Gene annotation
Transcriptome id Sobic.005G209300.2
Synonym SCL14, ATGRAS2, GRAS2, Sb05g026273
Functional annotation GRAS family transcription factor domain containing protein, expressed
UniProt A0A1Z5RK72
Pfam PF03514
Panther DB PTHR31636 PTHR31636:SF59
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G07530 : SCARECROW-like 14
RAP-DB (Rice) LOC_Os11g47920.1 : SCARECROW, putative, expressed
MaizeGDB (Corn) Zm00025a029170 , Zm00025a029171
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G041800 expressed protein -
2 Sobic.004G080000 polygalacturonase, putative, expressed K01213: galacturan 1,4-alpha-galacturonidase
3 Sobic.004G331500 similar to Cation-transporting ATPase(PubMedID : 29862293)@ATPase 8, plasma membrane-type, putative, expressed K01535: PMA1, H+-transporting ATPase
4 Sobic.001G466100 glycosyl hydrolase family 10 protein, putative, expressed -
5 Sobic.007G146300 pectinesterase, putative, expressed -
6 Sobic.010G034300 pectate lyase precursor, putative, expressed K01728: pectate lyase
7 Sobic.009G165900 protein kinase APK1B, chloroplast precursor, putative, expressed -
8 Sobic.009G166000 IQ calmodulin-binding motif domain containing protein, expressed -
9 Sobic.010G254100 protein kinase APK1B, chloroplast precursor, putative, expressed -
10 Sobic.001G202900 expressed protein -
11 Sobic.009G252000 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
12 Sobic.004G336401 - -
13 Sobic.002G405300 START domain containing protein, expressed -
14 Sobic.004G287200 OsSub26 - Putative Subtilisin homologue, expressed -
15 Sobic.008G097800 CAMK_CAMK_like.47 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
16 Sobic.009G091000 TKL_IRAK_CrRLK1L-1.11 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
17 Sobic.010G276200 MLO domain containing protein, putative, expressed K08472: mlo protein
18 Sobic.001G036200 - -
19 Sobic.001G024250 - -
20 Sobic.002G323200 COBRA-like protein precursor, putative, expressed -


Gene co-expression network
sample Sobic005G209300 Sobic005G209300 Sobic004G041800 Sobic004G041800 Sobic005G209300--Sobic004G041800 Sobic004G080000 Sobic004G080000 Sobic005G209300--Sobic004G080000 Sobic004G331500 Sobic004G331500 Sobic005G209300--Sobic004G331500 Sobic001G466100 Sobic001G466100 Sobic005G209300--Sobic001G466100 Sobic007G146300 Sobic007G146300 Sobic005G209300--Sobic007G146300 Sobic010G034300 Sobic010G034300 Sobic005G209300--Sobic010G034300 Sobic009G165900 Sobic009G165900 Sobic005G209300--Sobic009G165900 Sobic009G166000 Sobic009G166000 Sobic005G209300--Sobic009G166000 Sobic010G254100 Sobic010G254100 Sobic005G209300--Sobic010G254100 Sobic004G041800--Sobic004G080000 Sobic004G041800--Sobic001G466100 Sobic004G041800--Sobic007G146300 Sobic010G276200 Sobic010G276200 Sobic004G041800--Sobic010G276200 Sobic004G041800--Sobic005G209300 Sobic004G041800--Sobic010G034300 Sobic010G176400 Sobic010G176400 Sobic004G041800--Sobic010G176400 Sobic009G252000 Sobic009G252000 Sobic004G041800--Sobic009G252000 Sobic009G091000 Sobic009G091000 Sobic004G041800--Sobic009G091000 Sobic004G080000--Sobic004G041800 