Gene annotation
Transcriptome id Sobic.002G405300.5,Sobic.002G405300.4,Sobic.002G405300.3
Synonym Sb02g041955
Functional annotation START domain containing protein, expressed
UniProt A0A1W0W7P0 , A0A1W0W7Q0 , A0A1W0W7S6
Pfam PF01852 PF07059
Panther DB PTHR12136 PTHR12136:SF64
NCBI CDD KOG2761; START domain-containing proteins involved in steroidogenesis/phosphatidylcholine transfer
KEGG Orthology -
Gene Ontology GO:0008289; lipid binding


Orthologs (automatic annotation)
TAIR AT5G45560 : Pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein
RAP-DB (Rice) LOC_Os02g01270.1 : START domain containing protein, expressed
MaizeGDB (Corn) Zm00025a035094 , Zm00025a018634 , Zm00025a015360 , Zm00025a041316
Brachypodium PNT65658 , KQK19815 , KQK19816 , KQK19817
Barley HORVU7Hr1G008800.20 , HORVU7Hr1G008800.21 , HORVU7Hr1G008800.22 , HORVU7Hr1G008800.23 , HORVU6Hr1G002050.9 , HORVU6Hr1G002050.8 , HORVU6Hr1G002050.5 , HORVU6Hr1G002050.4 , HORVU6Hr1G002050.7 , HORVU6Hr1G002050.6 , HORVU6Hr1G002050.1 , HORVU6Hr1G002050.3 , HORVU6Hr1G002050.2 , HORVU7Hr1G008800.19 , HORVU7Hr1G008800.18 , HORVU7Hr1G008800.11 , HORVU7Hr1G008800.10 , HORVU7Hr1G008800.13 , HORVU7Hr1G008800.12 , HORVU7Hr1G008800.15 , HORVU7Hr1G008800.14 , HORVU7Hr1G008800.17 , HORVU7Hr1G008800.16 , HORVU6Hr1G002050.11 , HORVU6Hr1G002050.10 , HORVU6Hr1G002050.13 , HORVU6Hr1G002050.12 , HORVU7Hr1G008800.9 , HORVU7Hr1G008800.8 , HORVU7Hr1G008800.5 , HORVU7Hr1G008800.4 , HORVU7Hr1G008800.7 , HORVU7Hr1G008800.6 , HORVU7Hr1G008800.3 , HORVU7Hr1G008800.2
Wheat TraesCS6D02G007600 , TraesCS6D02G007600 , TraesCS7D02G045000 , TraesCS6A02G005000 , TraesCS6A02G005000 , TraesCS7A02G050100 , TraesCS7A02G050100 , TraesCS4A02G437200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G331500 similar to Cation-transporting ATPase(PubMedID : 29862293)@ATPase 8, plasma membrane-type, putative, expressed K01535: PMA1, H+-transporting ATPase
2 Sobic.004G287200 OsSub26 - Putative Subtilisin homologue, expressed -
3 Sobic.001G036200 - -
4 Sobic.010G254100 protein kinase APK1B, chloroplast precursor, putative, expressed -
5 Sobic.004G336401 - -
6 Sobic.009G166000 IQ calmodulin-binding motif domain containing protein, expressed -
7 Sobic.009G165900 protein kinase APK1B, chloroplast precursor, putative, expressed -
8 Sobic.008G075800 - -
9 Sobic.010G034300 pectate lyase precursor, putative, expressed K01728: pectate lyase
10 Sobic.004G185000 STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed -
11 Sobic.001G222800 expressed protein -
12 Sobic.010G177600 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
13 Sobic.008G097800 CAMK_CAMK_like.47 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
14 Sobic.009G252000 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
15 Sobic.007G061800 transporter family protein, putative, expressed -
16 Sobic.001G202900 expressed protein -
17 Sobic.009G227500 aspartyl protease family protein, putative, expressed -
18 Sobic.007G222700 - -
19 Sobic.001G466100 glycosyl hydrolase family 10 protein, putative, expressed -
20 Sobic.010G118800 - -


