Gene annotation
Transcriptome id Sobic.010G254100.1
Synonym Sb10g029180
Functional annotation protein kinase APK1B, chloroplast precursor, putative, expressed
UniProt A0A194YLD0
Pfam PF00069
Panther DB PTHR27001 PTHR27001:SF122
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G07180 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os06g48980.1 : protein kinase APK1B, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a027237 , Zm00025a056803 , Zm00025a018394 , Zm00025a041769 , Zm00025a006844 , Zm00025a018728 , Zm00025a000914 , Zm00025a032271 , Zm00025a053364 , Zm00025a035043 , Zm00025a002811
Brachypodium KQK07880 , KQJ96794 , KQJ84062 , KQJ84063 , KQK23335 , PNT67415 , PNT61665 , PNT61664 , KQK17431
Barley HORVU0Hr1G039910.2 , HORVU2Hr1G095970.9 , HORVU2Hr1G095970.2 , HORVU2Hr1G095970.3 , HORVU2Hr1G095970.1 , HORVU2Hr1G095970.4 , HORVU7Hr1G096510.1 , HORVU2Hr1G095970.10 , HORVU2Hr1G095970.12 , HORVU2Hr1G095970.13 , HORVU6Hr1G064690.4 , HORVU2Hr1G095950.1 , HORVU2Hr1G095950.2 , HORVU6Hr1G064690.15 , HORVU6Hr1G064690.14 , HORVU6Hr1G064690.13 , HORVU6Hr1G064690.12 , HORVU6Hr1G064690.11 , HORVU6Hr1G064690.10 , HORVU6Hr1G064690.7 , HORVU6Hr1G064690.6 , HORVU6Hr1G064690.5 , HORVU6Hr1G064690.3 , HORVU6Hr1G064690.2 , HORVU6Hr1G064690.9 , HORVU6Hr1G064690.8 , HORVU7Hr1G096400.4 , HORVU7Hr1G096400.2 , HORVU7Hr1G096400.3 , HORVU7Hr1G096400.1 , HORVU0Hr1G007070.2 , HORVU0Hr1G007070.3 , HORVU0Hr1G007070.1 , HORVU4Hr1G076520.3 , HORVU4Hr1G076520.5
Wheat TraesCS4D02G000300 , TraesCS1A02G138100 , TraesCS6D02G235300 , TraesCS7B02G316100 , TraesCS2B02G422500 , TraesCS2B02G422500 , TraesCS7D02G409400 , TraesCS6B02G271700 , TraesCS4A02G000300 , TraesCS6A02G253700 , TraesCS2A02G404600 , TraesCS7B02G376400 , TraesCS2D02G401500 , TraesCS2D02G401500 , TraesCS2D02G401500 , TraesCS4B02G294300 , TraesCS4A02G010000 , TraesCS4B02G000300 , TraesCS4D02G293200 , TraesCS7A02G416100
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G336401 - -
2 Sobic.008G097800 CAMK_CAMK_like.47 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
3 Sobic.010G034300 pectate lyase precursor, putative, expressed K01728: pectate lyase
4 Sobic.009G252000 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
5 Sobic.007G221932 - -
6 Sobic.009G091000 TKL_IRAK_CrRLK1L-1.11 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
7 Sobic.005G035200 - -
8 Sobic.002G145400 octicosapeptide/Phox/Bem1p, putative, expressed -
9 Sobic.001G036200 - -
10 Sobic.009G165900 protein kinase APK1B, chloroplast precursor, putative, expressed -
11 Sobic.007G080100 DNA binding protein, putative, expressed -
12 Sobic.001G466100 glycosyl hydrolase family 10 protein, putative, expressed -
13 Sobic.004G024800 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
14 Sobic.001G351600 hydrolase protein, putative, expressed -
15 Sobic.008G011901 - K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
16 Sobic.004G331500 similar to Cation-transporting ATPase(PubMedID : 29862293)@ATPase 8, plasma membrane-type, putative, expressed K01535: PMA1, H+-transporting ATPase
17 Sobic.001G539880 - -
18 Sobic.001G202900 expressed protein -
19 Sobic.003G195400 - -
20 Sobic.007G222700 - -


Gene co-expression network
