Gene annotation
Transcriptome id Sobic.007G061800.1
Synonym ATSTP1, Sb07g004950, STP1
Functional annotation transporter family protein, putative, expressed
UniProt C5YHX3
Pfam PF07690
Panther DB PTHR23500 PTHR23500:SF74
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G11260 : sugar transporter 1
RAP-DB (Rice) LOC_Os08g08070.1 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a056183 , Zm00025a030010 , Zm00025a034851 , Zm00025a011155 , Zm00025a046980 , Zm00025a048377 , Zm00025a006257 , Zm00025a050081 , Zm00025a015345
Brachypodium KQJ82923 , KQK04292 , KQJ95161 , KQK17831 , KQK14067 , KQK20404 , PNT72210 , KQK21214 , KQJ89755 , KQK15772 , KQJ93434
Barley HORVU7Hr1G019280.4 , HORVU7Hr1G019280.1 , HORVU5Hr1G055850.2 , HORVU5Hr1G055850.3 , HORVU5Hr1G055850.1 , HORVU7Hr1G019280.3 , HORVU1Hr1G075970.6 , HORVU1Hr1G075970.5 , HORVU1Hr1G075970.4 , HORVU1Hr1G075970.3 , HORVU1Hr1G075970.2 , HORVU1Hr1G075970.1 , HORVU1Hr1G056010.3 , HORVU1Hr1G056010.1 , HORVU1Hr1G056010.7 , HORVU1Hr1G056010.6 , HORVU1Hr1G056010.5 , HORVU6Hr1G025520.1 , HORVU5Hr1G000380.1 , HORVU2Hr1G079790.1 , HORVU2Hr1G079790.2 , HORVU2Hr1G079790.3 , HORVU2Hr1G079790.4 , HORVU2Hr1G079790.6 , HORVU2Hr1G079790.7 , HORVU2Hr1G079790.8 , HORVU7Hr1G019240.1 , HORVU7Hr1G069030.1 , HORVU7Hr1G069030.3 , HORVU7Hr1G069030.2 , HORVU7Hr1G069030.5 , HORVU7Hr1G069030.4 , HORVU7Hr1G069030.6 , HORVU2Hr1G041080.8 , HORVU2Hr1G041080.3 , HORVU2Hr1G041080.2 , HORVU2Hr1G041080.1 , HORVU2Hr1G041080.7 , HORVU2Hr1G041080.6 , HORVU2Hr1G041080.5 , HORVU2Hr1G041080.4 , HORVU5Hr1G054140.5 , HORVU5Hr1G054140.4 , HORVU5Hr1G054140.3 , HORVU5Hr1G054140.2 , HORVU5Hr1G054140.1
Wheat TraesCS6D02G123300 , TraesCS5B02G001000 , TraesCS5D02G187100 , TraesCS3A02G475400 , TraesCS1A02G341100 , TraesCS2B02G339100 , TraesCS7B02G185800 , TraesCS4D02G341400 , TraesCS2A02G341400 , TraesCS2A02G205500 , TraesCS5B02G180800 , TraesCS7D02G286600 , TraesCS2B02G232900 , TraesCS5D02G001600 , TraesCS6A02G134000 , TraesCS7A02G288800 , TraesCS5A02G515200 , TraesCS6B02G162200 , TraesCS5A02G182600 , TraesCS4A02G314900 , TraesCS4B02G346400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G075800 - -
2 Sobic.010G118800 - -
3 Sobic.001G222800 expressed protein -
4 Sobic.010G177600 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
5 Sobic.001G364700 glycosyl transferase 8 domain containing protein, putative, expressed -
6 Sobic.007G222700 - -
7 Sobic.006G234400 DUF617 domain containing protein, expressed -
8 Sobic.009G227500 aspartyl protease family protein, putative, expressed -
9 Sobic.010G034200 pectate lyase precursor, putative, expressed K01728: pectate lyase
10 Sobic.005G000200 lipase, putative, expressed -
11 Sobic.001G400400 pectinesterase, putative, expressed K01051: pectinesterase
12 Sobic.009G166000 IQ calmodulin-binding motif domain containing protein, expressed -
13 Sobic.004G287200 OsSub26 - Putative Subtilisin homologue, expressed -
14 Sobic.004G331500 similar to Cation-transporting ATPase(PubMedID : 29862293)@ATPase 8, plasma membrane-type, putative, expressed K01535: PMA1, H+-transporting ATPase
15 Sobic.008G079200 OsCML28 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
16 Sobic.006G173400 actin-depolymerizing factor, putative, expressed K05765: cofilin
17 Sobic.003G114800 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
18 Sobic.004G091000 pectate lyase precursor, putative, expressed K01728: pectate lyase
19 Sobic.003G197500 protein kinase domain containing protein, putative, expressed -
20 Sobic.009G165900 protein kinase APK1B, chloroplast precursor, putative, expressed -


Gene co-expression network
