Gene annotation
Transcriptome id Sobic.001G466100.1
Synonym Sb01g043730
Functional annotation glycosyl hydrolase family 10 protein, putative, expressed
UniProt C5WTT5
Pfam PF00331
Panther DB PTHR31490 PTHR31490:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT4G33860 : Glycosyl hydrolase family 10 protein
RAP-DB (Rice) LOC_Os03g10469.2 : glycosyl hydrolase family 10 protein, putative, expressed
MaizeGDB (Corn) Zm00025a001161 , Zm00025a003966 , Zm00025a053145
Brachypodium KQK23061 , PNT67306
Barley HORVU4Hr1G070310.20 , HORVU4Hr1G070310.21 , HORVU4Hr1G070310.22 , HORVU4Hr1G070310.19 , HORVU4Hr1G070310.18 , HORVU4Hr1G070310.11 , HORVU4Hr1G070310.13 , HORVU4Hr1G070310.12 , HORVU4Hr1G070310.15 , HORVU4Hr1G070310.14 , HORVU2Hr1G113150.1 , HORVU4Hr1G070260.11 , HORVU4Hr1G070260.10 , HORVU4Hr1G070260.13 , HORVU4Hr1G070260.12 , HORVU4Hr1G070260.15 , HORVU4Hr1G070260.14 , HORVU5Hr1G056740.4 , HORVU5Hr1G056740.3 , HORVU5Hr1G056740.2 , HORVU5Hr1G056740.1
Wheat TraesCS4B02G259100 , TraesCS4D02G259100 , TraesCS5D02G194800 , TraesCS4D02G259500 , TraesCSU02G021800 , TraesCS5A02G196500 , TraesCS2B02G537100 , TraesCS4B02G259400 , TraesCS5A02G196600 , TraesCS1B02G124500 , TraesCS4A02G045500
Populus -


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cDNA sequences
Sobic.001G466100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G252000 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
2 Sobic.009G091000 TKL_IRAK_CrRLK1L-1.11 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
3 Sobic.010G034300 pectate lyase precursor, putative, expressed K01728: pectate lyase
4 Sobic.004G041800 expressed protein -
5 Sobic.010G254100 protein kinase APK1B, chloroplast precursor, putative, expressed -
6 Sobic.008G097800 CAMK_CAMK_like.47 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
7 Sobic.007G221932 - -
8 Sobic.001G036200 - -
9 Sobic.010G176400 pectate lyase precursor, putative, expressed K01728: pectate lyase
10 Sobic.004G080000 polygalacturonase, putative, expressed K01213: galacturan 1,4-alpha-galacturonidase
11 Sobic.001G351600 hydrolase protein, putative, expressed -
12 Sobic.008G099000 protein of unknown function domain containing protein, expressed -
13 Sobic.004G336401 - -
14 Sobic.003G329600 CAMK_CAMK_like.10 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
15 Sobic.004G222400 DEF7 - Defensin and Defensin-like DEFL family, expressed -
16 Sobic.002G145400 octicosapeptide/Phox/Bem1p, putative, expressed -
17 Sobic.010G141001 - -
18 Sobic.005G035200 - -
19 Sobic.005G209300 GRAS family transcription factor domain containing protein, expressed -
20 Sobic.009G165900 protein kinase APK1B, chloroplast precursor, putative, expressed -


