007G061800 Sobic010G177600--Sobic008G075800 Sobic010G177600--Sobic001G222800 Sobic010G177600--Sobic010G118800 Sobic009G166000 Sobic009G166000 Sobic010G177600--Sobic009G166000 Sobic010G177600--Sobic004G331500 Sobic010G177600--Sobic006G234400 Sobic010G177600--Sobic009G227500 Sobic010G177600--Sobic007G222700
Octagon: transcription factors


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