sample Sobic007G061800 Sobic007G061800 Sobic008G075800 Sobic008G075800 Sobic007G061800--Sobic008G075800 Sobic010G118800 Sobic010G118800 Sobic007G061800--Sobic010G118800 Sobic001G222800 Sobic001G222800 Sobic007G061800--Sobic001G222800 Sobic010G177600 Sobic010G177600 Sobic007G061800--Sobic010G177600 Sobic001G364700 Sobic001G364700 Sobic007G061800--Sobic001G364700 Sobic007G222700 Sobic007G222700 Sobic007G061800--Sobic007G222700 Sobic006G234400 Sobic006G234400 Sobic007G061800--Sobic006G234400 Sobic009G227500 Sobic009G227500 Sobic007G061800--Sobic009G227500 Sobic010G034200 Sobic010G034200 Sobic007G061800--Sobic010G034200 Sobic008G075800--Sobic007G061800 Sobic008G075800--Sobic001G222800 Sobic008G075800--Sobic010G118800 Sobic008G075800--Sobic010G177600 Sobic004G331500 Sobic004G331500 Sobic008G075800--Sobic004G331500 Sobic009G166000 Sobic009G166000 Sobic008G075800--Sobic009G166000 Sobic004G287200 Sobic004G287200 Sobic008G075800--Sobic004G287200 Sobic008G075800--Sobic007G222700 Sobic008G075800--Sobic010G034200 Sobic010G118800--Sobic001G364700 Sobic010G118800--Sobic007G222700 Sobic010G118800--Sobic007G061800 Sobic010G118800--Sobic001G222800 Sobic005G000200 Sobic005G000200 Sobic010G118800--Sobic005G000200 Sobic010G118800--Sobic008G075800 Sobic010G118800--Sobic010G177600 Sobic005G009700 Sobic005G009700 Sobic010G118800--Sobic005G009700 Sobic001G539820 Sobic001G539820 Sobic010G118800--Sobic001G539820 Sobic001G222800--Sobic008G075800 Sobic001G222800--Sobic007G061800 Sobic001G222800--Sobic010G118800 Sobic001G222800--Sobic010G177600 Sobic001G222800--Sobic004G287200 Sobic001G222800--Sobic007G222700 Sobic001G222800--Sobic001G364700 Sobic001G222800--Sobic004G331500 Sobic001G222800--Sobic006G234400 Sobic010G177600--Sobic007G061800 Sobic010G177600--Sobic008G075800 Sobic010G177600--Sobic001G222800 Sobic010G177600--Sobic010G118800 Sobic010G177600--Sobic009G166000 Sobic010G177600--Sobic004G331500 Sobic010G177600--Sobic006G234400 Sobic010G177600--Sobic009G227500 Sobic010G177600--Sobic007G222700 Sobic001G364700--Sobic010G118800 Sobic001G364700--Sobic005G000200 Sobic001G364700--Sobic001G539820 Sobic001G364700--Sobic005G009700 Sobic001G364700--Sobic007G222700 Sobic001G364700--Sobic007G061800 Sobic002G128700 Sobic002G128700 Sobic001G364700--Sobic002G128700 Sobic003G114800 Sobic003G114800 Sobic001G364700--Sobic003G114800 Sobic002G225800 Sobic002G225800 Sobic001G364700--Sobic002G225800 Sobic007G222700--Sobic010G118800 Sobic007G222700--Sobic001G364700 Sobic007G222700--Sobic002G225800 Sobic007G222700--Sobic005G000200 Sobic007G148233 Sobic007G148233 Sobic007G222700--Sobic007G148233 Sobic007G222700--Sobic005G009700 Sobic007G222700--Sobic001G222800 Sobic007G222700--Sobic007G061800 Sobic007G222700--Sobic001G539820 Sobic006G234400--Sobic007G061800 Sobic001G400400 Sobic001G400400 Sobic006G234400--Sobic001G400400 Sobic006G234400--Sobic001G222800 Sobic006G234400--Sobic010G034200 Sobic003G197500 Sobic003G197500 Sobic006G234400--Sobic003G197500 Sobic009G253700 Sobic009G253700 Sobic006G234400--Sobic009G253700 Sobic006G234400--Sobic009G227500 Sobic006G173400 Sobic006G173400 Sobic006G234400--Sobic006G173400 Sobic006G234400--Sobic010G177600 Sobic009G227500--Sobic001G400400 Sobic009G227500--Sobic010G034200 Sobic009G227500--Sobic007G061800 Sobic002G395100 Sobic002G395100 Sobic009G227500--Sobic002G395100 Sobic009G227500--Sobic008G075800 Sobic009G227500--Sobic001G222800 Sobic009G227500--Sobic006G234400 Sobic009G227500--Sobic010G177600 Sobic006G219700 Sobic006G219700 Sobic009G227500--Sobic006G219700 Sobic010G034200--Sobic001G400400 Sobic010G034200--Sobic009G227500 Sobic010G034200--Sobic002G395100 Sobic010G034200--Sobic006G219700 Sobic010G034200--Sobic007G061800 Sobic010G034200--Sobic008G075800 Sobic010G034200--Sobic006G234400 Sobic009G259600 Sobic009G259600 Sobic010G034200--Sobic009G259600 Sobic010G034200--Sobic001G222800
Octagon: transcription factors


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