Gene co-expression network
sample Sobic001G466100 Sobic001G466100 Sobic009G252000 Sobic009G252000 Sobic001G466100--Sobic009G252000 Sobic009G091000 Sobic009G091000 Sobic001G466100--Sobic009G091000 Sobic010G034300 Sobic010G034300 Sobic001G466100--Sobic010G034300 Sobic004G041800 Sobic004G041800 Sobic001G466100--Sobic004G041800 Sobic010G254100 Sobic010G254100 Sobic001G466100--Sobic010G254100 Sobic008G097800 Sobic008G097800 Sobic001G466100--Sobic008G097800 Sobic007G221932 Sobic007G221932 Sobic001G466100--Sobic007G221932 Sobic001G036200 Sobic001G036200 Sobic001G466100--Sobic001G036200 Sobic010G176400 Sobic010G176400 Sobic001G466100--Sobic010G176400 Sobic009G252000--Sobic009G091000 Sobic009G252000--Sobic007G221932 Sobic009G252000--Sobic008G097800 Sobic009G252000--Sobic010G034300 Sobic009G252000--Sobic010G254100 Sobic004G336401 Sobic004G336401 Sobic009G252000--Sobic004G336401 Sobic009G252000--Sobic001G466100 Sobic005G035200 Sobic005G035200 Sobic009G252000--Sobic005G035200 Sobic002G145400 Sobic002G145400 Sobic009G252000--Sobic002G145400 Sobic009G091000--Sobic009G252000 Sobic009G091000--Sobic007G221932 Sobic009G091000--Sobic008G097800 Sobic009G091000--Sobic010G034300 Sobic009G091000--Sobic010G254100 Sobic009G091000--Sobic004G336401 Sobic009G091000--Sobic001G466100 Sobic001G351600 Sobic001G351600 Sobic009G091000--Sobic001G351600 Sobic009G091000--Sobic005G035200 Sobic010G034300--Sobic009G252000 Sobic010G034300--Sobic010G254100 Sobic010G034300--Sobic008G097800 Sobic010G034300--Sobic009G091000 Sobic010G034300--Sobic004G336401 Sobic010G034300--Sobic007G221932 Sobic010G034300--Sobic001G466100 Sobic010G034300--Sobic002G145400 Sobic010G034300--Sobic005G035200 Sobic004G080000 Sobic004G080000 Sobic004G041800--Sobic004G080000 Sobic004G041800--Sobic001G466100 Sobic007G146300 Sobic007G146300 Sobic004G041800--Sobic007G146300 Sobic010G276200 Sobic010G276200 Sobic004G041800--Sobic010G276200 Sobic005G209300 Sobic005G209300 Sobic004G041800--Sobic005G209300 Sobic004G041800--Sobic010G034300 Sobic004G041800--Sobic010G176400 Sobic004G041800--Sobic009G252000 Sobic004G041800--Sobic009G091000 Sobic010G254100--Sobic004G336401 Sobic010G254100--Sobic008G097800 Sobic010G254100--Sobic010G034300 Sobic010G254100--Sobic009G252000 Sobic010G254100--Sobic007G221932 Sobic010G254100--Sobic009G091000 Sobic010G254100--Sobic005G035200 Sobic010G254100--Sobic002G145400 Sobic010G254100--Sobic001G036200 Sobic008G097800--Sobic007G221932 Sobic008G097800--Sobic004G336401 Sobic008G097800--Sobic009G091000 Sobic008G097800--Sobic009G252000 Sobic008G097800--Sobic010G254100 Sobic008G097800--Sobic010G034300 Sobic008G097800--Sobic005G035200 Sobic008G097800--Sobic002G145400 Sobic004G024800 Sobic004G024800 Sobic008G097800--Sobic004G024800 Sobic007G221932--Sobic009G091000 Sobic007G221932--Sobic008G097800 Sobic007G221932--Sobic009G252000 Sobic007G221932--Sobic005G035200 Sobic007G221932--Sobic002G145400 Sobic007G221932--Sobic004G336401 Sobic007G221932--Sobic010G254100 Sobic007G221932--Sobic010G034300 Sobic007G080100 Sobic007G080100 Sobic007G221932--Sobic007G080100 Sobic001G036200--Sobic010G254100 Sobic001G036200--Sobic009G091000 Sobic001G036200--Sobic009G252000 Sobic001G036200--Sobic007G221932 Sobic001G036200--Sobic010G034300 Sobic001G036200--Sobic008G097800 Sobic001G036200--Sobic001G466100 Sobic001G036200--Sobic001G351600 Sobic001G036200--Sobic004G336401 Sobic003G329600 Sobic003G329600 Sobic010G176400--Sobic003G329600 Sobic010G141001 Sobic010G141001 Sobic010G176400--Sobic010G141001 Sobic003G255400 Sobic003G255400 Sobic010G176400--Sobic003G255400 Sobic004G222400 Sobic004G222400 Sobic010G176400--Sobic004G222400 Sobic001G539600 Sobic001G539600 Sobic010G176400--Sobic001G539600 Sobic008G099000 Sobic008G099000 Sobic010G176400--Sobic008G099000 Sobic010G089900 Sobic010G089900 Sobic010G176400--Sobic010G089900 Sobic010G176400--Sobic001G466100 Sobic002G273200 Sobic002G273200 Sobic010G176400--Sobic002G273200
Octagon: transcription factors


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