Gene co-expression network
sample Sobic002G405300 Sobic002G405300 Sobic004G331500 Sobic004G331500 Sobic002G405300--Sobic004G331500 Sobic004G287200 Sobic004G287200 Sobic002G405300--Sobic004G287200 Sobic001G036200 Sobic001G036200 Sobic002G405300--Sobic001G036200 Sobic010G254100 Sobic010G254100 Sobic002G405300--Sobic010G254100 Sobic004G336401 Sobic004G336401 Sobic002G405300--Sobic004G336401 Sobic009G166000 Sobic009G166000 Sobic002G405300--Sobic009G166000 Sobic009G165900 Sobic009G165900 Sobic002G405300--Sobic009G165900 Sobic008G075800 Sobic008G075800 Sobic002G405300--Sobic008G075800 Sobic010G034300 Sobic010G034300 Sobic002G405300--Sobic010G034300 Sobic004G331500--Sobic009G166000 Sobic004G331500--Sobic008G075800 Sobic004G331500--Sobic004G287200 Sobic004G331500--Sobic009G165900 Sobic001G222800 Sobic001G222800 Sobic004G331500--Sobic001G222800 Sobic007G061800 Sobic007G061800 Sobic004G331500--Sobic007G061800 Sobic010G177600 Sobic010G177600 Sobic004G331500--Sobic010G177600 Sobic004G331500--Sobic004G336401 Sobic001G202900 Sobic001G202900 Sobic004G331500--Sobic001G202900 Sobic004G287200--Sobic001G222800 Sobic004G287200--Sobic004G331500 Sobic004G287200--Sobic008G075800 Sobic004G287200--Sobic009G166000 Sobic004G287200--Sobic007G061800 Sobic004G287200--Sobic010G177600 Sobic004G287200--Sobic009G165900 Sobic010G118800 Sobic010G118800 Sobic004G287200--Sobic010G118800 Sobic009G227500 Sobic009G227500 Sobic004G287200--Sobic009G227500 Sobic001G036200--Sobic010G254100 Sobic009G091000 Sobic009G091000 Sobic001G036200--Sobic009G091000 Sobic009G252000 Sobic009G252000 Sobic001G036200--Sobic009G252000 Sobic007G221932 Sobic007G221932 Sobic001G036200--Sobic007G221932 Sobic001G036200--Sobic010G034300 Sobic008G097800 Sobic008G097800 Sobic001G036200--Sobic008G097800 Sobic001G466100 Sobic001G466100 Sobic001G036200--Sobic001G466100 Sobic001G351600 Sobic001G351600 Sobic001G036200--Sobic001G351600 Sobic001G036200--Sobic004G336401 Sobic010G254100--Sobic004G336401 Sobic010G254100--Sobic008G097800 Sobic010G254100--Sobic010G034300 Sobic010G254100--Sobic009G252000 Sobic010G254100--Sobic007G221932 Sobic010G254100--Sobic009G091000 Sobic005G035200 Sobic005G035200 Sobic010G254100--Sobic005G035200 Sobic002G145400 Sobic002G145400 Sobic010G254100--Sobic002G145400 Sobic010G254100--Sobic001G036200 Sobic004G336401--Sobic010G254100 Sobic004G336401--Sobic008G097800 Sobic004G336401--Sobic005G035200 Sobic004G336401--Sobic002G145400 Sobic004G336401--Sobic010G034300 Sobic004G336401--Sobic007G221932 Sobic004G336401--Sobic009G252000 Sobic004G336401--Sobic009G091000 Sobic004G024800 Sobic004G024800 Sobic004G336401--Sobic004G024800 Sobic009G166000--Sobic004G331500 Sobic009G166000--Sobic008G075800 Sobic009G166000--Sobic010G177600 Sobic009G166000--Sobic004G287200 Sobic009G166000--Sobic007G061800 Sobic009G166000--Sobic001G222800 Sobic009G166000--Sobic009G165900 Sobic010G034200 Sobic010G034200 Sobic009G166000--Sobic010G034200 Sobic009G167201 Sobic009G167201 Sobic009G166000--Sobic009G167201 Sobic009G165900--Sobic004G331500 Sobic009G165900--Sobic004G336401 Sobic009G165900--Sobic010G254100 Sobic009G165900--Sobic008G075800 Sobic009G165900--Sobic001G202900 Sobic009G165900--Sobic009G166000 Sobic009G165900--Sobic008G097800 Sobic009G165900--Sobic010G034300 Sobic009G165900--Sobic004G287200 Sobic008G075800--Sobic007G061800 Sobic008G075800--Sobic001G222800 Sobic008G075800--Sobic010G118800 Sobic008G075800--Sobic010G177600 Sobic008G075800--Sobic004G331500 Sobic008G075800--Sobic009G166000 Sobic008G075800--Sobic004G287200 Sobic007G222700 Sobic007G222700 Sobic008G075800--Sobic007G222700 Sobic008G075800--Sobic010G034200 Sobic010G034300--Sobic009G252000 Sobic010G034300--Sobic010G254100 Sobic010G034300--Sobic008G097800 Sobic010G034300--Sobic009G091000 Sobic010G034300--Sobic004G336401 Sobic010G034300--Sobic007G221932 Sobic010G034300--Sobic001G466100 Sobic010G034300--Sobic002G145400 Sobic010G034300--Sobic005G035200
Octagon: transcription factors


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