Gene annotation
Transcriptome id Sobic.001G036200.1
Synonym Sb01g003370
Functional annotation -
UniProt C5WV26
Pfam -
Panther DB PTHR31248 PTHR31248:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g60470.1 : glycine-rich protein A3, putative, expressed
MaizeGDB (Corn) Zm00025a016444
Brachypodium -
Barley -
Wheat TraesCS5D02G487300 , TraesCS5A02G474500 , TraesCS5B02G487800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G254100 protein kinase APK1B, chloroplast precursor, putative, expressed -
2 Sobic.009G091000 TKL_IRAK_CrRLK1L-1.11 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
3 Sobic.009G252000 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
4 Sobic.007G221932 - -
5 Sobic.010G034300 pectate lyase precursor, putative, expressed K01728: pectate lyase
6 Sobic.008G097800 CAMK_CAMK_like.47 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
7 Sobic.001G466100 glycosyl hydrolase family 10 protein, putative, expressed -
8 Sobic.001G351600 hydrolase protein, putative, expressed -
9 Sobic.004G336401 - -
10 Sobic.007G080100 DNA binding protein, putative, expressed -
11 Sobic.005G035200 - -
12 Sobic.002G145400 octicosapeptide/Phox/Bem1p, putative, expressed -
13 Sobic.008G011901 - K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
14 Sobic.008G099000 protein of unknown function domain containing protein, expressed -
15 Sobic.004G024800 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
16 Sobic.002G405300 START domain containing protein, expressed -
17 Sobic.004G222400 DEF7 - Defensin and Defensin-like DEFL family, expressed -
18 Sobic.009G165900 protein kinase APK1B, chloroplast precursor, putative, expressed -
19 Sobic.001G539880 - -
20 Sobic.005G023400 pollen allergen Cyn d 23, putative, expressed -


Gene co-expression network
sample Sobic001G036200 Sobic001G036200 Sobic010G254100 Sobic010G254100 Sobic001G036200--Sobic010G254100 Sobic009G091000 Sobic009G091000 Sobic001G036200--Sobic009G091000 Sobic009G252000 Sobic009G252000 Sobic001G036200--Sobic009G252000 Sobic007G221932 Sobic007G221932 Sobic001G036200--Sobic007G221932 Sobic010G034300 Sobic010G034300 Sobic001G036200--Sobic010G034300 Sobic008G097800 Sobic008G097800 Sobic001G036200--Sobic008G097800 Sobic001G466100 Sobic001G466100 Sobic001G036200--Sobic001G466100 Sobic001G351600 Sobic001G351600 Sobic001G036200--Sobic001G351600 Sobic004G336401 Sobic004G336401 Sobic001G036200--Sobic004G336401 Sobic010G254100--Sobic004G336401 Sobic010G254100--Sobic008G097800 Sobic010G254100--Sobic010G034300 Sobic010G254100--Sobic009G252000 Sobic010G254100--Sobic007G221932 Sobic010G254100--Sobic009G091000 Sobic005G035200 Sobic005G035200 Sobic010G254100--Sobic005G035200 Sobic002G145400 Sobic002G145400 Sobic010G254100--Sobic002G145400 Sobic010G254100--Sobic001G036200 Sobic009G091000--Sobic009G252000 Sobic009G091000--Sobic007G221932 Sobic009G091000--Sobic008G097800 Sobic009G091000--Sobic010G034300 Sobic009G091000--Sobic010G254100 Sobic009G091000--Sobic004G336401 Sobic009G091000--Sobic001G466100 Sobic009G091000--Sobic001G351600 Sobic009G091000--Sobic005G035200 Sobic009G252000--Sobic009G091000 Sobic009G252000--Sobic007G221932 Sobic009G252000--Sobic008G097800 Sobic009G252000--Sobic010G034300 Sobic009G252000--Sobic010G254100 Sobic009G252000--Sobic004G336401 Sobic009G252000--Sobic001G466100 Sobic009G252000--Sobic005G035200 Sobic009G252000--Sobic002G145400 Sobic007G221932--Sobic009G091000 Sobic007G221932--Sobic008G097800 Sobic007G221932--Sobic009G252000 Sobic007G221932--Sobic005G035200 Sobic007G221932--Sobic002G145400 Sobic007G221932--Sobic004G336401 Sobic007G221932--Sobic010G254100 Sobic007G221932--Sobic010G034300 Sobic007G080100 Sobic007G080100 Sobic007G221932--Sobic007G080100 Sobic010G034300--Sobic009G252000 Sobic010G034300--Sobic010G254100 Sobic010G034300--Sobic008G097800 Sobic010G034300--Sobic009G091000 Sobic010G034300--Sobic004G336401 Sobic010G034300--Sobic007G221932 Sobic010G034300--Sobic001G466100 Sobic010G034300--Sobic002G145400 Sobic010G034300--Sobic005G035200 Sobic008G097800--Sobic007G221932 Sobic008G097800--Sobic004G336401 Sobic008G097800--Sobic009G091000 Sobic008G097800--Sobic009G252000 Sobic008G097800--Sobic010G254100 Sobic008G097800--Sobic010G034300 Sobic008G097800--Sobic005G035200 Sobic008G097800--Sobic002G145400 Sobic004G024800 Sobic004G024800 Sobic008G097800--Sobic004G024800 Sobic001G466100--Sobic009G252000 Sobic001G466100--Sobic009G091000 Sobic001G466100--Sobic010G034300 Sobic004G041800 Sobic004G041800 Sobic001G466100--Sobic004G041800 Sobic001G466100--Sobic010G254100 Sobic001G466100--Sobic008G097800 Sobic001G466100--Sobic007G221932 Sobic001G466100--Sobic001G036200 Sobic010G176400 Sobic010G176400 Sobic001G466100--Sobic010G176400 Sobic001G351600--Sobic009G091000 Sobic001G351600--Sobic007G221932 Sobic001G351600--Sobic009G252000 Sobic001G351600--Sobic008G097800 Sobic001G351600--Sobic007G080100 Sobic001G351600--Sobic010G034300 Sobic001G351600--Sobic010G254100 Sobic001G351600--Sobic005G035200 Sobic008G011901 Sobic008G011901 Sobic001G351600--Sobic008G011901 Sobic004G336401--Sobic010G254100 Sobic004G336401--Sobic008G097800 Sobic004G336401--Sobic005G035200 Sobic004G336401--Sobic002G145400 Sobic004G336401--Sobic010G034300 Sobic004G336401--Sobic007G221932 Sobic004G336401--Sobic009G252000 Sobic004G336401--Sobic009G091000 Sobic004G336401--Sobic004G024800
Octagon: transcription factors


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