Gene annotation
Transcriptome id Sobic.008G097800.1
Synonym Sb08g014910, CPK1, ATCPK1
Functional annotation CAMK_CAMK_like.47 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt A0A1B6PCU8
Pfam PF07714 PF13499
Panther DB PTHR24349 PTHR24349:SF164
NCBI CDD KOG0032; Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
KEGG Orthology K13412; calcium-dependent protein kinase
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G04870 : calcium dependent protein kinase 1
RAP-DB (Rice) LOC_Os12g30150.1 : CAMK_CAMK_like.47 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a016143 , Zm00025a039821 , Zm00025a027150 , Zm00025a039723 , Zm00025a013707 , Zm00025a024833 , Zm00025a025734 , Zm00025a033981 , Zm00025a008491 , Zm00025a012860 , Zm00025a016615 , Zm00025a016612 , Zm00025a032700 , Zm00025a008488 , Zm00025a054043 , Zm00025a056693 , Zm00025a010059
Brachypodium KQJ91880 , KQK12833 , KQJ89241 , KQJ92400 , KQK00812 , KQJ86709 , KQK05644 , KQK10184
Barley HORVU6Hr1G066470.9 , HORVU6Hr1G066470.8 , HORVU6Hr1G066470.5 , HORVU6Hr1G066470.4 , HORVU6Hr1G066470.1 , HORVU6Hr1G066470.2 , HORVU3Hr1G079040.5 , HORVU3Hr1G079040.4 , HORVU3Hr1G079040.7 , HORVU3Hr1G079040.6 , HORVU3Hr1G079040.1 , HORVU3Hr1G079040.3 , HORVU3Hr1G079040.2 , HORVU4Hr1G026640.1 , HORVU4Hr1G026640.5 , HORVU6Hr1G066470.11 , HORVU6Hr1G066470.10 , HORVU6Hr1G066470.13 , HORVU6Hr1G066470.14 , HORVU6Hr1G066470.17 , HORVU6Hr1G066470.16 , HORVU2Hr1G058530.4 , HORVU2Hr1G058530.1 , HORVU2Hr1G058530.3 , HORVU2Hr1G058530.2 , HORVU4Hr1G004540.9 , HORVU4Hr1G004540.8 , HORVU4Hr1G004540.3 , HORVU4Hr1G004540.1 , HORVU4Hr1G004540.19 , HORVU4Hr1G004540.18 , HORVU4Hr1G004540.10 , HORVU4Hr1G004540.17 , HORVU4Hr1G004540.14 , HORVU4Hr1G026640.4 , HORVU6Hr1G066470.15 , HORVU7Hr1G010570.1 , HORVU7Hr1G010570.2 , HORVU4Hr1G004540.20 , HORVU4Hr1G019530.8 , HORVU4Hr1G019530.4 , HORVU4Hr1G019530.6 , HORVU4Hr1G019530.7 , HORVU4Hr1G019530.1 , HORVU4Hr1G019530.2 , HORVU4Hr1G019530.3 , HORVU5Hr1G044550.1 , HORVU5Hr1G044550.3 , HORVU5Hr1G044550.2 , HORVU5Hr1G030810.3 , HORVU5Hr1G030810.2 , HORVU5Hr1G030810.1 , HORVU5Hr1G030810.6 , HORVU5Hr1G030810.5 , HORVU5Hr1G030810.4 , HORVU7Hr1G010490.22 , HORVU7Hr1G010490.23 , HORVU7Hr1G010490.24 , HORVU7Hr1G010490.25
Wheat TraesCS5D02G153800 , TraesCS5B02G109300 , TraesCS4A02G187900 , TraesCS4D02G125500 , TraesCS5A02G107900 , TraesCS5A02G107900 , TraesCS5A02G107900 , TraesCS5A02G107900 , TraesCS4B02G030100 , TraesCS4A02G432300 , TraesCS6B02G467300 , TraesCS6D02G404800 , TraesCS7D02G052900 , TraesCS4B02G030100 , TraesCSU02G091900 , TraesCS4B02G109800 , TraesCS5D02G124000 , TraesCS4B02G109800 , TraesCS6B02G288600 , TraesCS5D02G122800 , TraesCS4D02G107200 , TraesCS6A02G261200 , TraesCS4A02G206200 , TraesCS4A02G206200 , TraesCS5B02G115400 , TraesCS5B02G115400 , TraesCS5D02G122800 , TraesCS6D02G242000 , TraesCS6D02G242000 , TraesCS1D02G308800 , TraesCS1D02G308800 , TraesCS6A02G421000 , TraesCS4B02G130300 , TraesCS5D02G122800 , TraesCS5D02G122800 , TraesCS5A02G138300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G221932 - -
2 Sobic.004G336401 - -
3 Sobic.009G091000 TKL_IRAK_CrRLK1L-1.11 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
4 Sobic.009G252000 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
5 Sobic.010G254100 protein kinase APK1B, chloroplast precursor, putative, expressed -
6 Sobic.010G034300 pectate lyase precursor, putative, expressed K01728: pectate lyase
7 Sobic.005G035200 - -
8 Sobic.002G145400 octicosapeptide/Phox/Bem1p, putative, expressed -
9 Sobic.004G024800 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
10 Sobic.001G351600 hydrolase protein, putative, expressed -
11 Sobic.007G080100 DNA binding protein, putative, expressed -
12 Sobic.008G011901 - K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
13 Sobic.001G036200 - -
14 Sobic.001G539880 - -
15 Sobic.001G466100 glycosyl hydrolase family 10 protein, putative, expressed -