Sobic004G080000--Sobic007G146300 Sobic004G080000--Sobic001G466100 Sobic004G080000--Sobic010G276200 Sobic005G023600 Sobic005G023600 Sobic004G080000--Sobic005G023600 Sobic004G080000--Sobic005G209300 Sobic004G080000--Sobic010G176400 Sobic004G123100 Sobic004G123100 Sobic004G080000--Sobic004G123100 Sobic003G329600 Sobic003G329600 Sobic004G080000--Sobic003G329600 Sobic004G331500--Sobic009G166000 Sobic008G075800 Sobic008G075800 Sobic004G331500--Sobic008G075800 Sobic004G287200 Sobic004G287200 Sobic004G331500--Sobic004G287200 Sobic004G331500--Sobic009G165900 Sobic001G222800 Sobic001G222800 Sobic004G331500--Sobic001G222800 Sobic007G061800 Sobic007G061800 Sobic004G331500--Sobic007G061800 Sobic010G177600 Sobic010G177600 Sobic004G331500--Sobic010G177600 Sobic004G336401 Sobic004G336401 Sobic004G331500--Sobic004G336401 Sobic001G202900 Sobic001G202900 Sobic004G331500--Sobic001G202900 Sobic001G466100--Sobic009G252000 Sobic001G466100--Sobic009G091000 Sobic001G466100--Sobic010G034300 Sobic001G466100--Sobic004G041800 Sobic001G466100--Sobic010G254100 Sobic008G097800 Sobic008G097800 Sobic001G466100--Sobic008G097800 Sobic007G221932 Sobic007G221932 Sobic001G466100--Sobic007G221932 Sobic001G036200 Sobic001G036200 Sobic001G466100--Sobic001G036200 Sobic001G466100--Sobic010G176400 Sobic007G146300--Sobic004G080000 Sobic007G146300--Sobic004G041800 Sobic007G146300--Sobic010G276200 Sobic007G146300--Sobic005G023600 Sobic007G146300--Sobic005G209300 Sobic007G146300--Sobic001G466100 Sobic001G024250 Sobic001G024250 Sobic007G146300--Sobic001G024250 Sobic007G146300--Sobic010G176400 Sobic006G105500 Sobic006G105500 Sobic007G146300--Sobic006G105500 Sobic010G034300--Sobic009G252000 Sobic010G034300--Sobic010G254100 Sobic010G034300--Sobic008G097800 Sobic010G034300--Sobic009G091000 Sobic010G034300--Sobic004G336401 Sobic010G034300--Sobic007G221932 Sobic010G034300--Sobic001G466100 Sobic002G145400 Sobic002G145400 Sobic010G034300--Sobic002G145400 Sobic005G035200 Sobic005G035200 Sobic010G034300--Sobic005G035200 Sobic009G165900--Sobic004G331500 Sobic009G165900--Sobic004G336401 Sobic009G165900--Sobic010G254100 Sobic009G165900--Sobic008G075800 Sobic009G165900--Sobic001G202900 Sobic009G165900--Sobic009G166000 Sobic009G165900--Sobic008G097800 Sobic009G165900--Sobic010G034300 Sobic009G165900--Sobic004G287200 Sobic009G166000--Sobic004G331500 Sobic009G166000--Sobic008G075800 Sobic009G166000--Sobic010G177600 Sobic009G166000--Sobic004G287200 Sobic009G166000--Sobic007G061800 Sobic009G166000--Sobic001G222800 Sobic009G166000--Sobic009G165900 Sobic010G034200 Sobic010G034200 Sobic009G166000--Sobic010G034200 Sobic009G167201 Sobic009G167201 Sobic009G166000--Sobic009G167201 Sobic010G254100--Sobic004G336401 Sobic010G254100--Sobic008G097800 Sobic010G254100--Sobic010G034300 Sobic010G254100--Sobic009G252000 Sobic010G254100--Sobic007G221932 Sobic010G254100--Sobic009G091000 Sobic010G254100--Sobic005G035200 Sobic010G254100--Sobic002G145400 Sobic010G254100--Sobic001G036200
Octagon: transcription factors


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