Gene annotation
Transcriptome id Sobic.009G165900.1
Synonym Sb09g022780
Functional annotation protein kinase APK1B, chloroplast precursor, putative, expressed
UniProt C5YZB8
Pfam PF07714
Panther DB PTHR27001 PTHR27001:SF209
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G07070 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os05g38770.1 : protein kinase APK1B, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a043917 , Zm00025a037720 , Zm00025a027259
Brachypodium KQK05859
Barley HORVU1Hr1G071750.3 , HORVU1Hr1G071750.2 , HORVU1Hr1G071750.1 , HORVU1Hr1G071750.4
Wheat TraesCS1A02G287900 , TraesCS1A02G287900 , TraesCS3B02G141500 , TraesCS3D02G124200 , TraesCS1D02G286800 , TraesCS1B02G297300
Populus -


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cDNA sequences
Sobic.009G165900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G331500 similar to Cation-transporting ATPase(PubMedID : 29862293)@ATPase 8, plasma membrane-type, putative, expressed K01535: PMA1, H+-transporting ATPase
2 Sobic.004G336401 - -
3 Sobic.010G254100 protein kinase APK1B, chloroplast precursor, putative, expressed -
4 Sobic.008G075800 - -
5 Sobic.001G202900 expressed protein -
6 Sobic.009G166000 IQ calmodulin-binding motif domain containing protein, expressed -
7 Sobic.008G097800 CAMK_CAMK_like.47 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
8 Sobic.010G034300 pectate lyase precursor, putative, expressed K01728: pectate lyase
9 Sobic.004G287200 OsSub26 - Putative Subtilisin homologue, expressed -
10 Sobic.001G222800 expressed protein -
11 Sobic.007G061800 transporter family protein, putative, expressed -
12 Sobic.002G145400 octicosapeptide/Phox/Bem1p, putative, expressed -
13 Sobic.010G118800 - -
14 Sobic.010G177600 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
15 Sobic.005G035200 - -
16 Sobic.009G252000 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
17 Sobic.007G222700 - -
18 Sobic.007G221932 - -
19 Sobic.009G091000 TKL_IRAK_CrRLK1L-1.11 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
20 Sobic.001G364700 glycosyl transferase 8 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic009G165900 Sobic009G165900 Sobic004G331500 Sobic004G331500 Sobic009G165900--Sobic004G331500 Sobic004G336401 Sobic004G336401 Sobic009G165900--Sobic004G336401 Sobic010G254100 Sobic010G254100 Sobic009G165900--Sobic010G254100 Sobic008G075800 Sobic008G075800 Sobic009G165900--Sobic008G075800 Sobic001G202900 Sobic001G202900 Sobic009G165900--Sobic001G202900 Sobic009G166000 Sobic009G166000 Sobic009G165900--Sobic009G166000 Sobic008G097800 Sobic008G097800 Sobic009G165900--Sobic008G097800 Sobic010G034300 Sobic010G034300 Sobic009G165900--Sobic010G034300 Sobic004G287200 Sobic004G287200 Sobic009G165900--Sobic004G287200 Sobic004G331500--Sobic009G166000 Sobic004G331500--Sobic008G075800 Sobic004G331500--Sobic004G287200 Sobic004G331500--Sobic009G165900 Sobic001G222800 Sobic001G222800 Sobic004G331500--Sobic001G222800 Sobic007G061800 Sobic007G061800 Sobic004G331500--Sobic007G061800 Sobic010G177600 Sobic010G177600 Sobic004G331500--Sobic010G177600 Sobic004G331500--Sobic004G336401 Sobic004G331500--Sobic001G202900 Sobic004G336401--Sobic010G254100 Sobic004G336401--Sobic008G097800 Sobic005G035200 Sobic005G035200 Sobic004G336401--Sobic005G035200 Sobic002G145400 Sobic002G145400 Sobic004G336401--Sobic002G145400 Sobic004G336401--Sobic010G034300 Sobic007G221932 Sobic007G221932 Sobic004G336401--Sobic007G221932 Sobic009G252000 Sobic009G252000 Sobic004G336401--Sobic009G252000 Sobic009G091000 Sobic009G091000 Sobic004G336401--Sobic009G091000 Sobic004G024800 Sobic004G024800 Sobic004G336401--Sobic004G024800 Sobic010G254100--Sobic004G336401 Sobic010G254100--Sobic008G097800 Sobic010G254100--Sobic010G034300 Sobic010G254100--Sobic009G252000 Sobic010G254100--Sobic007G221932 Sobic010G254100--Sobic009G091000 Sobic010G254100--Sobic005G035200 Sobic010G254100--Sobic002G145400 Sobic001G036200 Sobic001G036200 Sobic010G254100--Sobic001G036200 Sobic008G075800--Sobic007G061800 Sobic008G075800--Sobic001G222800 Sobic010G118800 Sobic010G118800 Sobic008G075800--Sobic010G118800 Sobic008G075800--Sobic010G177600 Sobic008G075800--Sobic004G331500 Sobic008G075800--Sobic009G166000 Sobic008G075800--Sobic004G287200 Sobic007G222700 Sobic007G222700 Sobic008G075800--Sobic007G222700 Sobic010G034200 Sobic010G034200 Sobic008G075800--Sobic010G034200 Sobic001G202900--Sobic009G165900 Sobic001G202900--Sobic004G331500 Sobic001G202900--Sobic010G034300 Sobic001G202900--Sobic004G336401 Sobic001G202900--Sobic010G254100 Sobic001G202900--Sobic008G097800 Sobic001G202900--Sobic009G166000 Sobic001G202900--Sobic008G075800 Sobic001G202900--Sobic004G287200 Sobic009G166000--Sobic004G331500 Sobic009G166000--Sobic008G075800 Sobic009G166000--Sobic010G177600 Sobic009G166000--Sobic004G287200 Sobic009G166000--Sobic007G061800 Sobic009G166000--Sobic001G222800 Sobic009G166000--Sobic009G165900 Sobic009G166000--Sobic010G034200 Sobic009G167201 Sobic009G167201 Sobic009G166000--Sobic009G167201 Sobic008G097800--Sobic007G221932 Sobic008G097800--Sobic004G336401 Sobic008G097800--Sobic009G091000 Sobic008G097800--Sobic009G252000 Sobic008G097800--Sobic010G254100 Sobic008G097800--Sobic010G034300 Sobic008G097800--Sobic005G035200 Sobic008G097800--Sobic002G145400 Sobic008G097800--Sobic004G024800 Sobic010G034300--Sobic009G252000 Sobic010G034300--Sobic010G254100 Sobic010G034300--Sobic008G097800 Sobic010G034300--Sobic009G091000 Sobic010G034300--Sobic004G336401 Sobic010G034300--Sobic007G221932 Sobic001G466100 Sobic001G466100 Sobic010G034300--Sobic001G466100 Sobic010G034300--Sobic002G145400 Sobic010G034300--Sobic005G035200 Sobic004G287200--Sobic001G222800 Sobic004G287200--Sobic004G331500 Sobic004G287200--Sobic008G075800 Sobic004G287200--Sobic009G166000 Sobic004G287200--Sobic007G061800 Sobic004G287200--Sobic010G177600 Sobic004G287200--Sobic009G165900 Sobic004G287200--Sobic010G118800 Sobic009G227500 Sobic009G227500 Sobic004G287200--Sobic009G227500
Octagon: transcription factors


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