Gene annotation
Transcriptome id Sobic.004G331500.1
Synonym Sb04g036040, HA8, AHA8
Functional annotation similar to Cation-transporting ATPase (PubMedID : 29862293)
ATPase 8, plasma membrane-type, putative, expressed
UniProt C5XUH7
Pfam PF00690 PF00702 PF00122
Panther DB PTHR24093 PTHR24093:SF320
NCBI CDD -
KEGG Orthology K01535; PMA1, H+-transporting ATPase
Gene Ontology GO:0000166; nucleotide binding


Orthologs (automatic annotation)
TAIR AT3G42640 : H(+)-ATPase 8
RAP-DB (Rice) LOC_Os02g55400.1 : ATPase 8, plasma membrane-type, putative, expressed
MaizeGDB (Corn) Zm00025a030928 , Zm00025a057250 , Zm00025a049797 , Zm00025a032923 , Zm00025a051359 , Zm00025a000410 , Zm00025a058079 , Zm00025a042055 , Zm00025a009469 , Zm00025a000078
Brachypodium PNT69345 , PNT76376 , KQK23282 , KQK20491 , KQK01162 , KQJ95742
Barley HORVU7Hr1G114340.10 , HORVU5Hr1G000780.12 , HORVU5Hr1G000780.13 , HORVU5Hr1G000780.10 , HORVU5Hr1G000780.11 , HORVU5Hr1G000780.17 , HORVU5Hr1G000780.14 , HORVU5Hr1G000780.15 , HORVU5Hr1G000780.18 , HORVU5Hr1G000780.19 , HORVU4Hr1G077430.1 , HORVU4Hr1G077430.3 , HORVU4Hr1G077430.2 , HORVU4Hr1G077430.4 , HORVU4Hr1G077430.7 , HORVU4Hr1G077430.6 , HORVU5Hr1G000780.21 , HORVU5Hr1G000780.20 , HORVU5Hr1G000780.1 , HORVU5Hr1G000780.2 , HORVU5Hr1G000780.3 , HORVU5Hr1G000780.6 , HORVU5Hr1G000780.7 , HORVU1Hr1G063560.31 , HORVU1Hr1G063560.30 , HORVU1Hr1G063560.6 , HORVU1Hr1G063560.9 , HORVU1Hr1G063560.8 , HORVU1Hr1G063560.3 , HORVU1Hr1G063560.2 , HORVU1Hr1G063560.1 , HORVU1Hr1G063560.7 , HORVU1Hr1G063560.5 , HORVU1Hr1G063560.4 , HORVU0Hr1G017350.8 , HORVU0Hr1G017350.9 , HORVU0Hr1G017350.6 , HORVU0Hr1G017350.7 , HORVU0Hr1G017350.4 , HORVU0Hr1G017350.5 , HORVU0Hr1G017350.2 , HORVU0Hr1G017350.3 , HORVU0Hr1G017350.1 , HORVU1Hr1G063560.22 , HORVU1Hr1G063560.23 , HORVU1Hr1G063560.20 , HORVU1Hr1G063560.21 , HORVU1Hr1G063560.26 , HORVU1Hr1G063560.27 , HORVU1Hr1G063560.24 , HORVU1Hr1G063560.25 , HORVU1Hr1G063560.28 , HORVU1Hr1G063560.29 , HORVU5Hr1G000780.8 , HORVU5Hr1G000780.9 , HORVU5Hr1G000780.4 , HORVU5Hr1G000780.5 , HORVU7Hr1G114340.8 , HORVU7Hr1G114340.9 , HORVU7Hr1G114340.4 , HORVU7Hr1G114340.5 , HORVU7Hr1G114340.6 , HORVU7Hr1G114340.7 , HORVU7Hr1G114340.1 , HORVU7Hr1G114340.2 , HORVU7Hr1G114340.3 , HORVU1Hr1G063560.19 , HORVU1Hr1G063560.18 , HORVU1Hr1G063560.13 , HORVU1Hr1G063560.12 , HORVU1Hr1G063560.11 , HORVU1Hr1G063560.10 , HORVU1Hr1G063560.17 , HORVU1Hr1G063560.16 , HORVU1Hr1G063560.15 , HORVU1Hr1G063560.14
Wheat TraesCS4B02G300000 , TraesCS4B02G300000 , TraesCS1B02G268800 , TraesCS6B02G393400 , TraesCS4D02G298900 , TraesCS4D02G298900 , TraesCS4D02G298900 , TraesCS4D02G298900 , TraesCS4A02G005000 , TraesCS1A02G258300 , TraesCS7D02G500200 , TraesCS7A02G145400 , TraesCSU02G073200 , TraesCS4B02G376400 , TraesCS6D02G344000 , TraesCS7B02G421700 , TraesCS4A02G005000 , TraesCS5A02G543300 , TraesCS5A02G004200 , TraesCS7A02G510800 , TraesCS7D02G146700 , TraesCS7B02G047600 , TraesCS5A02G004300 , TraesCS1D02G257600 , TraesCSU02G073200 , TraesCSU02G073200 , TraesCSU02G073200 , TraesCSU02G073200 , TraesCSU02G073200 , TraesCSU02G073200 , TraesCS6A02G360500 , TraesCS5D02G013100 , TraesCS5D02G013100
