Gene annotation
Transcriptome id Sobic.010G177600.1
Synonym Sb10g022940
Functional annotation glucan endo-1,3-beta-glucosidase precursor, putative, expressed
UniProt C5Z573
Pfam PF07983 PF00332
Panther DB PTHR32227 PTHR32227:SF76
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G64790 : O-Glycosyl hydrolases family 17 protein
RAP-DB (Rice) LOC_Os06g39060.1 : glucan endo-1,3-beta-glucosidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a051265 , Zm00025a018944
Brachypodium KQK17850
Barley HORVU6Hr1G091770.1 , HORVU3Hr1G110450.1 , HORVU3Hr1G110450.2
Wheat TraesCS5A02G429600 , TraesCS5D02G437700 , TraesCS3A02G499400 , TraesCS5B02G431600
Populus -


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cDNA sequences
Sobic.010G177600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G061800 transporter family protein, putative, expressed -
2 Sobic.008G075800 - -
3 Sobic.001G222800 expressed protein -
4 Sobic.010G118800 - -
5 Sobic.009G166000 IQ calmodulin-binding motif domain containing protein, expressed -
6 Sobic.004G331500 similar to Cation-transporting ATPase(PubMedID : 29862293)@ATPase 8, plasma membrane-type, putative, expressed K01535: PMA1, H+-transporting ATPase
7 Sobic.006G234400 DUF617 domain containing protein, expressed -
8 Sobic.009G227500 aspartyl protease family protein, putative, expressed -
9 Sobic.007G222700 - -
10 Sobic.004G287200 OsSub26 - Putative Subtilisin homologue, expressed -
11 Sobic.001G364700 glycosyl transferase 8 domain containing protein, putative, expressed -
12 Sobic.010G034200 pectate lyase precursor, putative, expressed K01728: pectate lyase
13 Sobic.001G400400 pectinesterase, putative, expressed K01051: pectinesterase
14 Sobic.009G165900 protein kinase APK1B, chloroplast precursor, putative, expressed -
15 Sobic.005G000200 lipase, putative, expressed -
16 Sobic.009G167201 - -
17 Sobic.008G079200 OsCML28 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
18 Sobic.004G336401 - -
19 Sobic.001G139400 - -
20 Sobic.006G173400 actin-depolymerizing factor, putative, expressed K05765: cofilin


Gene co-expression network
sample Sobic010G177600 Sobic010G177600 Sobic007G061800 Sobic007G061800 Sobic010G177600--Sobic007G061800 Sobic008G075800 Sobic008G075800 Sobic010G177600--Sobic008G075800 Sobic001G222800 Sobic001G222800 Sobic010G177600--Sobic001G222800 Sobic010G118800 Sobic010G118800 Sobic010G177600--Sobic010G118800 Sobic009G166000 Sobic009G166000 Sobic010G177600--Sobic009G166000 Sobic004G331500 Sobic004G331500 Sobic010G177600--Sobic004G331500 Sobic006G234400 Sobic006G234400 Sobic010G177600--Sobic006G234400 Sobic009G227500 Sobic009G227500 Sobic010G177600--Sobic009G227500 Sobic007G222700 Sobic007G222700 Sobic010G177600--Sobic007G222700 Sobic007G061800--Sobic008G075800 Sobic007G061800--Sobic010G118800 Sobic007G061800--Sobic001G222800 Sobic007G061800--Sobic010G177600 Sobic001G364700 Sobic001G364700 Sobic007G061800--Sobic001G364700 Sobic007G061800--Sobic007G222700 Sobic007G061800--Sobic006G234400 Sobic007G061800--Sobic009G227500 Sobic010G034200 Sobic010G034200 Sobic007G061800--Sobic010G034200 Sobic008G075800--Sobic007G061800 Sobic008G075800--Sobic001G222800 Sobic008G075800--Sobic010G118800 Sobic008G075800--Sobic010G177600 Sobic008G075800--Sobic004G331500 Sobic008G075800--Sobic009G166000 Sobic004G287200 Sobic004G287200 Sobic008G075800--Sobic004G287200 Sobic008G075800--Sobic007G222700 Sobic008G075800--Sobic010G034200 Sobic001G222800--Sobic008G075800 Sobic001G222800--Sobic007G061800 Sobic001G222800--Sobic010G118800 Sobic001G222800--Sobic010G177600 Sobic001G222800--Sobic004G287200 Sobic001G222800--Sobic007G222700 Sobic001G222800--Sobic001G364700 Sobic001G222800--Sobic004G331500 Sobic001G222800--Sobic006G234400 Sobic010G118800--Sobic001G364700 Sobic010G118800--Sobic007G222700 Sobic010G118800--Sobic007G061800 Sobic010G118800--Sobic001G222800 Sobic005G000200 Sobic005G000200 Sobic010G118800--Sobic005G000200 Sobic010G118800--Sobic008G075800 Sobic010G118800--Sobic010G177600 Sobic005G009700 Sobic005G009700 Sobic010G118800--Sobic005G009700 Sobic001G539820 Sobic001G539820 Sobic010G118800--Sobic001G539820 Sobic009G166000--Sobic004G331500 Sobic009G166000--Sobic008G075800 Sobic009G166000--Sobic010G177600 Sobic009G166000--Sobic004G287200 Sobic009G166000--Sobic007G061800 Sobic009G166000--Sobic001G222800 Sobic009G165900 Sobic009G165900 Sobic009G166000--Sobic009G165900 Sobic009G166000--Sobic010G034200 Sobic009G167201 Sobic009G167201 Sobic009G166000--Sobic009G167201 Sobic004G331500--Sobic009G166000 Sobic004G331500--Sobic008G075800 Sobic004G331500--Sobic004G287200 Sobic004G331500--Sobic009G165900 Sobic004G331500--Sobic001G222800 Sobic004G331500--Sobic007G061800 Sobic004G331500--Sobic010G177600 Sobic004G336401 Sobic004G336401 Sobic004G331500--Sobic004G336401 Sobic001G202900 Sobic001G202900 Sobic004G331500--Sobic001G202900 Sobic006G234400--Sobic007G061800 Sobic001G400400 Sobic001G400400 Sobic006G234400--Sobic001G400400 Sobic006G234400--Sobic001G222800 Sobic006G234400--Sobic010G034200 Sobic003G197500 Sobic003G197500 Sobic006G234400--Sobic003G197500 Sobic009G253700 Sobic009G253700 Sobic006G234400--Sobic009G253700 Sobic006G234400--Sobic009G227500 Sobic006G173400 Sobic006G173400 Sobic006G234400--Sobic006G173400 Sobic006G234400--Sobic010G177600 Sobic009G227500--Sobic001G400400 Sobic009G227500--Sobic010G034200 Sobic009G227500--Sobic007G061800 Sobic002G395100 Sobic002G395100 Sobic009G227500--Sobic002G395100 Sobic009G227500--Sobic008G075800 Sobic009G227500--Sobic001G222800 Sobic009G227500--Sobic006G234400 Sobic009G227500--Sobic010G177600 Sobic006G219700 Sobic006G219700 Sobic009G227500--Sobic006G219700 Sobic007G222700--Sobic010G118800 Sobic007G222700--Sobic001G364700 Sobic002G225800 Sobic002G225800 Sobic007G222700--Sobic002G225800 Sobic007G222700--Sobic005G000200 Sobic007G148233 Sobic007G148233 Sobic007G222700--Sobic007G148233 Sobic007G222700--Sobic005G009700 Sobic007G222700--Sobic001G222800 Sobic007G222700--Sobic007G061800 Sobic007G222700--Sobic001G539820
Octagon: transcription factors


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