sample Sobic010G254100 Sobic010G254100 Sobic004G336401 Sobic004G336401 Sobic010G254100--Sobic004G336401 Sobic008G097800 Sobic008G097800 Sobic010G254100--Sobic008G097800 Sobic010G034300 Sobic010G034300 Sobic010G254100--Sobic010G034300 Sobic009G252000 Sobic009G252000 Sobic010G254100--Sobic009G252000 Sobic007G221932 Sobic007G221932 Sobic010G254100--Sobic007G221932 Sobic009G091000 Sobic009G091000 Sobic010G254100--Sobic009G091000 Sobic005G035200 Sobic005G035200 Sobic010G254100--Sobic005G035200 Sobic002G145400 Sobic002G145400 Sobic010G254100--Sobic002G145400 Sobic001G036200 Sobic001G036200 Sobic010G254100--Sobic001G036200 Sobic004G336401--Sobic010G254100 Sobic004G336401--Sobic008G097800 Sobic004G336401--Sobic005G035200 Sobic004G336401--Sobic002G145400 Sobic004G336401--Sobic010G034300 Sobic004G336401--Sobic007G221932 Sobic004G336401--Sobic009G252000 Sobic004G336401--Sobic009G091000 Sobic004G024800 Sobic004G024800 Sobic004G336401--Sobic004G024800 Sobic008G097800--Sobic007G221932 Sobic008G097800--Sobic004G336401 Sobic008G097800--Sobic009G091000 Sobic008G097800--Sobic009G252000 Sobic008G097800--Sobic010G254100 Sobic008G097800--Sobic010G034300 Sobic008G097800--Sobic005G035200 Sobic008G097800--Sobic002G145400 Sobic008G097800--Sobic004G024800 Sobic010G034300--Sobic009G252000 Sobic010G034300--Sobic010G254100 Sobic010G034300--Sobic008G097800 Sobic010G034300--Sobic009G091000 Sobic010G034300--Sobic004G336401 Sobic010G034300--Sobic007G221932 Sobic001G466100 Sobic001G466100 Sobic010G034300--Sobic001G466100 Sobic010G034300--Sobic002G145400 Sobic010G034300--Sobic005G035200 Sobic009G252000--Sobic009G091000 Sobic009G252000--Sobic007G221932 Sobic009G252000--Sobic008G097800 Sobic009G252000--Sobic010G034300 Sobic009G252000--Sobic010G254100 Sobic009G252000--Sobic004G336401 Sobic009G252000--Sobic001G466100 Sobic009G252000--Sobic005G035200 Sobic009G252000--Sobic002G145400 Sobic007G221932--Sobic009G091000 Sobic007G221932--Sobic008G097800 Sobic007G221932--Sobic009G252000 Sobic007G221932--Sobic005G035200 Sobic007G221932--Sobic002G145400 Sobic007G221932--Sobic004G336401 Sobic007G221932--Sobic010G254100 Sobic007G221932--Sobic010G034300 Sobic007G080100 Sobic007G080100 Sobic007G221932--Sobic007G080100 Sobic009G091000--Sobic009G252000 Sobic009G091000--Sobic007G221932 Sobic009G091000--Sobic008G097800 Sobic009G091000--Sobic010G034300 Sobic009G091000--Sobic010G254100 Sobic009G091000--Sobic004G336401 Sobic009G091000--Sobic001G466100 Sobic001G351600 Sobic001G351600 Sobic009G091000--Sobic001G351600 Sobic009G091000--Sobic005G035200 Sobic005G035200--Sobic004G024800 Sobic005G035200--Sobic002G145400 Sobic005G035200--Sobic004G336401 Sobic005G035200--Sobic007G221932 Sobic001G539880 Sobic001G539880 Sobic005G035200--Sobic001G539880 Sobic005G035200--Sobic008G097800 Sobic003G195400 Sobic003G195400 Sobic005G035200--Sobic003G195400 Sobic005G035200--Sobic007G080100 Sobic007G148233 Sobic007G148233 Sobic005G035200--Sobic007G148233 Sobic002G145400--Sobic005G035200 Sobic002G145400--Sobic008G097800 Sobic002G145400--Sobic004G336401 Sobic002G145400--Sobic007G221932 Sobic002G145400--Sobic004G024800 Sobic002G145400--Sobic010G254100 Sobic002G145400--Sobic007G080100 Sobic002G145400--Sobic009G091000 Sobic002G145400--Sobic003G195400 Sobic001G036200--Sobic010G254100 Sobic001G036200--Sobic009G091000 Sobic001G036200--Sobic009G252000 Sobic001G036200--Sobic007G221932 Sobic001G036200--Sobic010G034300 Sobic001G036200--Sobic008G097800 Sobic001G036200--Sobic001G466100 Sobic001G036200--Sobic001G351600 Sobic001G036200--Sobic004G336401
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.