Populus PNS93896 , PNT32424 , PNT32423


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cDNA sequences
Sobic.004G331500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G166000 IQ calmodulin-binding motif domain containing protein, expressed -
2 Sobic.008G075800 - -
3 Sobic.004G287200 OsSub26 - Putative Subtilisin homologue, expressed -
4 Sobic.009G165900 protein kinase APK1B, chloroplast precursor, putative, expressed -
5 Sobic.001G222800 expressed protein -
6 Sobic.007G061800 transporter family protein, putative, expressed -
7 Sobic.010G177600 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
8 Sobic.004G336401 - -
9 Sobic.001G202900 expressed protein -
10 Sobic.010G254100 protein kinase APK1B, chloroplast precursor, putative, expressed -
11 Sobic.010G118800 - -
12 Sobic.010G034300 pectate lyase precursor, putative, expressed K01728: pectate lyase
13 Sobic.009G227500 aspartyl protease family protein, putative, expressed -
14 Sobic.002G405300 START domain containing protein, expressed -
15 Sobic.010G034200 pectate lyase precursor, putative, expressed K01728: pectate lyase
16 Sobic.009G167201 - -
17 Sobic.007G222700 - -
18 Sobic.008G097800 CAMK_CAMK_like.47 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
19 Sobic.005G209300 GRAS family transcription factor domain containing protein, expressed -
20 Sobic.006G234400 DUF617 domain containing protein, expressed -


Gene co-expression network
sample Sobic004G331500 Sobic004G331500 Sobic009G166000 Sobic009G166000 Sobic004G331500--Sobic009G166000 Sobic008G075800 Sobic008G075800 Sobic004G331500--Sobic008G075800 Sobic004G287200 Sobic004G287200 Sobic004G331500--Sobic004G287200 Sobic009G165900 Sobic009G165900 Sobic004G331500--Sobic009G165900 Sobic001G222800 Sobic001G222800 Sobic004G331500--Sobic001G222800 Sobic007G061800 Sobic007G061800 Sobic004G331500--Sobic007G061800 Sobic010G177600 Sobic010G177600 Sobic004G331500--Sobic010G177600 Sobic004G336401 Sobic004G336401 Sobic004G331500--Sobic004G336401 Sobic001G202900 Sobic001G202900 Sobic004G331500--Sobic001G202900 Sobic009G166000--Sobic004G331500 Sobic009G166000--Sobic008G075800 Sobic009G166000--Sobic010G177600 Sobic009G166000--Sobic004G287200 Sobic009G166000--Sobic007G061800 Sobic009G166000--Sobic001G222800 Sobic009G166000--Sobic009G165900 Sobic010G034200 Sobic010G034200 Sobic009G166000--Sobic010G034200 Sobic009G167201 Sobic009G167201 Sobic009G166000--Sobic009G167201 Sobic008G075800--Sobic007G061800 Sobic008G075800--Sobic001G222800 Sobic010G118800 