16 Sobic.009G165900 protein kinase APK1B, chloroplast precursor, putative, expressed -
17 Sobic.003G195400 - -
18 Sobic.005G035250 - -
19 Sobic.007G148233 - -
20 Sobic.005G023400 pollen allergen Cyn d 23, putative, expressed -


Gene co-expression network
sample Sobic008G097800 Sobic008G097800 Sobic007G221932 Sobic007G221932 Sobic008G097800--Sobic007G221932 Sobic004G336401 Sobic004G336401 Sobic008G097800--Sobic004G336401 Sobic009G091000 Sobic009G091000 Sobic008G097800--Sobic009G091000 Sobic009G252000 Sobic009G252000 Sobic008G097800--Sobic009G252000 Sobic010G254100 Sobic010G254100 Sobic008G097800--Sobic010G254100 Sobic010G034300 Sobic010G034300 Sobic008G097800--Sobic010G034300 Sobic005G035200 Sobic005G035200 Sobic008G097800--Sobic005G035200 Sobic002G145400 Sobic002G145400 Sobic008G097800--Sobic002G145400 Sobic004G024800 Sobic004G024800 Sobic008G097800--Sobic004G024800 Sobic007G221932--Sobic009G091000 Sobic007G221932--Sobic008G097800 Sobic007G221932--Sobic009G252000 Sobic007G221932--Sobic005G035200 Sobic007G221932--Sobic002G145400 Sobic007G221932--Sobic004G336401 Sobic007G221932--Sobic010G254100 Sobic007G221932--Sobic010G034300 Sobic007G080100 Sobic007G080100 Sobic007G221932--Sobic007G080100 Sobic004G336401--Sobic010G254100 Sobic004G336401--Sobic008G097800 Sobic004G336401--Sobic005G035200 Sobic004G336401--Sobic002G145400 Sobic004G336401--Sobic010G034300 Sobic004G336401--Sobic007G221932 Sobic004G336401--Sobic009G252000 Sobic004G336401--Sobic009G091000 Sobic004G336401--Sobic004G024800 Sobic009G091000--Sobic009G252000 Sobic009G091000--Sobic007G221932 Sobic009G091000--Sobic008G097800 Sobic009G091000--Sobic010G034300 Sobic009G091000--Sobic010G254100 Sobic009G091000--Sobic004G336401 Sobic001G466100 Sobic001G466100 Sobic009G091000--Sobic001G466100 Sobic001G351600 Sobic001G351600 Sobic009G091000--Sobic001G351600 Sobic009G091000--Sobic005G035200 Sobic009G252000--Sobic009G091000 Sobic009G252000--Sobic007G221932 Sobic009G252000--Sobic008G097800 Sobic009G252000--Sobic010G034300 Sobic009G252000--Sobic010G254100 Sobic009G252000--Sobic004G336401 Sobic009G252000--Sobic001G466100 Sobic009G252000--Sobic005G035200 Sobic009G252000--Sobic002G145400 Sobic010G254100--Sobic004G336401 Sobic010G254100--Sobic008G097800 Sobic010G254100--Sobic010G034300 Sobic010G254100--Sobic009G252000 Sobic010G254100--Sobic007G221932 Sobic010G254100--Sobic009G091000 Sobic010G254100--Sobic005G035200 Sobic010G254100--Sobic002G145400 Sobic001G036200 Sobic001G036200 Sobic010G254100--Sobic001G036200 Sobic010G034300--Sobic009G252000 Sobic010G034300--Sobic010G254100 Sobic010G034300--Sobic008G097800 Sobic010G034300--Sobic009G091000 Sobic010G034300--Sobic004G336401 Sobic010G034300--Sobic007G221932 Sobic010G034300--Sobic001G466100 Sobic010G034300--Sobic002G145400 Sobic010G034300--Sobic005G035200 Sobic005G035200--Sobic004G024800 Sobic005G035200--Sobic002G145400 Sobic005G035200--Sobic004G336401 Sobic005G035200--Sobic007G221932 Sobic001G539880 Sobic001G539880 Sobic005G035200--Sobic001G539880 Sobic005G035200--Sobic008G097800 Sobic003G195400 Sobic003G195400 Sobic005G035200--Sobic003G195400 Sobic005G035200--Sobic007G080100 Sobic007G148233 Sobic007G148233 Sobic005G035200--Sobic007G148233 Sobic002G145400--Sobic005G035200 Sobic002G145400--Sobic008G097800 Sobic002G145400--Sobic004G336401 Sobic002G145400--Sobic007G221932 Sobic002G145400--Sobic004G024800 Sobic002G145400--Sobic010G254100 Sobic002G145400--Sobic007G080100 Sobic002G145400--Sobic009G091000 Sobic002G145400--Sobic003G195400 Sobic004G024800--Sobic001G539880 Sobic004G024800--Sobic005G035200 Sobic004G024800--Sobic007G080100 Sobic004G024800--Sobic003G195400 Sobic004G024800--Sobic007G148233 Sobic008G011901 Sobic008G011901 Sobic004G024800--Sobic008G011901 Sobic004G024800--Sobic002G145400 Sobic004G024800--Sobic007G221932 Sobic005G035250 Sobic005G035250 Sobic004G024800--Sobic005G035250
Octagon: transcription factors


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