Sobic010G118800 Sobic008G075800--Sobic010G118800 Sobic008G075800--Sobic010G177600 Sobic008G075800--Sobic004G331500 Sobic008G075800--Sobic009G166000 Sobic008G075800--Sobic004G287200 Sobic007G222700 Sobic007G222700 Sobic008G075800--Sobic007G222700 Sobic008G075800--Sobic010G034200 Sobic004G287200--Sobic001G222800 Sobic004G287200--Sobic004G331500 Sobic004G287200--Sobic008G075800 Sobic004G287200--Sobic009G166000 Sobic004G287200--Sobic007G061800 Sobic004G287200--Sobic010G177600 Sobic004G287200--Sobic009G165900 Sobic004G287200--Sobic010G118800 Sobic009G227500 Sobic009G227500 Sobic004G287200--Sobic009G227500 Sobic009G165900--Sobic004G331500 Sobic009G165900--Sobic004G336401 Sobic010G254100 Sobic010G254100 Sobic009G165900--Sobic010G254100 Sobic009G165900--Sobic008G075800 Sobic009G165900--Sobic001G202900 Sobic009G165900--Sobic009G166000 Sobic008G097800 Sobic008G097800 Sobic009G165900--Sobic008G097800 Sobic010G034300 Sobic010G034300 Sobic009G165900--Sobic010G034300 Sobic009G165900--Sobic004G287200 Sobic001G222800--Sobic008G075800 Sobic001G222800--Sobic007G061800 Sobic001G222800--Sobic010G118800 Sobic001G222800--Sobic010G177600 Sobic001G222800--Sobic004G287200 Sobic001G222800--Sobic007G222700 Sobic001G364700 Sobic001G364700 Sobic001G222800--Sobic001G364700 Sobic001G222800--Sobic004G331500 Sobic006G234400 Sobic006G234400 Sobic001G222800--Sobic006G234400 Sobic007G061800--Sobic008G075800 Sobic007G061800--Sobic010G118800 Sobic007G061800--Sobic001G222800 Sobic007G061800--Sobic010G177600 Sobic007G061800--Sobic001G364700 Sobic007G061800--Sobic007G222700 Sobic007G061800--Sobic006G234400 Sobic007G061800--Sobic009G227500 Sobic007G061800--Sobic010G034200 Sobic010G177600--Sobic007G061800 Sobic010G177600--Sobic008G075800 Sobic010G177600--Sobic001G222800 Sobic010G177600--Sobic010G118800 Sobic010G177600--Sobic009G166000 Sobic010G177600--Sobic004G331500 Sobic010G177600--Sobic006G234400 Sobic010G177600--Sobic009G227500 Sobic010G177600--Sobic007G222700 Sobic004G336401--Sobic010G254100 Sobic004G336401--Sobic008G097800 Sobic005G035200 Sobic005G035200 Sobic004G336401--Sobic005G035200 Sobic002G145400 Sobic002G145400 Sobic004G336401--Sobic002G145400 Sobic004G336401--Sobic010G034300 Sobic007G221932 Sobic007G221932 Sobic004G336401--Sobic007G221932 Sobic009G252000 Sobic009G252000 Sobic004G336401--Sobic009G252000 Sobic009G091000 Sobic009G091000 Sobic004G336401--Sobic009G091000 Sobic004G024800 Sobic004G024800 Sobic004G336401--Sobic004G024800 Sobic001G202900--Sobic009G165900 Sobic001G202900--Sobic004G331500 Sobic001G202900--Sobic010G034300 Sobic001G202900--Sobic004G336401 Sobic001G202900--Sobic010G254100 Sobic001G202900--Sobic008G097800 Sobic001G202900--Sobic009G166000 Sobic001G202900--Sobic008G075800 Sobic001G202900--Sobic004G287200
Octagon: transcription factors


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